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CAKLQF020000006.1__CAH1079779.1__SAMEA5780031_01388__00031

Bact-Vir

CAKLQF020000006.1__CAH1079779.1__SAMEA5780031_01388__00031

Identity

Kingdom:
phage

Quality

96.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-153
PDB
Pfam (4)
AccessionNameScoreE-valueQ covHMM cov
PF01488.27 best Shikimate_DH 25.8 1.40e-05 76.3% 76.8%
PF10727.16 Rossmann-like 36.0 7.70e-09 73.7% 83.2%
PF03446.22 NAD_binding_2 23.5 7.30e-05 69.7% 65.6%
PF03807.24 F420_oxidored 47.0 4.50e-12 59.2% 94.7%
CATH (94)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d1lB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.95 93.0 9.06e-01 100.0% 95.7%
2i76A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.92 81.0 8.40e-01 100.0% 97.2%
2f1kA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.90 87.0 8.41e-01 100.0% 98.8%
3ktdC01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.86 82.0 7.29e-01 100.0% 84.5%
1jayA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.86 82.0 7.19e-01 100.0% 83.5%
5n2iD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.86 82.0 7.05e-01 100.0% 80.2%
7pceA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.85 80.0 7.44e-01 100.0% 87.1%
1np3B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 80.0 7.49e-01 100.0% 89.6%
3ws7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 80.0 7.60e-01 100.0% 90.3%
5y8lB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 80.0 7.89e-01 100.0% 96.9%
6o15A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 60.0 6.74e-01 72.4% 99.2%
3k96A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 79.0 7.33e-01 100.0% 92.5%
3ezyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 58.0 6.56e-01 71.1% 98.3%
5g6rA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 79.0 7.87e-01 100.0% 98.1%
3qsgA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 80.0 7.67e-01 100.0% 92.9%
5je8B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.83 79.0 7.66e-01 100.0% 95.2%
2amfA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.83 78.0 7.87e-01 100.0% 100.0%
2uyyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.83 79.0 7.58e-01 100.0% 93.5%
3euwA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.83 58.0 6.52e-01 71.1% 97.5%
3qhaA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.83 79.0 7.75e-01 100.0% 96.9%
3l6dA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.83 78.0 7.61e-01 100.0% 95.1%
2cvzA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.83 79.0 7.82e-01 100.0% 97.4%
1i36A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.83 76.0 7.48e-01 100.0% 92.5%
2rcyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.82 77.0 7.67e-01 100.0% 96.1%
1yqgA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.82 76.0 7.76e-01 100.0% 100.0%
4ezbA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.82 77.0 7.23e-01 100.0% 87.8%
3g0oA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.82 77.0 7.49e-01 100.0% 95.7%
3jyoA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.81 56.0 5.82e-01 70.4% 85.3%
3c24A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.80 75.0 7.10e-01 100.0% 95.5%
4j4hA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.79 52.0 5.77e-01 70.4% 82.3%
2d4aD01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.78 63.0 6.61e-01 83.6% 100.0%
4bgvA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.78 63.0 6.40e-01 83.6% 98.0%
3phhA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.78 58.0 6.30e-01 82.9% 90.8%
1kolA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.77 55.0 5.33e-01 72.4% 89.8%
3rc1A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.77 61.0 6.64e-01 98.7% 97.6%
6r8gA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.77 62.0 6.44e-01 83.6% 100.0%
4koaA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.76 58.0 6.48e-01 82.9% 98.4%
4uejA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.76 53.0 5.57e-01 71.1% 89.9%
1ydwA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.75 60.0 6.55e-01 98.7% 98.4%
2dq4A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.75 52.0 5.59e-01 71.1% 89.6%
1d1tA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.75 52.0 5.49e-01 71.1% 89.2%
6norA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.75 65.0 6.66e-01 100.0% 94.5%
5kiaA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.74 52.0 5.52e-01 71.1% 90.3%
4ycaB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.74 69.0 6.89e-01 100.0% 98.7%
3db2A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.74 64.0 6.66e-01 89.5% 97.1%
3moiA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.73 64.0 6.11e-01 92.1% 81.7%
4gqaD01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.73 60.0 6.38e-01 98.7% 97.0%
3e18A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.72 60.0 6.30e-01 92.8% 97.1%
1zh8A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 62.0 6.42e-01 100.0% 97.2%
3r1iB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 63.0 5.30e-01 94.1% 91.9%
3o9zA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 56.0 6.09e-01 82.2% 98.5%
3q2iA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 66.0 6.47e-01 100.0% 92.0%
3vpxB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 60.0 5.47e-01 89.5% 75.9%
3rd5A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 66.0 5.39e-01 100.0% 84.0%
1k2wA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 65.0 5.42e-01 100.0% 98.0%
1lssA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 56.0 6.03e-01 98.0% 97.0%
1gpjA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 57.0 5.74e-01 98.7% 85.1%
2yutA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 62.0 5.60e-01 94.7% 96.5%
3m2tB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 60.0 5.72e-01 92.1% 79.2%
3l6eA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 63.0 5.64e-01 98.0% 98.1%
5o1pA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 63.0 6.03e-01 98.0% 98.3%
1npyA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 61.0 5.91e-01 100.0% 84.0%
5o3zL00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 64.0 5.31e-01 100.0% 100.0%
2p2sA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 58.0 6.07e-01 90.1% 98.5%
3pt9A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 62.0 4.91e-01 98.7% 88.3%
3m6iA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 54.0 5.61e-01 83.6% 89.4%
3n74A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 61.0 5.29e-01 98.0% 95.2%
3td9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 55.0 5.59e-01 98.7% 87.4%
3gemD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 60.0 5.33e-01 98.0% 98.1%
4gnrA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 53.0 5.48e-01 96.7% 87.1%
2a4kB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 61.0 5.57e-01 99.3% 97.4%
2nwqA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 60.0 5.31e-01 98.7% 98.6%
4mptA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 54.0 5.53e-01 100.0% 88.4%
3g7uA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 60.0 5.60e-01 98.7% 95.1%
1usgA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 52.0 5.32e-01 100.0% 86.8%
6uutB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 59.0 5.40e-01 97.4% 89.2%
3hutA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 54.0 5.44e-01 100.0% 87.3%
8hi4B02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 60.0 5.09e-01 100.0% 100.0%
4evqA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 52.0 5.19e-01 98.7% 82.3%
4nqrA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 54.0 5.43e-01 100.0% 87.1%
3e9nA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 58.0 5.37e-01 98.0% 98.4%
2gsdA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 55.0 5.10e-01 98.0% 74.0%
4hy3A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 53.0 4.93e-01 100.0% 73.9%
3sg0A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 52.0 5.29e-01 100.0% 89.5%
1o89A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 52.0 5.07e-01 97.4% 80.8%
4n03A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 54.0 5.14e-01 97.4% 81.2%
3lkbA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 52.0 5.10e-01 97.4% 85.6%
3eafA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 54.0 5.14e-01 97.4% 84.2%
4xfkA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 52.0 4.98e-01 98.7% 81.2%
3l49A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 46.0 4.71e-01 85.5% 86.4%
2h4aA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 48.0 5.02e-01 90.1% 99.3%
1zemA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 48.0 4.11e-01 100.0% 95.4%
3lmzA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.51 46.0 3.90e-01 100.0% 63.7%
4xkyA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.50 45.0 3.64e-01 100.0% 68.1%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
168321 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.94 89.0 8.91e-01 98.0% 96.7%
4931377 2003.1.1.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N 0.89 85.0 6.70e-01 100.0% 55.7%
4953052 2003.1.1.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N 0.88 84.0 7.16e-01 100.0% 67.8%
5057533 2003.1.1.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N 0.88 84.0 8.27e-01 100.0% 98.1%
5049588 2003.1.1.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N 0.87 83.0 7.22e-01 100.0% 74.1%
5011972 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.87 83.0 7.67e-01 100.0% 82.7%
5030963 2003.1.1.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N 0.86 83.0 7.81e-01 100.0% 89.1%
None 0.86 83.0 7.48e-01 100.0% 82.1%
3386336 2003.1.1.147 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N, F420_oxidored 0.86 82.0 7.87e-01 100.0% 96.5%
3590108 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.86 82.0 8.11e-01 100.0% 97.5%
None 0.86 82.0 6.72e-01 100.0% 62.7%
4937601 2003.1.1.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N 0.86 81.0 7.22e-01 100.0% 73.7%
3597661 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.86 82.0 8.07e-01 100.0% 97.5%
2067962 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.86 81.0 6.99e-01 100.0% 79.1%
5074309 2003.1.1.45 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › UDPG_MGDP_dh_N 0.86 81.0 7.25e-01 100.0% 87.3%
4983478 2003.1.1.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N 0.86 82.0 7.93e-01 100.0% 97.0%
3838938 2003.1.1.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N 0.85 77.0 7.55e-01 94.1% 96.9%
3282897 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.85 81.0 7.01e-01 100.0% 80.8%
None 0.85 81.0 7.25e-01 100.0% 81.5%
None 0.85 81.0 7.40e-01 100.0% 85.8%
5026272 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.85 79.0 7.75e-01 100.0% 92.5%
5066992 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.85 81.0 7.85e-01 100.0% 92.1%
None 0.85 80.0 7.38e-01 100.0% 85.8%
4453829 2003.1.1.57 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › IlvN 0.85 80.0 6.96e-01 100.0% 74.1%
3962929 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.85 80.0 7.92e-01 100.0% 96.9%
4964916 2003.1.1.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N 0.85 77.0 7.53e-01 100.0% 88.5%
None 0.84 80.0 7.94e-01 100.0% 97.5%
3291116 2003.1.1.42 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_2 0.84 80.0 7.67e-01 100.0% 94.1%
3484743 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.84 80.0 7.41e-01 100.0% 89.2%
3388562 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.84 80.0 7.86e-01 100.0% 97.5%
3483447 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.84 80.0 7.74e-01 100.0% 93.9%
5037597 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.84 79.0 7.78e-01 100.0% 94.4%
4133812 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.83 79.0 7.27e-01 100.0% 84.2%
5032476 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.83 79.0 7.79e-01 100.0% 95.6%
4990585 2003.1.1.57 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › IlvN 0.83 79.0 7.39e-01 100.0% 91.7%
4877378 2003.1.1.42 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_2 0.83 78.0 7.66e-01 100.0% 94.5%
None 0.83 78.0 7.69e-01 100.0% 95.0%
3281138 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.83 78.0 6.31e-01 100.0% 65.2%
9172 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.83 76.0 7.63e-01 100.0% 96.7%
3165868 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.83 78.0 7.41e-01 100.0% 88.0%
3965694 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.82 77.0 7.66e-01 100.0% 96.8%
4426235 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.82 77.0 7.32e-01 100.0% 97.7%
4485515 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.82 77.0 7.24e-01 100.0% 95.0%
3989368 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.81 76.0 7.57e-01 99.3% 99.4%
4874994 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.81 60.0 6.80e-01 98.7% 98.3%
None 0.81 75.0 7.22e-01 100.0% 88.7%
4235164 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.79 59.0 6.62e-01 83.6% 97.5%
4998430 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.78 54.0 6.14e-01 70.4% 100.0%
5075873 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.78 68.0 6.05e-01 91.4% 73.7%
1390826 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.78 57.0 6.22e-01 81.6% 90.6%
None 0.77 54.0 5.78e-01 71.1% 96.9%
4981789 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.76 63.0 6.10e-01 92.1% 77.6%
4966199 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.75 65.0 5.00e-01 91.4% 91.0%
4292640 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.75 54.0 4.67e-01 99.3% 50.5%
5011339 2003.1.1.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH 0.75 54.0 5.18e-01 99.3% 65.9%
4066775 2003.1.1.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH 0.74 57.0 5.96e-01 98.7% 85.7%
4964143 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.74 65.0 6.24e-01 91.4% 81.8%
4325412 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.74 58.0 4.84e-01 98.0% 50.2%
5066046 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.74 62.0 6.45e-01 100.0% 95.7%
4990696 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.73 64.0 4.93e-01 92.1% 88.9%
4069650 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.73 66.0 5.40e-01 95.4% 99.2%
4975688 547.1.1.4 alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Shikimate_DH 0.73 59.0 4.81e-01 98.7% 48.8%
4939891 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.73 51.0 5.66e-01 71.1% 94.2%
4625701 2003.1.1.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH 0.73 56.0 5.86e-01 99.3% 86.4%
None 0.73 59.0 4.79e-01 98.7% 48.3%
4015759 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.72 57.0 5.19e-01 81.6% 77.9%
4090677 2003.1.1.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH 0.72 59.0 5.47e-01 98.7% 68.8%
3878795 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.72 68.0 4.91e-01 100.0% 86.2%
4222755 2003.1.1.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH 0.72 56.0 5.27e-01 98.7% 68.3%
None 0.72 58.0 4.79e-01 98.7% 50.2%
3777450 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.72 59.0 6.08e-01 90.1% 89.7%
None 0.71 67.0 4.90e-01 100.0% 86.8%
4637604 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.71 58.0 4.75e-01 98.7% 49.2%
4059072 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.71 58.0 4.78e-01 98.7% 49.1%
3414774 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.71 67.0 5.58e-01 100.0% 78.7%
4079949 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.71 57.0 4.72e-01 98.7% 49.2%
4958290 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.71 67.0 5.13e-01 100.0% 89.2%
3268798 2003.1.1.39 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP 0.71 64.0 5.58e-01 98.7% 97.0%
4678971 2003.1.1.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH 0.70 57.0 5.30e-01 98.7% 67.9%
4969868 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.70 64.0 6.52e-01 100.0% 98.7%
4116237 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.70 66.0 5.03e-01 100.0% 90.6%
4250236 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.70 57.0 4.65e-01 98.7% 48.7%
4032905 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.70 66.0 6.17e-01 100.0% 89.4%
4947113 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.70 62.0 6.39e-01 100.0% 99.3%
4564313 2003.1.5.68 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS_N 0.69 56.0 5.54e-01 86.8% 80.6%
9197 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.69 61.0 5.94e-01 100.0% 85.0%
4039262 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.69 56.0 4.46e-01 98.0% 44.1%
4641631 2003.6.1.2 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Carb_kinase 0.69 63.0 5.01e-01 98.0% 82.8%
4355042 2007.1.4.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase 0.69 50.0 5.50e-01 95.4% 92.0%
3942785 2003.1.1.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH 0.69 61.0 5.85e-01 100.0% 83.4%
3971881 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.69 65.0 5.94e-01 100.0% 80.5%
None 0.68 58.0 4.74e-01 98.0% 51.9%
5040716 2003.1.1.374 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Asp_DH_C 0.68 63.0 5.27e-01 100.0% 96.1%
4534489 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.67 61.0 5.87e-01 100.0% 85.9%
4241374 2003.1.1.318 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C, Malic_M 0.66 61.0 5.57e-01 98.0% 85.1%
2556701 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.65 59.0 5.44e-01 98.0% 89.5%
5075796 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.64 50.0 4.53e-01 81.6% 65.9%
4569254 2007.1.2.9 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF3798 0.61 43.0 4.06e-01 72.4% 65.0%
D2 medium residues 157-257
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10728.15 best DUF2520 85.7 3.10e-24 95.0% 73.6%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d1lA02 1.10.1040.20 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › ProC-like, C-terminal domain 0.98 92.0 9.36e-01 99.0% 99.0%
2i76A02 1.10.1040.20 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › ProC-like, C-terminal domain 0.88 82.0 8.15e-01 100.0% 96.2%
1d2mA03 6.10.140.240 Special › Helix non-globular › Helix Hairpins › 0.59 36.0 4.21e-01 91.1% 92.4%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.53 35.0 3.49e-01 98.0% 63.2%
1cnt200 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.53 44.0 4.09e-01 96.0% 71.5%
3zsuA00 1.20.120.290 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle 0.53 37.0 3.58e-01 74.3% 69.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
344927 129.1.1.14 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › DUF2520 0.98 91.0 8.95e-01 98.0% 91.5%
3519 129.1.1.14 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › DUF2520 0.88 81.0 8.11e-01 98.0% 96.1%
53260 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.87 81.0 8.15e-01 98.0% 99.0%
3520048 129.1.1.14 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › DUF2520 0.87 81.0 7.73e-01 100.0% 86.1%
5018556 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.54 40.0 3.88e-01 79.2% 96.5%