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CAKLQF020000006.1__CAH1080222.1__SAMEA5780031_01517__00159
Bact-VirCAKLQF020000006.1__CAH1080222.1__SAMEA5780031_01517__00159
Identity
- Kingdom:
- phage
Quality
70.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 224-307
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.74 | 54.0 | 5.55e-01 | 77.4% | 79.7% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.65 | 51.0 | 3.97e-01 | 83.3% | 42.2% |
| 1lkeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 52.0 | 4.28e-01 | 90.5% | 51.0% |
| 1ulvA04 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 43.0 | 3.07e-01 | 70.2% | 58.7% |
| 2hzrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 49.0 | 3.92e-01 | 82.1% | 42.9% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 51.0 | 4.40e-01 | 98.8% | 56.5% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 50.0 | 4.00e-01 | 85.7% | 90.9% |
| 3pzfA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.62 | 52.0 | 4.04e-01 | 90.5% | 94.9% |
| 4qxaB00 | 2.30.29.230 | Mainly Beta › Roll › PH-domain like › | 0.62 | 43.0 | 3.60e-01 | 72.6% | 97.3% |
| 4bj8K00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.62 | 55.0 | 4.90e-01 | 98.8% | 76.7% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.61 | 43.0 | 3.54e-01 | 94.0% | 40.3% |
| 4xmeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 50.0 | 3.89e-01 | 90.5% | 45.7% |
| 2n93A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 50.0 | 4.36e-01 | 92.9% | 67.7% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.59 | 44.0 | 3.70e-01 | 82.1% | 45.0% |
| 6nobA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 52.0 | 3.41e-01 | 100.0% | 50.8% |
| 1z24A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 49.0 | 3.78e-01 | 90.5% | 89.9% |
| 5cfvA01 | 3.30.700.10 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin | 0.59 | 49.0 | 4.61e-01 | 94.0% | 85.0% |
| 1ms9A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.59 | 50.0 | 3.36e-01 | 97.6% | 40.7% |
| 3bdrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 44.0 | 3.62e-01 | 100.0% | 42.9% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.58 | 43.0 | 3.99e-01 | 76.2% | 76.0% |
| 1s0wC01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.58 | 44.0 | 4.30e-01 | 79.8% | 96.7% |
| 4c47A01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.57 | 43.0 | 3.89e-01 | 82.1% | 89.3% |
| 1tqzA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 41.0 | 3.67e-01 | 76.2% | 76.4% |
| 1qwyA02 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.57 | 45.0 | 3.66e-01 | 88.1% | 89.5% |
| 4rnyA03 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.56 | 42.0 | 3.64e-01 | 78.6% | 56.2% |
| 7fisA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 48.0 | 3.32e-01 | 97.6% | 44.7% |
| 2w5nA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 49.0 | 3.23e-01 | 100.0% | 46.8% |
| 2iecD00 | 3.30.1300.20 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) | 0.55 | 48.0 | 4.26e-01 | 94.0% | 88.9% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 48.0 | 3.93e-01 | 98.8% | 66.0% |
| 1dmlA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.55 | 43.0 | 3.05e-01 | 84.5% | 44.6% |
| 4i79A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 48.0 | 3.27e-01 | 100.0% | 40.2% |
| 5ds1A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 39.0 | 3.77e-01 | 75.0% | 85.9% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 49.0 | 4.11e-01 | 98.8% | 74.1% |
| 2ijaA00 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.54 | 45.0 | 3.11e-01 | 92.9% | 90.8% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 40.0 | 3.70e-01 | 100.0% | 61.4% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 46.0 | 4.35e-01 | 97.6% | 80.6% |
| 1jyoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 43.0 | 3.75e-01 | 90.5% | 85.4% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.52 | 46.0 | 3.64e-01 | 100.0% | 52.7% |
| 3ffzA04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 41.0 | 3.26e-01 | 86.9% | 91.6% |
| 1hn0A04 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.51 | 44.0 | 3.97e-01 | 100.0% | 89.3% |
| 3hkzG00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 36.0 | 3.25e-01 | 73.8% | 71.7% |
| 3cwvA02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.51 | 37.0 | 3.11e-01 | 78.6% | 68.9% |
| 3wpwA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.51 | 40.0 | 3.43e-01 | 90.5% | 87.2% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 39.0 | 3.42e-01 | 83.3% | 98.4% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4982246 | 3521.1.1.0 ↗ | a+b three layers › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain | 0.70 | 46.0 | 4.33e-01 | 94.0% | 56.0% |
| 3406725 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.69 | 60.0 | 4.15e-01 | 94.0% | 47.0% |
| 3612141 | 719.1.1.5 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 | 0.69 | 52.0 | 4.36e-01 | 79.8% | 100.0% |
| 3969815 | 4210.1.1.5 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › PA4575 | 0.68 | 41.0 | 3.84e-01 | 78.6% | 51.0% |
| 4530660 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.66 | 50.0 | 4.15e-01 | 79.8% | 51.0% |
| 4934297 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.66 | 48.0 | 4.40e-01 | 77.4% | 84.5% |
| 3425387 | 9.3.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › DUF2921_N | 0.64 | 50.0 | 3.98e-01 | 85.7% | 66.9% |
| 5044522 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 43.0 | 3.57e-01 | 70.2% | 78.7% |
| 4075485 | 11.1.1.649 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BPTA | 0.63 | 49.0 | 3.81e-01 | 82.1% | 78.9% |
| 3237969 | 207.1.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 | 0.62 | 42.0 | 3.09e-01 | 82.1% | 25.1% |
| 4262684 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.61 | 50.0 | 3.94e-01 | 90.5% | 93.9% |
| 5794 | 295.1.1.7 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › MRP | 0.61 | 43.0 | 3.54e-01 | 94.0% | 40.3% |
| 3461753 | 9.2.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF2921_N | 0.61 | 50.0 | 3.92e-01 | 90.5% | 58.2% |
| 4250029 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.60 | 44.0 | 4.51e-01 | 90.5% | 81.2% |
| 3926852 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 41.0 | 3.46e-01 | 70.2% | 91.4% |
| 3593405 | 897.1.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 | 0.60 | 51.0 | 4.01e-01 | 100.0% | 45.3% |
| 3394321 | 9.1.1.45 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › FBO_C | 0.59 | 53.0 | 4.16e-01 | 98.8% | 80.0% |
| 3287644 | 225.1.1.6 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_2 | 0.59 | 46.0 | 4.01e-01 | 84.5% | 93.8% |
| 3823935 | 9.2.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF2921_N | 0.59 | 48.0 | 3.74e-01 | 90.5% | 57.9% |
| 4991691 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 53.0 | 3.85e-01 | 100.0% | 60.7% |
| 3767494 | 220.1.1.55 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SYCP2_SLD | 0.58 | 44.0 | 3.91e-01 | 79.8% | 61.7% |
| 4024769 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.58 | 40.0 | 4.40e-01 | 82.1% | 93.8% |
| 4983635 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.58 | 44.0 | 3.91e-01 | 79.8% | 77.4% |
| 3649311 | 9.2.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF2921_N | 0.57 | 47.0 | 3.68e-01 | 90.5% | 98.9% |
| 4015564 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.56 | 49.0 | 3.37e-01 | 98.8% | 38.1% |
| 3266766 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.56 | 45.0 | 3.95e-01 | 88.1% | 93.8% |
| 3417002 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 52.0 | 4.56e-01 | 100.0% | 76.7% |
| 4026463 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 50.0 | 3.23e-01 | 100.0% | 33.4% |
| 3704313 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.56 | 38.0 | 3.38e-01 | 71.4% | 84.8% |
| 2169 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.56 | 48.0 | 3.28e-01 | 97.6% | 35.2% |
| 4409039 | 2008.1.1.207 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_7 | 0.55 | 43.0 | 3.11e-01 | 82.1% | 32.3% |
| 3733996 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.55 | 48.0 | 3.21e-01 | 100.0% | 33.5% |
| 4611713 | 243.3.1.59 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › GvpO | 0.54 | 43.0 | 4.38e-01 | 98.8% | 91.3% |
| 3255655 | 12.2.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Vanin_C | 0.54 | 44.0 | 3.71e-01 | 91.7% | 91.3% |
| 3718988 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 47.0 | 3.18e-01 | 100.0% | 37.6% |
| 3310416 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.54 | 44.0 | 3.76e-01 | 92.9% | 70.3% |
| 3364481 | 9.2.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF2921_N | 0.54 | 47.0 | 3.86e-01 | 98.8% | 80.0% |
| 3185089 | 9.1.1.37 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF6314 | 0.53 | 47.0 | 3.69e-01 | 100.0% | 89.1% |
| 3267451 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.53 | 43.0 | 2.92e-01 | 90.5% | 30.5% |
| 3829563 | 897.1.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 | 0.53 | 44.0 | 3.60e-01 | 100.0% | 48.5% |
| 3330367 | 9.2.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF2921_N | 0.52 | 47.0 | 3.61e-01 | 98.8% | 98.4% |
| 3861569 | 220.1.1.56 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH | 0.52 | 45.0 | 4.10e-01 | 95.2% | 71.3% |
| 3926459 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 4.03e-01 | 90.5% | 80.0% |
| 3606556 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 46.0 | 2.72e-01 | 100.0% | 19.0% |
| 4977196 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.52 | 39.0 | 2.88e-01 | 83.3% | 79.6% |
| 3476559 | 5.1.13.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain of DCAF15 › DCAF15_WD40 | 0.52 | 45.0 | 2.98e-01 | 95.2% | 37.7% |
| 3411538 | 11.1.1.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON | 0.52 | 42.0 | 3.39e-01 | 89.3% | 78.2% |
| 3813618 | 9.3.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › DUF2921_N | 0.51 | 44.0 | 3.36e-01 | 100.0% | 96.7% |
| 3775836 | 220.1.1.56 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH | 0.51 | 41.0 | 3.82e-01 | 95.2% | 68.2% |
| 3812573 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.51 | 39.0 | 2.90e-01 | 85.7% | 89.6% |
D2
high
residues 659-748
Domain cluster:
rep: NC_048672.1__YP_009834297.1__HWB27_gp55__00055__D51-133
D3
medium
residues 134-188