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CAKLQF020000006.1__CAH1079859.1__SAMEA5780031_01415__00058

Bact-Vir

CAKLQF020000006.1__CAH1079859.1__SAMEA5780031_01415__00058

Identity

Kingdom:
phage

Quality

87.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-75
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06099.17 best Phenol_hyd_sub 67.0 1.80e-18 75.4% 84.2%
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 48.0 3.94e-01 70.8% 42.2%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.68 52.0 4.68e-01 83.1% 91.2%
1h10A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 45.0 3.71e-01 70.8% 41.0%
2aehA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 45.0 3.83e-01 73.8% 56.8%
2o8bB02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.63 54.0 3.96e-01 100.0% 71.5%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 42.0 3.57e-01 70.8% 43.1%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 42.0 3.55e-01 70.8% 76.6%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.62 39.0 4.06e-01 73.8% 68.9%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.61 42.0 3.56e-01 70.8% 84.9%
2e6xA00 3.10.20.570 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3248 0.61 43.0 4.29e-01 81.5% 73.5%
1vhxB00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.61 51.0 4.15e-01 100.0% 75.4%
3u4zA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 41.0 3.48e-01 70.8% 71.6%
7essA01 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.61 46.0 3.75e-01 84.6% 96.2%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 37.0 3.74e-01 70.8% 60.3%
2awnC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 37.0 3.95e-01 70.8% 72.4%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 40.0 3.74e-01 70.8% 65.1%
2ar5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.59 40.0 3.35e-01 70.8% 79.5%
3thxA02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.58 48.0 3.71e-01 98.5% 55.8%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 45.0 3.42e-01 89.2% 73.8%
3ffyA00 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.56 41.0 3.44e-01 76.9% 91.1%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.56 38.0 3.35e-01 70.8% 100.0%
4a15A04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 39.0 2.86e-01 73.8% 64.9%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.55 37.0 3.09e-01 70.8% 51.2%
3kksB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 45.0 3.58e-01 98.5% 83.6%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.54 37.0 2.87e-01 70.8% 84.1%
8b4hA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 46.0 3.53e-01 100.0% 77.2%
2f9wA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 45.0 3.73e-01 100.0% 86.3%
4o5fA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 37.0 3.05e-01 73.8% 84.3%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 44.0 3.52e-01 100.0% 73.2%
3iujA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.53 47.0 2.97e-01 100.0% 27.9%
5mmjp00 3.30.1320.10 Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 0.52 37.0 3.54e-01 76.9% 81.2%
6eotD01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.52 45.0 2.71e-01 100.0% 31.0%
1lgyA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 38.0 2.63e-01 83.1% 34.3%
1e5tA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.52 46.0 2.88e-01 100.0% 29.2%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.51 37.0 2.94e-01 80.0% 77.7%
4frwA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 34.0 3.09e-01 70.8% 91.7%
5l09B00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.50 42.0 3.27e-01 100.0% 82.3%
7ne4A01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.50 44.0 2.83e-01 100.0% 28.0%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.50 34.0 2.96e-01 72.3% 75.0%
2h5eA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 42.0 3.14e-01 98.5% 51.3%
2ecfA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.50 44.0 2.69e-01 100.0% 20.2%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3706905 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 50.0 4.62e-01 73.8% 58.8%
3947541 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.69 45.0 4.96e-01 72.3% 86.0%
5052285 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 50.0 4.28e-01 76.9% 61.0%
3607901 2004.1.1.427 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N 0.68 48.0 2.92e-01 73.8% 12.2%
5043655 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 57.0 4.45e-01 95.4% 71.4%
4134120 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.66 58.0 4.38e-01 100.0% 59.4%
4311788 2.4.1.12 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.66 42.0 3.54e-01 72.3% 37.4%
4946199 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.64 44.0 4.27e-01 72.3% 69.3%
4350350 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.64 56.0 4.37e-01 100.0% 62.1%
3250605 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.63 43.0 3.50e-01 70.8% 72.8%
4606238 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.63 55.0 4.15e-01 100.0% 57.6%
4338934 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.63 42.0 4.27e-01 70.8% 69.2%
4136117 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.63 55.0 4.16e-01 100.0% 60.6%
4675327 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.63 54.0 4.19e-01 100.0% 61.3%
4965393 802.1.1.1 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.63 43.0 3.92e-01 72.3% 56.7%
4577571 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.63 54.0 4.13e-01 100.0% 58.1%
4513290 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.63 54.0 4.18e-01 100.0% 58.1%
4237138 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.62 54.0 4.15e-01 100.0% 57.4%
4228437 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.62 54.0 4.28e-01 96.9% 83.8%
4190224 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.61 53.0 3.24e-01 100.0% 19.3%
4971094 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.61 43.0 3.39e-01 72.3% 35.6%
3184194 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.61 52.0 3.82e-01 98.5% 64.2%
1489902 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.61 42.0 3.56e-01 70.8% 84.9%
4497599 2.4.1.11 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 0.61 40.0 3.45e-01 72.3% 41.9%
5011439 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.60 41.0 3.26e-01 72.3% 33.8%
4145578 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.60 52.0 4.13e-01 100.0% 60.0%
3607307 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.59 37.0 3.66e-01 70.8% 58.6%
5041307 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 45.0 3.04e-01 84.6% 51.9%
4001056 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.58 39.0 3.47e-01 70.8% 51.0%
3226744 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 41.0 3.71e-01 75.4% 70.0%
3400623 284.1.3.13 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › PF30019 0.57 38.0 3.74e-01 70.8% 69.3%
4393385 1032.1.1.1 alpha arrays › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › TcdA_TcdB_pore 0.57 45.0 3.38e-01 90.8% 67.2%
3232165 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.56 38.0 3.50e-01 72.3% 67.8%
3222918 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 45.0 3.63e-01 98.5% 63.3%
3203652 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.54 45.0 2.88e-01 100.0% 93.1%
3936886 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.54 45.0 3.57e-01 100.0% 67.1%
3937782 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.54 44.0 3.44e-01 96.9% 72.1%
3935131 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.54 45.0 3.48e-01 100.0% 63.6%
3258353 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.54 44.0 3.31e-01 100.0% 92.5%
2320506 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.54 39.0 3.10e-01 78.5% 69.4%
3631253 2484.1.1.206 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70, FGGY_C 0.54 44.0 3.27e-01 100.0% 88.1%
3171587 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.54 45.0 2.81e-01 100.0% 93.2%
3593730 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 44.0 3.22e-01 96.9% 97.6%
4250963 2011.2.1.3 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro 0.53 44.0 3.26e-01 98.5% 82.5%
3491951 5.1.4.220 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_2nd 0.53 42.0 2.69e-01 89.2% 95.1%
3481353 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 41.0 2.63e-01 87.7% 94.5%
3274367 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.52 43.0 3.25e-01 100.0% 94.2%
4988260 268.2.1.0 a+b two layers › Sterol carrier protein-like › LytR-Cps2A-Psr (LCP) enzymes › LytR-Cps2A-Psr (LCP) enzymes 0.52 41.0 2.98e-01 92.3% 94.9%
3255532 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.52 42.0 3.14e-01 100.0% 91.2%
3260350 2484.1.1.10 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD 0.51 41.0 3.46e-01 95.4% 93.8%
3618372 2484.1.1.99 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A17 0.51 40.0 3.35e-01 87.7% 91.7%
3394577 7039.1.1.1 a+b complex topology › Helical domain of PCIF1/CAPAM › Helical domain of PCIF1/CAPAM › Helical domain of PCIF1/CAPAM › PCIF1_WW 0.51 36.0 2.47e-01 73.8% 24.8%
4965285 2.1.1.376 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF25921 0.51 42.0 3.87e-01 92.3% 74.1%
3742980 4099.1.1.4 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O 0.51 34.0 2.88e-01 70.8% 50.4%