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CAKLQF020000006.1__CAH1079949.1__SAMEA5780031_01446__00088
Bact-VirCAKLQF020000006.1__CAH1079949.1__SAMEA5780031_01446__00088
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-24_84-260
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.72 | 33.0 | 4.37e-01 | 85.7% | 77.5% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.72 | 31.0 | 4.44e-01 | 84.7% | 84.4% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.70 | 26.0 | 4.12e-01 | 95.9% | 87.8% |
| 2n3gA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 23.0 | 3.63e-01 | 94.4% | 86.1% |
| 2xskA00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 25.0 | 3.59e-01 | 87.2% | 77.9% |
| 2n59A00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 27.0 | 3.67e-01 | 88.3% | 78.2% |
| 5wl1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 29.0 | 3.97e-01 | 98.0% | 87.1% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.61 | 30.0 | 4.32e-01 | 79.1% | 100.0% |
| 3oc4B03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.60 | 27.0 | 3.45e-01 | 95.4% | 68.6% |
| 1shsA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 24.0 | 3.06e-01 | 90.8% | 59.1% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.59 | 29.0 | 4.17e-01 | 77.0% | 100.0% |
| 1pqzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 29.0 | 3.93e-01 | 96.9% | 91.1% |
| 5ajiB03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 29.0 | 4.01e-01 | 74.0% | 96.8% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.58 | 36.0 | 3.81e-01 | 93.4% | 68.6% |
| 4liqE05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 24.0 | 3.37e-01 | 83.2% | 77.0% |
| 4zohA01 | 3.90.1170.50 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead | 0.57 | 26.0 | 3.47e-01 | 86.7% | 77.4% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 22.0 | 3.10e-01 | 83.2% | 73.7% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.53 | 39.0 | 4.24e-01 | 95.9% | 89.2% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.53 | 32.0 | 3.61e-01 | 97.4% | 78.2% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.53 | 29.0 | 3.50e-01 | 77.6% | 77.7% |
| 4e5xG00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 24.0 | 3.18e-01 | 98.0% | 81.8% |
| 5l6gA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.52 | 33.0 | 3.19e-01 | 91.3% | 55.0% |
| 2cwrA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 27.0 | 3.63e-01 | 99.0% | 100.0% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.51 | 29.0 | 3.34e-01 | 80.1% | 72.8% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 23.0 | 2.88e-01 | 99.5% | 67.6% |
| 3hlzB01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.51 | 29.0 | 3.44e-01 | 78.1% | 77.9% |
| 4qhpA04 | 2.60.40.1840 | Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain | 0.50 | 24.0 | 3.18e-01 | 89.3% | 84.2% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3956463 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.88 | 84.0 | 7.53e-01 | 99.0% | 99.6% |
| 4524129 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.75 | 32.0 | 4.57e-01 | 99.5% | 82.1% |
| 3593374 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.65 | 29.0 | 3.72e-01 | 98.0% | 70.4% |
| 3507519 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 20.0 | 3.59e-01 | 78.6% | 95.0% |
| 5009785 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.61 | 53.0 | 5.60e-01 | 92.3% | 100.0% |
| 4966673 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.61 | 27.0 | 3.65e-01 | 78.1% | 77.1% |
| 4540264 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.59 | 32.0 | 3.70e-01 | 96.9% | 69.3% |
| 3707891 | 243.3.1.73 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF7920 | 0.58 | 23.0 | 3.36e-01 | 94.9% | 78.9% |
| 3595528 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.57 | 38.0 | 4.47e-01 | 91.8% | 95.6% |
| 3727278 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.57 | 40.0 | 3.86e-01 | 70.4% | 90.2% |
| 3623034 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.56 | 26.0 | 2.67e-01 | 90.3% | 42.6% |
| 4019479 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.56 | 44.0 | 3.70e-01 | 81.6% | 80.9% |
| 5005735 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 25.0 | 3.39e-01 | 91.8% | 85.6% |
| 4971123 | 304.136.1.0 ↗ | a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain | 0.54 | 30.0 | 3.92e-01 | 94.9% | 96.4% |
| 3875809 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.54 | 32.0 | 3.50e-01 | 93.4% | 68.5% |
| 4027564 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 32.0 | 4.05e-01 | 95.9% | 99.1% |
| 3056279 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.53 | 33.0 | 3.58e-01 | 96.9% | 71.2% |
| 4621809 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.53 | 34.0 | 3.06e-01 | 73.0% | 45.2% |
| 3611742 | 304.42.1.1 ↗ | a+b two layers › Alpha-beta plaits › Molybdenum cofactor biosynthesis protein C, MoaC › Molybdenum cofactor biosynthesis protein C, MoaC › MoaC | 0.53 | 34.0 | 3.82e-01 | 74.0% | 82.4% |
| 3270312 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.53 | 33.0 | 3.49e-01 | 95.4% | 67.4% |
| 3534691 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.52 | 32.0 | 3.44e-01 | 97.4% | 69.1% |
| 4982173 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 29.0 | 3.65e-01 | 95.9% | 93.0% |