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CAKLQF020000006.1__CAH1080107.1__SAMEA5780031_01486__00128
Bact-VirCAKLQF020000006.1__CAH1080107.1__SAMEA5780031_01486__00128
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-78
Domain cluster:
rep: OQ471969.1__WEU68086.1__vBAbaMABMM1_66__00066__D2-62
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.62 | 46.0 | 3.51e-01 | 78.9% | 88.8% |
| 3obqA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.60 | 42.0 | 3.47e-01 | 73.7% | 77.3% |
| 1h4uA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.58 | 42.0 | 3.00e-01 | 77.6% | 48.2% |
| 4gnxC03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 40.0 | 3.10e-01 | 73.7% | 57.4% |
| 2qkpD00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 39.0 | 3.32e-01 | 76.3% | 74.6% |
| 8f5pE01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 40.0 | 2.58e-01 | 78.9% | 24.2% |
| 3a57A00 | 2.60.270.30 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Vibrio parahaemolyticus thermostable direct hemolysin | 0.54 | 41.0 | 3.32e-01 | 82.9% | 96.8% |
| 3lidA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 38.0 | 3.29e-01 | 78.9% | 65.7% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 37.0 | 3.34e-01 | 75.0% | 70.0% |
| 8c5yA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 42.0 | 3.29e-01 | 89.5% | 78.8% |
| 2i9wA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 39.0 | 3.09e-01 | 84.2% | 68.8% |
| 2lf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 41.0 | 3.18e-01 | 89.5% | 55.4% |
| 1rxtC02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 42.0 | 3.26e-01 | 97.4% | 57.5% |
| 6d92A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 41.0 | 3.02e-01 | 97.4% | 92.2% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3672911 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.67 | 48.0 | 3.54e-01 | 76.3% | 87.0% |
| 3990877 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.65 | 46.0 | 3.99e-01 | 73.7% | 53.9% |
| 3709267 | 5.1.2.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 | 0.65 | 46.0 | 3.06e-01 | 76.3% | 47.9% |
| 4887266 | 2492.1.1.42 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB, MitMem_reg | 0.64 | 45.0 | 3.46e-01 | 72.4% | 35.3% |
| 4959068 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.61 | 44.0 | 2.96e-01 | 77.6% | 34.0% |
| 3642588 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.61 | 45.0 | 4.09e-01 | 80.3% | 95.2% |
| 3738197 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.61 | 43.0 | 3.35e-01 | 73.7% | 82.4% |
| 4137739 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.59 | 43.0 | 3.28e-01 | 78.9% | 81.5% |
| 3925865 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.57 | 41.0 | 3.56e-01 | 76.3% | 74.2% |
| 3212189 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.57 | 39.0 | 3.44e-01 | 71.1% | 77.4% |
| 3666058 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.56 | 39.0 | 3.63e-01 | 71.1% | 65.3% |
| 4944869 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 46.0 | 3.94e-01 | 93.4% | 71.5% |
| 3393480 | 3398.1.1.1 ↗ | a/b three-layered sandwiches › STING C-terminal domain › STING C-terminal domain › STING C-terminal domain › TMEM173 | 0.56 | 44.0 | 3.41e-01 | 92.1% | 86.5% |
| 5048982 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 45.0 | 3.31e-01 | 94.7% | 88.1% |
| 5057050 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 38.0 | 3.27e-01 | 75.0% | 86.4% |
| 3886322 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.54 | 38.0 | 2.44e-01 | 78.9% | 14.8% |
| 4018089 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 40.0 | 3.50e-01 | 84.2% | 74.2% |
| 3223498 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.52 | 38.0 | 3.27e-01 | 78.9% | 68.5% |
| 3914285 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 37.0 | 2.98e-01 | 75.0% | 69.3% |
| 4670966 | 223.1.1.81 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Cache_WalK | 0.51 | 37.0 | 3.16e-01 | 77.6% | 57.8% |
| 4039533 | 3321.1.1.1 ↗ | a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › FAS_meander | 0.51 | 37.0 | 3.05e-01 | 80.3% | 68.8% |
| 3824181 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.51 | 36.0 | 3.91e-01 | 73.7% | 100.0% |
| 3869953 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 38.0 | 2.41e-01 | 78.9% | 19.2% |
| 3721632 | 206.1.1.82 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF7580 | 0.50 | 36.0 | 2.40e-01 | 76.3% | 29.9% |
| 5050870 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.50 | 43.0 | 3.28e-01 | 100.0% | 72.8% |
| 4935307 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 36.0 | 3.60e-01 | 78.9% | 90.0% |