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CAKLQF020000006.1__CAH1080358.1__SAMEA5780031_01571__00212
Bact-VirCAKLQF020000006.1__CAH1080358.1__SAMEA5780031_01571__00212
Identity
- Kingdom:
- phage
Quality
91.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 126-217
Domain cluster:
representative
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13180.13 best | PDZ_2 | 32.1 | 1.60e-07 | 76.1% | 77.5% |
| PF00595.30 | PDZ | 33.6 | 5.60e-08 | 64.1% | 45.7% |
| PF17820.8 | PDZ_6 | 29.6 | 6.40e-07 | 54.4% | 70.4% |
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zplB00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.91 | 87.0 | 8.62e-01 | 98.9% | 98.9% |
| 3wkmB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.88 | 79.0 | 7.84e-01 | 98.9% | 91.5% |
| 6iccA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.88 | 78.0 | 8.12e-01 | 98.9% | 98.8% |
| 3pv2A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.88 | 65.0 | 6.64e-01 | 76.1% | 89.8% |
| 4yo1A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.87 | 68.0 | 6.79e-01 | 81.5% | 92.6% |
| 7w6zA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.87 | 82.0 | 8.19e-01 | 100.0% | 97.9% |
| 6ieoA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.85 | 68.0 | 6.81e-01 | 83.7% | 87.2% |
| 7co7D03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.85 | 65.0 | 6.51e-01 | 80.4% | 92.6% |
| 1ky9B03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 64.0 | 6.41e-01 | 80.4% | 90.4% |
| 7xs0A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 59.0 | 6.24e-01 | 73.9% | 96.4% |
| 1y8tA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 68.0 | 6.97e-01 | 87.0% | 89.8% |
| 1te0A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.82 | 67.0 | 6.53e-01 | 85.9% | 91.0% |
| 4jj0B00 | 2.30.42.60 | Mainly Beta › Roll › Pdz3 Domain › | 0.82 | 71.0 | 5.53e-01 | 91.3% | 57.2% |
| 5m3nA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.82 | 64.0 | 6.29e-01 | 81.5% | 92.8% |
| 7w6yA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 67.0 | 7.09e-01 | 91.3% | 98.8% |
| 2zpmA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.80 | 69.0 | 7.18e-01 | 96.7% | 98.8% |
| 2p3wB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.80 | 64.0 | 6.32e-01 | 83.7% | 87.5% |
| 4fgmA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.80 | 65.0 | 6.28e-01 | 88.0% | 76.7% |
| 3qo6A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.78 | 69.0 | 6.65e-01 | 92.4% | 90.2% |
| 4c2dA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.78 | 63.0 | 6.30e-01 | 92.4% | 83.9% |
| 3rleA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.78 | 69.0 | 6.61e-01 | 97.8% | 83.7% |
| 2i6vA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.77 | 57.0 | 5.92e-01 | 77.2% | 89.7% |
| 4l8nA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.77 | 61.0 | 6.13e-01 | 83.7% | 90.4% |
| 2hgaA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.76 | 66.0 | 6.82e-01 | 100.0% | 100.0% |
| 4o06A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.76 | 65.0 | 6.32e-01 | 96.7% | 83.3% |
| 2l97A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.75 | 58.0 | 5.71e-01 | 82.6% | 92.9% |
| 4edjA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.74 | 65.0 | 6.35e-01 | 98.9% | 87.8% |
| 5t69A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.74 | 65.0 | 6.14e-01 | 92.4% | 89.6% |
| 1fc6A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.72 | 62.0 | 6.25e-01 | 94.6% | 92.4% |
| 4flnA02 | 3.20.190.20 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › | 0.72 | 61.0 | 5.07e-01 | 90.2% | 91.4% |
| 1k32A04 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.71 | 61.0 | 6.10e-01 | 92.4% | 90.5% |
| 2kjpA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.70 | 56.0 | 5.97e-01 | 87.0% | 100.0% |
| 4ghnA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.67 | 57.0 | 5.49e-01 | 92.4% | 88.6% |
| 1g29102 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 31.0 | 4.32e-01 | 77.2% | 91.1% |
| 3k50A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.64 | 56.0 | 5.44e-01 | 92.4% | 88.0% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.58 | 34.0 | 3.95e-01 | 89.1% | 79.1% |
| 1vq8Q00 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.57 | 37.0 | 3.67e-01 | 97.8% | 62.1% |
| 5bncA02 | 3.20.180.10 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like | 0.56 | 41.0 | 4.12e-01 | 96.7% | 77.4% |
| 2gy5A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 4.00e-01 | 79.3% | 94.9% |
| 1kyfA01 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.54 | 38.0 | 3.42e-01 | 73.9% | 91.0% |
| 1r9fA01 | 3.30.390.180 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 | 0.53 | 37.0 | 3.60e-01 | 73.9% | 80.7% |
| 4joiA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 41.0 | 3.51e-01 | 81.5% | 59.6% |
| 1hczA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.52 | 33.0 | 3.76e-01 | 81.5% | 96.6% |
| 6vg1A01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 39.0 | 3.93e-01 | 79.3% | 81.7% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.52 | 43.0 | 3.98e-01 | 93.5% | 98.3% |
| 3t0pA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.50 | 42.0 | 3.28e-01 | 90.2% | 74.1% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3969766 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.95 | 92.0 | 8.88e-01 | 100.0% | 95.0% |
| 3595553 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.92 | 66.0 | 6.28e-01 | 73.9% | 80.0% |
| 5032914 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.92 | 70.0 | 6.48e-01 | 78.3% | 92.7% |
| 4562453 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.92 | 88.0 | 8.48e-01 | 100.0% | 94.0% |
| 4197655 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.91 | 87.0 | 7.83e-01 | 100.0% | 79.2% |
| 4530301 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.91 | 76.0 | 8.16e-01 | 97.8% | 100.0% |
| None | — | 0.91 | 67.0 | 6.50e-01 | 76.1% | 90.0% | |
| 3977037 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.90 | 86.0 | 8.02e-01 | 100.0% | 85.5% |
| 4064848 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.90 | 64.0 | 6.11e-01 | 72.8% | 83.8% |
| 4032735 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.90 | 68.0 | 6.51e-01 | 78.3% | 88.5% |
| 3947793 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.90 | 86.0 | 8.50e-01 | 100.0% | 98.9% |
| 4062728 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.89 | 79.0 | 7.98e-01 | 100.0% | 94.4% |
| 4991547 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.89 | 63.0 | 6.29e-01 | 72.8% | 88.3% |
| 4573033 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.89 | 78.0 | 7.97e-01 | 100.0% | 94.4% |
| 5000812 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.89 | 78.0 | 7.95e-01 | 98.9% | 93.3% |
| 4319199 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.89 | 77.0 | 8.07e-01 | 100.0% | 98.8% |
| 4514021 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.89 | 79.0 | 7.85e-01 | 100.0% | 90.5% |
| 3378937 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.89 | 66.0 | 6.43e-01 | 77.2% | 91.0% |
| 5018149 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.88 | 81.0 | 8.00e-01 | 98.9% | 92.6% |
| 3591088 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.88 | 66.0 | 6.87e-01 | 77.2% | 87.1% |
| 4024483 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.88 | 66.0 | 6.71e-01 | 77.2% | 92.1% |
| 5011018 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.87 | 68.0 | 6.72e-01 | 80.4% | 90.5% |
| 4055478 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.87 | 64.0 | 6.37e-01 | 76.1% | 88.4% |
| 1396369 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.87 | 76.0 | 7.91e-01 | 98.9% | 98.8% |
| 4957226 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.87 | 73.0 | 7.05e-01 | 98.9% | 80.0% |
| 5030359 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.86 | 71.0 | 7.62e-01 | 98.9% | 98.8% |
| 4173425 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.86 | 74.0 | 7.76e-01 | 100.0% | 97.6% |
| 4362625 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.86 | 76.0 | 7.75e-01 | 98.9% | 95.6% |
| 4071864 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.86 | 76.0 | 7.72e-01 | 100.0% | 95.6% |
| 4223411 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.85 | 79.0 | 7.80e-01 | 97.8% | 94.7% |
| 4932879 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.85 | 71.0 | 6.45e-01 | 85.9% | 92.2% |
| 4957227 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.85 | 75.0 | 7.66e-01 | 96.7% | 95.6% |
| 3744438 | 7.1.1.4 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › GRASP55_65 | 0.85 | 69.0 | 6.98e-01 | 93.5% | 86.7% |
| 3587706 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.84 | 76.0 | 7.73e-01 | 100.0% | 97.8% |
| 5004010 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.84 | 75.0 | 7.45e-01 | 95.7% | 90.5% |
| 4439947 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.84 | 76.0 | 7.23e-01 | 100.0% | 83.8% |
| 4400508 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.84 | 78.0 | 7.57e-01 | 100.0% | 90.0% |
| 3038064 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.84 | 76.0 | 7.62e-01 | 100.0% | 95.7% |
| 2754675 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.84 | 79.0 | 7.56e-01 | 98.9% | 95.1% |
| 3720043 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.84 | 69.0 | 6.53e-01 | 85.9% | 90.5% |
| 4134464 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.84 | 75.0 | 7.30e-01 | 100.0% | 88.0% |
| 4927416 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.83 | 77.0 | 5.90e-01 | 97.8% | 63.7% |
| 3988874 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 75.0 | 7.47e-01 | 100.0% | 92.6% |
| 3598871 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.83 | 70.0 | 6.78e-01 | 87.0% | 87.9% |
| 3964841 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.83 | 76.0 | 7.38e-01 | 100.0% | 89.0% |
| 4628116 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.83 | 75.0 | 7.13e-01 | 100.0% | 83.8% |
| 4949343 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.83 | 79.0 | 6.88e-01 | 100.0% | 70.8% |
| 2895779 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.83 | 73.0 | 7.53e-01 | 98.9% | 98.9% |
| 4054718 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.83 | 77.0 | 7.79e-01 | 100.0% | 100.0% |
| 3964843 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.83 | 75.0 | 7.50e-01 | 96.7% | 94.7% |
| 4070310 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.83 | 77.0 | 7.66e-01 | 98.9% | 96.8% |
| 4331476 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.82 | 78.0 | 7.42e-01 | 100.0% | 90.5% |
| 1945520 | 7.1.1.4 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › GRASP55_65 | 0.82 | 61.0 | 6.59e-01 | 78.3% | 90.0% |
| 4157342 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.82 | 77.0 | 6.94e-01 | 100.0% | 97.5% |
| 4479893 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.82 | 77.0 | 7.16e-01 | 100.0% | 87.3% |
| 3429748 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.82 | 67.0 | 6.37e-01 | 85.9% | 91.4% |
| 4077437 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.81 | 76.0 | 7.15e-01 | 100.0% | 84.5% |
| 5062176 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.81 | 75.0 | 6.14e-01 | 97.8% | 83.2% |
| 4984141 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.81 | 73.0 | 7.05e-01 | 100.0% | 87.0% |
| 4491850 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.81 | 75.0 | 7.46e-01 | 98.9% | 95.8% |
| None | — | 0.81 | 75.0 | 7.46e-01 | 98.9% | 98.9% | |
| 4938770 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.81 | 76.0 | 7.39e-01 | 100.0% | 96.0% |
| 3386702 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.81 | 75.0 | 7.40e-01 | 100.0% | 94.7% |
| 4969013 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.81 | 75.0 | 6.49e-01 | 98.9% | 73.3% |
| 4396837 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.81 | 75.0 | 6.71e-01 | 100.0% | 74.4% |
| 4676344 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.81 | 75.0 | 7.34e-01 | 100.0% | 93.0% |
| 5003948 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.80 | 76.0 | 7.08e-01 | 100.0% | 87.3% |
| 4432981 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.80 | 74.0 | 6.95e-01 | 98.9% | 87.3% |
| 1173733 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.80 | 65.0 | 6.30e-01 | 88.0% | 77.5% |
| 4200319 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.80 | 66.0 | 6.17e-01 | 87.0% | 92.7% |
| 4123279 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.80 | 69.0 | 7.20e-01 | 93.5% | 100.0% |
| 4096240 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.80 | 75.0 | 7.30e-01 | 100.0% | 93.0% |
| 4928855 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.80 | 70.0 | 6.43e-01 | 92.4% | 91.3% |
| 3839023 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.80 | 75.0 | 7.14e-01 | 100.0% | 88.6% |
| 3326442 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.79 | 62.0 | 6.14e-01 | 81.5% | 87.4% |
| 5083368 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.79 | 74.0 | 7.00e-01 | 97.8% | 88.6% |
| 3306810 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.79 | 65.0 | 6.02e-01 | 87.0% | 90.4% |
| 4931081 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.79 | 74.0 | 6.54e-01 | 97.8% | 84.0% |
| 4604072 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.79 | 72.0 | 6.99e-01 | 98.9% | 89.0% |
| 4942082 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.79 | 70.0 | 7.10e-01 | 96.7% | 95.6% |
| 4938036 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.79 | 70.0 | 6.40e-01 | 92.4% | 90.4% |
| 4015953 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.78 | 65.0 | 6.05e-01 | 87.0% | 93.6% |
| 3811308 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.78 | 67.0 | 6.63e-01 | 96.7% | 87.4% |
| 4994502 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.78 | 71.0 | 7.10e-01 | 97.8% | 97.9% |
| 4344951 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.78 | 63.0 | 6.27e-01 | 92.4% | 82.1% |
| 1068684 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.77 | 62.0 | 6.05e-01 | 83.7% | 87.8% |
| 3714673 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.77 | 70.0 | 6.63e-01 | 94.6% | 88.6% |
| 3626118 | 7.1.1.4 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › GRASP55_65 | 0.77 | 69.0 | 6.22e-01 | 97.8% | 72.5% |
| 3354230 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.77 | 65.0 | 6.28e-01 | 96.7% | 80.6% |
| 3625451 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.76 | 71.0 | 6.65e-01 | 100.0% | 94.5% |
| 3654497 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.76 | 66.0 | 5.73e-01 | 92.4% | 90.4% |
| 3759604 | 7.1.1.4 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › GRASP55_65 | 0.75 | 66.0 | 5.71e-01 | 98.9% | 63.7% |
| 3412241 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.75 | 65.0 | 6.60e-01 | 96.7% | 94.4% |
| 4962964 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.75 | 71.0 | 5.75e-01 | 100.0% | 79.4% |
| 4299173 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.75 | 69.0 | 4.59e-01 | 100.0% | 95.8% |
| 1123877 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.75 | 62.0 | 6.27e-01 | 94.6% | 88.9% |
| 4935017 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.75 | 70.0 | 6.22e-01 | 98.9% | 74.4% |
| 4577010 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.74 | 62.0 | 6.20e-01 | 91.3% | 86.3% |
| 3468612 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.74 | 65.0 | 6.17e-01 | 92.4% | 89.5% |
| 3808085 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.72 | 62.0 | 6.05e-01 | 94.6% | 84.0% |
D2
high
residues 223-301
Domain cluster:
rep: SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00319__D987-1069
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00595.30 | PDZ | 31.1 | 3.50e-07 | 81.0% | 54.3% |
| PF13180.13 best | PDZ_2 | 31.2 | 2.90e-07 | 81.0% | 80.0% |
| PF17820.8 | PDZ_6 | 37.3 | 2.40e-09 | 68.3% | 100.0% |
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y8tA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.96 | 80.0 | 7.62e-01 | 86.1% | 79.5% |
| 7w6yA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.94 | 84.0 | 8.35e-01 | 94.9% | 90.1% |
| 4yo1A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.94 | 77.0 | 7.12e-01 | 84.8% | 71.6% |
| 2zpmA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.94 | 88.0 | 8.53e-01 | 100.0% | 90.7% |
| 5m3nA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.94 | 74.0 | 6.83e-01 | 84.8% | 67.0% |
| 2p3wB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.93 | 76.0 | 7.01e-01 | 87.3% | 69.8% |
| 1ky9B03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.92 | 74.0 | 6.87e-01 | 84.8% | 70.2% |
| 3pv2A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.91 | 70.0 | 6.72e-01 | 81.0% | 71.6% |
| 5t69A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.91 | 75.0 | 6.66e-01 | 87.3% | 64.2% |
| 7co7D03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.91 | 73.0 | 6.85e-01 | 84.8% | 72.3% |
| 6iccA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.91 | 83.0 | 8.00e-01 | 100.0% | 88.4% |
| 1te0A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.89 | 75.0 | 6.88e-01 | 89.9% | 72.0% |
| 3qo6A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.89 | 73.0 | 6.65e-01 | 87.3% | 79.4% |
| 6ieoA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.87 | 77.0 | 7.18e-01 | 94.9% | 78.7% |
| 4c2dA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.86 | 71.0 | 6.68e-01 | 87.3% | 78.5% |
| 4fgmA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.85 | 71.0 | 6.44e-01 | 88.6% | 68.0% |
| 3wkmB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.84 | 77.0 | 7.20e-01 | 100.0% | 81.9% |
| 2zplB00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.84 | 78.0 | 7.31e-01 | 100.0% | 89.4% |
| 7xs0A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 63.0 | 6.18e-01 | 78.5% | 75.9% |
| 4l8nA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.82 | 68.0 | 6.35e-01 | 87.3% | 76.6% |
| 2kjkA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.82 | 72.0 | 6.65e-01 | 100.0% | 76.0% |
| 3rleA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 77.0 | 6.91e-01 | 100.0% | 76.0% |
| 2hgaA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 70.0 | 6.84e-01 | 100.0% | 85.9% |
| 4jj0B00 | 2.30.42.60 | Mainly Beta › Roll › Pdz3 Domain › | 0.81 | 69.0 | 5.14e-01 | 98.7% | 39.4% |
| 2kbsA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 55.0 | 5.27e-01 | 70.9% | 60.9% |
| 7w6zA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.80 | 74.0 | 6.93e-01 | 100.0% | 88.3% |
| 4edjA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.79 | 72.0 | 6.66e-01 | 100.0% | 78.6% |
| 1r6jA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.79 | 54.0 | 5.39e-01 | 70.9% | 69.5% |
| 2l97A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.79 | 63.0 | 5.87e-01 | 94.9% | 68.7% |
| 3qikA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.79 | 54.0 | 5.30e-01 | 70.9% | 71.4% |
| 4ghnA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.78 | 64.0 | 5.79e-01 | 87.3% | 81.0% |
| 4o06A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.78 | 72.0 | 6.53e-01 | 100.0% | 76.5% |
| 1uewA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.76 | 53.0 | 4.63e-01 | 72.2% | 51.8% |
| 1k32A04 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.74 | 68.0 | 6.34e-01 | 98.7% | 83.2% |
| 1g29102 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 34.0 | 4.42e-01 | 79.7% | 77.8% |
| 3k50A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.72 | 63.0 | 5.79e-01 | 98.7% | 74.0% |
| 2kjpA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.71 | 61.0 | 6.19e-01 | 98.7% | 96.2% |
| 2i6vA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.71 | 55.0 | 5.33e-01 | 82.3% | 75.9% |
| 4flnA02 | 3.20.190.20 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › | 0.65 | 58.0 | 4.67e-01 | 98.7% | 53.3% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.58 | 45.0 | 4.34e-01 | 100.0% | 72.2% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 36.0 | 3.69e-01 | 100.0% | 67.1% |
| 3i3lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 42.0 | 2.69e-01 | 92.4% | 79.1% |
| 1cr2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 41.0 | 3.08e-01 | 97.5% | 92.5% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3587706 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.99 | 95.0 | 8.97e-01 | 100.0% | 86.7% |
| 4628116 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.98 | 94.0 | 8.33e-01 | 100.0% | 74.3% |
| 3964841 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.98 | 95.0 | 8.60e-01 | 100.0% | 79.0% |
| 4134464 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.98 | 94.0 | 8.49e-01 | 100.0% | 78.0% |
| 4439947 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.98 | 94.0 | 8.30e-01 | 100.0% | 74.3% |
| 4400508 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.98 | 94.0 | 8.53e-01 | 100.0% | 79.0% |
| 4491850 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.96 | 93.0 | 8.57e-01 | 100.0% | 86.3% |
| 4396837 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.96 | 92.0 | 7.65e-01 | 100.0% | 66.4% |
| 4676344 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.96 | 92.0 | 8.34e-01 | 100.0% | 83.0% |
| 4319199 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.96 | 86.0 | 8.41e-01 | 100.0% | 87.1% |
| 3038064 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.95 | 90.0 | 8.49e-01 | 100.0% | 84.8% |
| 4414389 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.95 | 79.0 | 7.06e-01 | 88.6% | 65.4% |
| 2895779 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.95 | 89.0 | 8.53e-01 | 100.0% | 88.5% |
| 4378590 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.94 | 79.0 | 7.05e-01 | 87.3% | 66.7% |
| 5033889 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.94 | 81.0 | 7.30e-01 | 88.6% | 71.0% |
| 3839472 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.94 | 81.0 | 7.24e-01 | 89.9% | 68.6% |
| 1396369 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.94 | 87.0 | 8.38e-01 | 100.0% | 88.4% |
| 5030359 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.94 | 80.0 | 7.97e-01 | 100.0% | 87.5% |
| 3918032 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.94 | 76.0 | 6.79e-01 | 87.3% | 63.8% |
| 5011018 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.93 | 76.0 | 7.06e-01 | 84.8% | 70.5% |
| 4032735 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.93 | 75.0 | 6.70e-01 | 83.5% | 65.4% |
| 4077437 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.93 | 90.0 | 7.81e-01 | 100.0% | 75.5% |
| 4054718 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.93 | 88.0 | 8.40e-01 | 100.0% | 87.8% |
| 4928855 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.93 | 78.0 | 6.67e-01 | 87.3% | 74.8% |
| 3963500 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.93 | 73.0 | 6.66e-01 | 84.8% | 65.0% |
| 4957226 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.92 | 77.0 | 7.02e-01 | 100.0% | 69.0% |
| 4573033 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.92 | 83.0 | 7.93e-01 | 100.0% | 83.3% |
| 5000812 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.92 | 83.0 | 7.91e-01 | 100.0% | 83.3% |
| 4157342 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.92 | 88.0 | 7.41e-01 | 100.0% | 89.2% |
| 3378937 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.92 | 73.0 | 6.62e-01 | 82.3% | 66.0% |
| 5012094 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.92 | 78.0 | 7.59e-01 | 100.0% | 82.4% |
| 4514021 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.92 | 84.0 | 7.82e-01 | 100.0% | 80.0% |
| 166194 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.92 | 77.0 | 6.73e-01 | 89.9% | 62.7% |
| 4070310 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.92 | 86.0 | 8.03e-01 | 100.0% | 87.4% |
| 4123279 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.91 | 87.0 | 8.49e-01 | 100.0% | 95.3% |
| 3288609 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.91 | 84.0 | 7.52e-01 | 100.0% | 73.3% |
| 4986682 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.91 | 84.0 | 8.19e-01 | 100.0% | 90.6% |
| 3823056 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.91 | 87.0 | 8.07e-01 | 100.0% | 84.2% |
| 4931081 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.91 | 79.0 | 6.58e-01 | 100.0% | 57.6% |
| 4062728 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.91 | 82.0 | 7.77e-01 | 100.0% | 83.3% |
| 4604072 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.91 | 87.0 | 7.86e-01 | 100.0% | 79.0% |
| 4071864 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.91 | 83.0 | 7.89e-01 | 100.0% | 84.4% |
| 3429748 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.90 | 76.0 | 6.81e-01 | 88.6% | 67.6% |
| 3738463 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.90 | 73.0 | 6.41e-01 | 86.1% | 60.9% |
| 4096240 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.90 | 86.0 | 7.78e-01 | 100.0% | 83.0% |
| 4024483 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.90 | 71.0 | 6.79e-01 | 82.3% | 73.0% |
| 5012619 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.90 | 83.0 | 7.90e-01 | 100.0% | 85.6% |
| 5054965 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.90 | 83.0 | 7.02e-01 | 100.0% | 64.2% |
| 3654497 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.90 | 76.0 | 6.15e-01 | 98.7% | 51.9% |
| 4530301 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.90 | 77.0 | 7.75e-01 | 100.0% | 90.0% |
| 4969013 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.90 | 84.0 | 6.84e-01 | 100.0% | 63.0% |
| 4935017 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.89 | 72.0 | 6.04e-01 | 100.0% | 53.6% |
| 4200319 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.89 | 75.0 | 6.59e-01 | 98.7% | 63.6% |
| 4418858 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.89 | 75.0 | 6.49e-01 | 98.7% | 60.9% |
| 5004010 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.89 | 84.0 | 7.81e-01 | 100.0% | 84.2% |
| 3306810 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.89 | 75.0 | 6.46e-01 | 98.7% | 60.9% |
| 4015953 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.89 | 74.0 | 6.48e-01 | 88.6% | 62.7% |
| 4331476 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.89 | 84.0 | 7.48e-01 | 100.0% | 81.0% |
| 4938770 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.88 | 83.0 | 7.55e-01 | 100.0% | 80.0% |
| 4967626 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.88 | 78.0 | 7.14e-01 | 100.0% | 74.0% |
| 5080037 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.88 | 82.0 | 6.56e-01 | 100.0% | 66.9% |
| 3598871 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.88 | 75.0 | 6.88e-01 | 89.9% | 71.7% |
| 4957227 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.88 | 83.0 | 7.90e-01 | 100.0% | 87.8% |
| None | — | 0.88 | 83.0 | 7.71e-01 | 100.0% | 89.5% | |
| 2754677 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.88 | 83.0 | 7.63e-01 | 100.0% | 92.8% |
| 5006741 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.87 | 82.0 | 7.83e-01 | 100.0% | 87.8% |
| 5018151 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.87 | 82.0 | 7.62e-01 | 100.0% | 91.6% |
| 4949343 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.87 | 81.0 | 6.70e-01 | 100.0% | 63.1% |
| 4432981 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.87 | 82.0 | 7.17e-01 | 100.0% | 77.3% |
| 4549433 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.86 | 81.0 | 7.75e-01 | 100.0% | 88.9% |
| 5017398 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.86 | 73.0 | 6.96e-01 | 100.0% | 78.9% |
| 4962965 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.86 | 79.0 | 6.26e-01 | 100.0% | 52.0% |
| 4967628 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.86 | 78.0 | 7.58e-01 | 100.0% | 89.4% |
| 1173733 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.85 | 71.0 | 6.46e-01 | 88.6% | 68.6% |
| 3591088 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.85 | 66.0 | 6.47e-01 | 82.3% | 78.8% |
| 4562453 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.84 | 79.0 | 7.24e-01 | 100.0% | 84.0% |
| 4927416 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.84 | 78.0 | 5.72e-01 | 100.0% | 44.7% |
| 4173425 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.83 | 72.0 | 7.05e-01 | 100.0% | 85.9% |
| 3038843 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.83 | 64.0 | 5.86e-01 | 81.0% | 64.4% |
| 3509904 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.83 | 66.0 | 6.45e-01 | 84.8% | 82.4% |
| 3947793 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.83 | 77.0 | 7.21e-01 | 100.0% | 88.4% |
| 3969766 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.83 | 77.0 | 7.02e-01 | 100.0% | 85.0% |
| 4055478 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.83 | 63.0 | 5.95e-01 | 81.0% | 67.4% |
| 4962964 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.82 | 71.0 | 5.46e-01 | 100.0% | 45.0% |
| 3468612 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.82 | 67.0 | 6.08e-01 | 87.3% | 65.7% |
| 3608238 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.82 | 67.0 | 6.64e-01 | 96.2% | 83.1% |
| 3744438 | 7.1.1.4 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › GRASP55_65 | 0.82 | 72.0 | 6.88e-01 | 100.0% | 82.2% |
| 3759604 | 7.1.1.4 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › GRASP55_65 | 0.80 | 74.0 | 6.02e-01 | 100.0% | 57.0% |
| 3354230 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.80 | 72.0 | 6.54e-01 | 100.0% | 73.8% |
| 3535221 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.80 | 73.0 | 6.66e-01 | 100.0% | 77.0% |
| 4886306 | 4070.1.1.7 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › PDZ_6 | 0.80 | 73.0 | 6.92e-01 | 100.0% | 85.6% |
| 3811308 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.80 | 72.0 | 6.69e-01 | 100.0% | 80.0% |
| 3787919 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.79 | 74.0 | 7.05e-01 | 100.0% | 87.8% |
| 3629768 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.79 | 72.0 | 6.86e-01 | 100.0% | 85.6% |
| 5027944 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.79 | 73.0 | 6.46e-01 | 100.0% | 71.8% |
| 3412241 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.79 | 72.0 | 6.92e-01 | 100.0% | 86.7% |
| 1285704 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.78 | 72.0 | 6.80e-01 | 100.0% | 84.8% |
| 3236097 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.78 | 71.0 | 6.90e-01 | 100.0% | 90.6% |
| 3268409 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.76 | 70.0 | 6.56e-01 | 100.0% | 91.6% |
| 3948384 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 45.0 | 4.06e-01 | 94.9% | 83.5% |
D3
medium
residues 26-92
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02163.29 best | Peptidase_M50 | 50.2 | 3.10e-13 | 97.0% | 22.6% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aq1B02 | 3.30.260.10 | Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain | 0.53 | 37.0 | 3.31e-01 | 76.1% | 51.8% |
| 5c68A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 40.0 | 3.51e-01 | 86.6% | 72.5% |
| 6ks6Z02 | 3.30.260.10 | Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain | 0.50 | 35.0 | 3.15e-01 | 76.1% | 54.2% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941491 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.99 | 94.0 | 5.96e-01 | 100.0% | 25.4% |
| 4478094 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.98 | 72.0 | 4.76e-01 | 100.0% | 22.7% |
| 4420884 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.98 | 91.0 | 6.18e-01 | 100.0% | 32.5% |
| 3590892 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.93 | 72.0 | 4.72e-01 | 100.0% | 22.5% |
| 4320349 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.92 | 88.0 | 5.68e-01 | 100.0% | 30.4% |
| 4184406 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.92 | 86.0 | 5.56e-01 | 100.0% | 25.9% |
| 3284640 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.90 | 84.0 | 5.32e-01 | 100.0% | 23.6% |
| 4165654 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.89 | 77.0 | 5.07e-01 | 100.0% | 25.5% |
| 3366512 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.89 | 81.0 | 5.27e-01 | 100.0% | 25.5% |
| 4562044 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.88 | 84.0 | 5.46e-01 | 100.0% | 29.0% |
| 4315636 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.86 | 81.0 | 5.55e-01 | 100.0% | 35.5% |
| 3839024 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.85 | 80.0 | 5.40e-01 | 100.0% | 31.4% |
| 3386701 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.84 | 79.0 | 5.21e-01 | 100.0% | 28.1% |
| 4429065 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.84 | 80.0 | 5.18e-01 | 100.0% | 29.0% |
| 4062727 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.83 | 78.0 | 5.23e-01 | 100.0% | 32.7% |
| 3946257 | 10.12.1.85 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_6 | 0.56 | 44.0 | 3.24e-01 | 88.1% | 85.8% |
| 4145939 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.55 | 28.0 | 2.85e-01 | 80.6% | 42.9% |
| 4928227 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.54 | 30.0 | 2.94e-01 | 88.1% | 45.2% |
| 3784608 | 221.4.1.7 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › MRP-L46 | 0.53 | 42.0 | 2.92e-01 | 92.5% | 47.1% |
| 3653144 | 2498.5.1.0 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like | 0.52 | 39.0 | 3.17e-01 | 83.6% | 46.2% |
| 5053969 | 2498.5.1.1 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like › Cpn60_TCP1 | 0.51 | 37.0 | 3.26e-01 | 79.1% | 52.7% |
| 4234965 | 2498.5.1.1 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like › Cpn60_TCP1 | 0.51 | 36.0 | 3.12e-01 | 76.1% | 51.3% |
| 5031953 | 2498.5.1.1 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like › Cpn60_TCP1 | 0.51 | 36.0 | 3.17e-01 | 79.1% | 52.2% |
| 4976104 | 2498.5.1.0 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like | 0.50 | 36.0 | 3.19e-01 | 79.1% | 52.7% |
| 3598941 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.50 | 41.0 | 2.89e-01 | 98.5% | 49.1% |
| 4967762 | 2498.5.1.0 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like | 0.50 | 34.0 | 3.11e-01 | 74.6% | 56.2% |
D4
medium
residues 93-124_323-451
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02163.29 best | Peptidase_M50 | 145.9 | 1.60e-42 | 92.5% | 65.6% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fewA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 37.0 | 3.61e-01 | 79.5% | 43.9% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.70 | 32.0 | 3.93e-01 | 78.3% | 65.1% |
| 1u5pA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 31.0 | 3.66e-01 | 79.5% | 63.9% |
| 5dqqA01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.62 | 31.0 | 3.43e-01 | 94.4% | 57.0% |
| 3u8vA00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.62 | 21.0 | 2.89e-01 | 77.0% | 55.4% |
| 5k3hB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.61 | 34.0 | 3.76e-01 | 88.2% | 66.2% |
| 3kkbA00 | 1.20.120.880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain | 0.59 | 34.0 | 3.82e-01 | 100.0% | 70.6% |
| 5h5mA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.58 | 33.0 | 3.69e-01 | 90.7% | 69.2% |
| 4q5rA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 31.0 | 3.65e-01 | 83.9% | 76.8% |
| 1xzpA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.56 | 35.0 | 3.52e-01 | 100.0% | 59.0% |
| 2w31A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 39.0 | 4.08e-01 | 93.2% | 78.3% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 36.0 | 3.65e-01 | 81.4% | 67.9% |
| 2etdA00 | 1.20.1440.20 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain | 0.53 | 41.0 | 4.40e-01 | 79.5% | 90.8% |
| 4q5nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 30.0 | 3.57e-01 | 83.9% | 78.6% |
| 1u7gA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.53 | 44.0 | 3.34e-01 | 87.6% | 90.9% |
| 2z0qA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.53 | 48.0 | 4.52e-01 | 100.0% | 93.3% |
| 6me6B02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 36.0 | 3.06e-01 | 100.0% | 40.0% |
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.53 | 35.0 | 4.11e-01 | 75.8% | 95.5% |
| 3m9vA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.52 | 34.0 | 3.49e-01 | 97.5% | 67.5% |
| 1s4kA00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.51 | 35.0 | 3.95e-01 | 87.6% | 93.3% |
| 4p9tA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.51 | 31.0 | 3.51e-01 | 100.0% | 79.2% |
| 5jajA03 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.50 | 29.0 | 3.33e-01 | 91.3% | 75.9% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4420884 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 1.00 | 69.0 | 6.28e-01 | 97.5% | 56.5% |
| 3386701 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.99 | 90.0 | 7.62e-01 | 96.9% | 63.4% |
| 4478094 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.99 | 93.0 | 8.01e-01 | 98.8% | 68.4% |
| 4562044 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.98 | 91.0 | 7.63e-01 | 95.7% | 62.0% |
| 3941491 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.98 | 94.0 | 7.65e-01 | 96.9% | 64.6% |
| 4315636 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.97 | 70.0 | 6.38e-01 | 96.3% | 59.0% |
| 4320349 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.97 | 90.0 | 7.44e-01 | 97.5% | 60.8% |
| 4429065 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.96 | 89.0 | 7.45e-01 | 98.1% | 62.4% |
| 3839024 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.95 | 72.0 | 6.44e-01 | 98.8% | 59.0% |
| 4165654 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.95 | 89.0 | 7.56e-01 | 100.0% | 64.9% |
| 3590892 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.95 | 92.0 | 7.82e-01 | 100.0% | 68.3% |
| 4038232 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.95 | 86.0 | 7.61e-01 | 96.3% | 69.8% |
| 4062727 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.94 | 72.0 | 6.34e-01 | 98.1% | 57.3% |
| 4568331 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.93 | 90.0 | 7.67e-01 | 100.0% | 67.9% |
| 4184406 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.93 | 90.0 | 7.49e-01 | 100.0% | 65.1% |
| 4031113 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.93 | 87.0 | 8.77e-01 | 96.9% | 100.0% |
| 3366512 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.91 | 84.0 | 7.04e-01 | 96.9% | 66.3% |
| 4938083 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.82 | 51.0 | 4.29e-01 | 96.3% | 38.8% |
| 4934446 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.72 | 48.0 | 4.10e-01 | 98.8% | 43.2% |
| 5056298 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.70 | 53.0 | 4.75e-01 | 96.3% | 56.8% |
| 4984140 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.68 | 46.0 | 4.07e-01 | 96.9% | 49.5% |
| 5056869 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 35.0 | 3.45e-01 | 79.5% | 48.0% |
| 5080036 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.64 | 46.0 | 4.21e-01 | 96.9% | 55.8% |
| 4970582 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.61 | 48.0 | 4.10e-01 | 100.0% | 51.5% |
| 4012748 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.56 | 34.0 | 2.69e-01 | 78.9% | 30.6% |
| 3715891 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.56 | 38.0 | 3.82e-01 | 79.5% | 67.9% |
| 4935333 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.56 | 35.0 | 3.66e-01 | 80.1% | 67.3% |
| 3298709 | 605.1.1.141 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Rx_N | 0.55 | 32.0 | 3.61e-01 | 87.0% | 72.8% |
| 3634099 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.55 | 45.0 | 3.94e-01 | 87.6% | 89.4% |
| 5012424 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.55 | 40.0 | 3.88e-01 | 79.5% | 66.3% |
| 3531347 | 109.4.1.498 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4487 | 0.54 | 37.0 | 3.40e-01 | 87.0% | 52.1% |
| 5046568 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.54 | 36.0 | 3.56e-01 | 100.0% | 61.8% |
| 3691817 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.54 | 45.0 | 4.02e-01 | 89.4% | 97.4% |
| 3196756 | 3755.3.1.455 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF202 | 0.54 | 42.0 | 4.42e-01 | 95.7% | 90.3% |
| 3216813 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 45.0 | 3.85e-01 | 91.3% | 90.4% |
| 4990233 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.53 | 46.0 | 3.90e-01 | 93.2% | 91.9% |
| 5057941 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.53 | 32.0 | 3.24e-01 | 93.8% | 55.9% |
| 3394243 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 41.0 | 3.78e-01 | 86.3% | 92.3% |
| 3206380 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.52 | 40.0 | 3.91e-01 | 80.7% | 78.9% |