←Back to structures
CAKLQF020000006.1__CAH1079886.1__SAMEA5780031_01424__00067
Bact-VirCAKLQF020000006.1__CAH1079886.1__SAMEA5780031_01424__00067
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-71
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pstX00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.66 | 39.0 | 4.13e-01 | 100.0% | 67.2% |
| 1yloE02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.66 | 50.0 | 4.75e-01 | 98.6% | 69.0% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.64 | 44.0 | 3.52e-01 | 98.6% | 36.2% |
| 3m4rA01 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.62 | 43.0 | 3.13e-01 | 72.9% | 34.8% |
| 1i9gA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.58 | 45.0 | 4.70e-01 | 95.7% | 92.2% |
| 2ervA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 50.0 | 3.93e-01 | 95.7% | 96.7% |
| 3f6zB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.57 | 47.0 | 4.56e-01 | 92.9% | 97.5% |
| 5ay6A01 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.56 | 48.0 | 3.72e-01 | 100.0% | 79.5% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.56 | 49.0 | 4.60e-01 | 100.0% | 98.9% |
| 2o5nA02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.56 | 45.0 | 3.62e-01 | 94.3% | 82.2% |
| 1mw7A02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.56 | 38.0 | 3.58e-01 | 100.0% | 57.5% |
| 2jpeA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.56 | 47.0 | 3.86e-01 | 95.7% | 83.3% |
| 1o54A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.56 | 43.0 | 4.32e-01 | 98.6% | 83.3% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 50.0 | 4.08e-01 | 98.6% | 62.1% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 50.0 | 3.98e-01 | 100.0% | 94.1% |
| 2yvsA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.55 | 36.0 | 3.11e-01 | 97.1% | 42.1% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.55 | 41.0 | 3.69e-01 | 100.0% | 55.8% |
| 1vf7F01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.54 | 41.0 | 3.72e-01 | 98.6% | 57.8% |
| 2dlgA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 36.0 | 3.49e-01 | 100.0% | 60.0% |
| 1cyyA02 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.54 | 45.0 | 3.85e-01 | 97.1% | 92.8% |
| 4zciA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 42.0 | 3.82e-01 | 100.0% | 60.4% |
| 1n4kA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 45.0 | 3.66e-01 | 95.7% | 100.0% |
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 43.0 | 4.42e-01 | 98.6% | 92.6% |
| 1fhoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 46.0 | 3.94e-01 | 100.0% | 72.3% |
| 6rtqA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.53 | 45.0 | 3.71e-01 | 95.7% | 92.5% |
| 5bncB01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 48.0 | 3.72e-01 | 100.0% | 78.5% |
| 1konA02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.53 | 35.0 | 3.26e-01 | 100.0% | 52.2% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 42.0 | 3.55e-01 | 98.6% | 50.4% |
| 3otpA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 40.0 | 2.94e-01 | 100.0% | 29.1% |
| 2pwyA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.53 | 40.0 | 4.31e-01 | 92.9% | 100.0% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.53 | 45.0 | 3.96e-01 | 97.1% | 92.5% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 45.0 | 3.89e-01 | 100.0% | 82.5% |
| 2xe4A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 43.0 | 2.77e-01 | 94.3% | 28.2% |
| 2cocA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 44.0 | 3.95e-01 | 95.7% | 82.0% |
| 1h4rA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 43.0 | 4.03e-01 | 95.7% | 82.4% |
| 2ovsA00 | 2.40.128.380 | Mainly Beta › Beta Barrel › Lipocalin › T3SS negative regulator GrlR | 0.52 | 44.0 | 3.78e-01 | 98.6% | 82.2% |
| 8jj7A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 44.0 | 2.85e-01 | 94.3% | 31.4% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.51 | 41.0 | 2.95e-01 | 90.0% | 34.1% |
| 1i7dA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.51 | 45.0 | 3.61e-01 | 100.0% | 92.2% |
| 1mrzB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.51 | 46.0 | 3.93e-01 | 100.0% | 72.3% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 42.0 | 3.80e-01 | 98.6% | 66.7% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 41.0 | 3.63e-01 | 100.0% | 60.7% |
| 6mv2A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 42.0 | 3.81e-01 | 100.0% | 68.6% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3271377 | 375.1.1.296 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Dicty_spore_N | 0.68 | 44.0 | 4.51e-01 | 94.3% | 69.1% |
| 3420348 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.64 | 43.0 | 4.76e-01 | 98.6% | 87.3% |
| 1146571 | 5092.1.1.8 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › TAdV_Fibre-like_head | 0.64 | 44.0 | 3.52e-01 | 98.6% | 36.2% |
| 4105189 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 43.0 | 3.95e-01 | 100.0% | 53.7% |
| 5035871 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.63 | 44.0 | 4.01e-01 | 94.3% | 54.7% |
| 3839016 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.62 | 44.0 | 4.54e-01 | 100.0% | 80.0% |
| 3411284 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.60 | 47.0 | 4.10e-01 | 85.7% | 81.8% |
| 4930890 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 41.0 | 4.02e-01 | 100.0% | 69.3% |
| 3713672 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 52.0 | 4.39e-01 | 100.0% | 85.2% |
| 3608011 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 52.0 | 4.31e-01 | 100.0% | 85.8% |
| 4243619 | 382.1.1.29 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Dicty_spore_N | 0.57 | 37.0 | 3.64e-01 | 94.3% | 61.3% |
| 169848 | 9.11.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC | 0.57 | 47.0 | 4.32e-01 | 92.9% | 82.8% |
| 3952469 | 3794.1.1.2 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCC_alpha_BT | 0.56 | 42.0 | 3.50e-01 | 81.4% | 70.0% |
| 3449628 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.56 | 42.0 | 3.59e-01 | 100.0% | 48.7% |
| 3366414 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.56 | 44.0 | 3.75e-01 | 98.6% | 52.2% |
| 3580789 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.56 | 50.0 | 4.18e-01 | 98.6% | 70.0% |
| 3417047 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.56 | 40.0 | 4.18e-01 | 100.0% | 84.6% |
| 1283866 | 220.1.1.51 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP3_C | 0.55 | 50.0 | 4.08e-01 | 98.6% | 62.1% |
| 5036254 | 75.1.1.4 ↗ | beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › Cyclophil_like | 0.55 | 47.0 | 4.01e-01 | 98.6% | 100.0% |
| 3912537 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.55 | 38.0 | 3.16e-01 | 74.3% | 94.3% |
| 2392667 | 9.11.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › Nm-ACP | 0.55 | 45.0 | 4.11e-01 | 97.1% | 94.2% |
| 3704544 | 220.1.1.12 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 | 0.54 | 49.0 | 3.84e-01 | 100.0% | 50.3% |
| 4008093 | 1.10.1.1 ↗ | beta barrels › cradle loop barrel › HI0933 barrel domain-like › HI0933 barrel domain-like › HI0933_like_1st | 0.54 | 36.0 | 3.41e-01 | 95.7% | 56.5% |
| 3496497 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.54 | 45.0 | 3.33e-01 | 100.0% | 33.2% |
| 5043351 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.54 | 38.0 | 3.47e-01 | 95.7% | 54.0% |
| 4368601 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.54 | 45.0 | 4.10e-01 | 98.6% | 93.0% |
| 4972339 | 75.1.1.4 ↗ | beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › Cyclophil_like | 0.53 | 45.0 | 3.83e-01 | 100.0% | 96.2% |
| 4957228 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.53 | 40.0 | 3.31e-01 | 81.4% | 44.6% |
| 3254541 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 48.0 | 4.12e-01 | 100.0% | 75.5% |
| 4113222 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.53 | 45.0 | 3.69e-01 | 98.6% | 93.6% |
| 3680900 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.53 | 47.0 | 3.93e-01 | 100.0% | 73.3% |
| 3447254 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.53 | 45.0 | 3.25e-01 | 100.0% | 53.2% |
| 4258905 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.52 | 43.0 | 3.69e-01 | 97.1% | 91.2% |
| 3500932 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.52 | 44.0 | 2.91e-01 | 94.3% | 36.9% |
| 4004179 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.52 | 44.0 | 3.10e-01 | 95.7% | 31.7% |
| 3523462 | 2487.1.1.7 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA | 0.52 | 43.0 | 3.51e-01 | 100.0% | 97.3% |
| 3966647 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.51 | 41.0 | 3.80e-01 | 91.4% | 87.4% |
| 3254455 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.51 | 40.0 | 3.20e-01 | 91.4% | 78.2% |
| 3250163 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 42.0 | 3.87e-01 | 94.3% | 78.9% |
| 127 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.51 | 46.0 | 3.93e-01 | 100.0% | 72.5% |
| 3585619 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 44.0 | 3.57e-01 | 98.6% | 54.1% |
| 3478944 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.50 | 43.0 | 3.86e-01 | 100.0% | 85.7% |