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CAKLQF020000007.1__CAH1081767.1__SAMEA5780031_01721__00127
Bact-VirCAKLQF020000007.1__CAH1081767.1__SAMEA5780031_01721__00127
Identity
- Kingdom:
- phage
Quality
76.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 394-466
Domain cluster:
rep: LR597641.1__VUF53985.1__X__00049__D50-130
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13103.12 best | TonB_2 | 45.8 | 7.30e-12 | 97.3% | 68.2% |
| PF03544.20 | TonB_C | 32.4 | 1.40e-07 | 93.2% | 65.8% |
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g7xB00 | 3.30.1150.10 | Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › | 0.88 | 82.0 | 7.25e-01 | 100.0% | 73.5% |
| 1lr0A00 | 3.30.1150.10 | Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › | 0.88 | 81.0 | 6.64e-01 | 100.0% | 61.1% |
| 1u07B00 | 3.30.2420.10 | Alpha Beta › 2-Layer Sandwich › TolA/TonB C-terminal domain › TonB | 0.79 | 70.0 | 6.56e-01 | 100.0% | 79.5% |
| 2k9kA00 | 3.30.1150.10 | Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › | 0.76 | 69.0 | 6.05e-01 | 100.0% | 71.7% |
| 1s62A00 | 3.30.1150.10 | Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › | 0.74 | 66.0 | 5.89e-01 | 100.0% | 72.5% |
| 2m2kA00 | 3.30.1150.10 | Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › | 0.68 | 60.0 | 4.97e-01 | 100.0% | 58.0% |
| 1ifqB00 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.63 | 51.0 | 4.29e-01 | 89.0% | 60.9% |
| 3k5iA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.62 | 51.0 | 3.75e-01 | 90.4% | 36.4% |
| 6j7xC01 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.62 | 47.0 | 3.94e-01 | 84.9% | 58.6% |
| 3hrdB02 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.61 | 51.0 | 4.06e-01 | 93.2% | 100.0% |
| 3wnzA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.60 | 52.0 | 4.20e-01 | 97.3% | 57.6% |
| 3qwnD01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.60 | 39.0 | 4.06e-01 | 87.7% | 70.0% |
| 4zohA05 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.59 | 49.0 | 4.00e-01 | 94.5% | 96.6% |
| 4clcA00 | 3.30.450.150 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain | 0.59 | 48.0 | 3.69e-01 | 90.4% | 57.4% |
| 2ia1A01 | 3.30.500.20 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › BH3703-like domains | 0.58 | 50.0 | 4.33e-01 | 100.0% | 76.5% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.58 | 44.0 | 3.97e-01 | 86.3% | 89.2% |
| 2xa7M01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 47.0 | 3.99e-01 | 89.0% | 58.3% |
| 2j3wC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 44.0 | 3.69e-01 | 87.7% | 60.7% |
| 1w63Q00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 43.0 | 3.49e-01 | 84.9% | 49.3% |
| 3cueC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 42.0 | 3.49e-01 | 89.0% | 100.0% |
| 2j3tD01 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 42.0 | 3.53e-01 | 87.7% | 94.0% |
| 4bkwA03 | 3.30.500.40 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.53 | 43.0 | 3.70e-01 | 100.0% | 54.8% |
| 1skoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.52 | 41.0 | 3.63e-01 | 89.0% | 68.1% |
| 2hf6A00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 42.0 | 3.44e-01 | 91.8% | 49.7% |
| 4fixA01 | 3.90.550.60 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.51 | 36.0 | 2.33e-01 | 75.3% | 59.3% |
| 5hnoA00 | 2.70.50.60 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › abc- transporter (atp binding component) like domain | 0.51 | 40.0 | 3.18e-01 | 89.0% | 62.2% |
| 6i3mG01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.51 | 36.0 | 2.50e-01 | 75.3% | 97.1% |
| 8alzB04 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.50 | 38.0 | 3.42e-01 | 84.9% | 88.2% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.50 | 39.0 | 3.34e-01 | 89.0% | 89.4% |
| 3ms6A00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.50 | 39.0 | 3.71e-01 | 89.0% | 81.1% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3974767 | 272.1.1.0 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain | 0.89 | 83.0 | 7.50e-01 | 100.0% | 81.1% |
| 3166161 | 272.1.1.2 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA | 0.89 | 79.0 | 7.48e-01 | 98.6% | 82.4% |
| 152223 | 272.1.1.2 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA | 0.88 | 82.0 | 7.25e-01 | 100.0% | 73.5% |
| 5945 | 272.1.1.3 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_2 | 0.88 | 81.0 | 6.64e-01 | 100.0% | 61.1% |
| 3972969 | 272.1.1.0 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain | 0.88 | 83.0 | 7.47e-01 | 100.0% | 83.2% |
| 4289847 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.85 | 79.0 | 7.19e-01 | 100.0% | 81.1% |
| 3385499 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.85 | 79.0 | 7.17e-01 | 100.0% | 82.1% |
| 4628638 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.83 | 77.0 | 7.10e-01 | 100.0% | 80.0% |
| 3942685 | 272.1.1.2 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA | 0.83 | 71.0 | 6.26e-01 | 97.3% | 64.8% |
| 4338610 | 272.1.1.0 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain | 0.83 | 73.0 | 7.10e-01 | 100.0% | 87.3% |
| 3964903 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.83 | 73.0 | 7.31e-01 | 100.0% | 92.0% |
| 3839673 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.82 | 76.0 | 6.46e-01 | 100.0% | 65.5% |
| 4096220 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.81 | 74.0 | 6.77e-01 | 100.0% | 76.8% |
| 4324302 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.81 | 74.0 | 7.26e-01 | 100.0% | 94.9% |
| 3970711 | 272.1.1.0 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain | 0.79 | 73.0 | 6.85e-01 | 100.0% | 85.2% |
| 4549660 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.79 | 73.0 | 7.09e-01 | 100.0% | 93.8% |
| 3967921 | 272.1.1.3 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_2 | 0.78 | 68.0 | 6.58e-01 | 94.5% | 85.0% |
| 2899924 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.78 | 69.0 | 6.51e-01 | 100.0% | 80.5% |
| 2391752 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.77 | 71.0 | 6.34e-01 | 100.0% | 75.8% |
| 1161117 | 272.1.1.2 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA | 0.77 | 69.0 | 6.37e-01 | 100.0% | 78.5% |
| 3840130 | 272.1.1.3 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_2 | 0.76 | 65.0 | 6.20e-01 | 100.0% | 81.2% |
| 2599555 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.76 | 69.0 | 6.00e-01 | 100.0% | 67.3% |
| 3974076 | 272.1.1.0 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain | 0.76 | 70.0 | 6.02e-01 | 100.0% | 79.1% |
| 3968588 | 272.1.1.3 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_2 | 0.74 | 65.0 | 6.22e-01 | 100.0% | 83.5% |
| 3386099 | 272.1.1.3 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_2 | 0.72 | 61.0 | 5.82e-01 | 97.3% | 81.2% |
| 4225807 | 272.1.1.0 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain | 0.71 | 58.0 | 6.06e-01 | 90.4% | 100.0% |
| 1393818 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.68 | 60.0 | 5.39e-01 | 100.0% | 74.5% |
| 3970590 | 272.1.1.0 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain | 0.68 | 58.0 | 5.14e-01 | 97.3% | 75.5% |
| 3167378 | 223.2.1.8 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin | 0.67 | 51.0 | 3.82e-01 | 82.2% | 58.7% |
| 3787986 | 223.2.1.8 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin | 0.64 | 50.0 | 3.96e-01 | 83.6% | 62.2% |
| 3471938 | 223.2.1.8 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin | 0.63 | 49.0 | 3.84e-01 | 83.6% | 63.7% |
| 3800869 | 223.2.1.15 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin | 0.62 | 48.0 | 3.67e-01 | 84.9% | 42.8% |
| 4928123 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 47.0 | 3.98e-01 | 84.9% | 69.2% |
| 5074674 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 47.0 | 3.86e-01 | 84.9% | 52.9% |
| 3897014 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.60 | 48.0 | 4.58e-01 | 87.7% | 83.5% |
| 4943690 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 46.0 | 3.75e-01 | 84.9% | 53.8% |
| 4969909 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 47.0 | 3.77e-01 | 87.7% | 56.0% |
| 4998374 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 47.0 | 3.92e-01 | 84.9% | 59.2% |
| 5052027 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 46.0 | 3.90e-01 | 84.9% | 62.4% |
| 5076068 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.59 | 46.0 | 4.18e-01 | 87.7% | 72.4% |
| 4947696 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 46.0 | 3.78e-01 | 83.6% | 58.5% |
| 3364335 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.58 | 46.0 | 3.61e-01 | 89.0% | 44.2% |
| 4944879 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 47.0 | 4.54e-01 | 90.4% | 89.4% |
| 4927211 | 223.2.1.62 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DUF6659 | 0.57 | 43.0 | 3.76e-01 | 84.9% | 70.0% |
| 3175956 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 45.0 | 3.63e-01 | 86.3% | 87.9% |
| 5074455 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 43.0 | 3.85e-01 | 84.9% | 66.4% |
| 5046979 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 42.0 | 3.72e-01 | 83.6% | 100.0% |
| 4023939 | 223.2.1.8 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin | 0.55 | 42.0 | 3.45e-01 | 86.3% | 65.5% |
| 4155354 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.55 | 42.0 | 3.72e-01 | 89.0% | 84.2% |
| 5045803 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 42.0 | 3.57e-01 | 86.3% | 95.3% |
| 5047827 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 42.0 | 3.60e-01 | 89.0% | 61.5% |
| 4942976 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 36.0 | 2.79e-01 | 87.7% | 33.5% |
| 4930907 | 4139.1.1.1 ↗ | a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like › AMMECR1 | 0.52 | 42.0 | 3.56e-01 | 90.4% | 81.6% |
| 4943133 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 40.0 | 3.45e-01 | 89.0% | 62.3% |
| 3511415 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.51 | 40.0 | 3.28e-01 | 90.4% | 84.7% |
D2
medium
residues 103-258
Domain cluster:
representative
D3
medium
residues 294-375
Domain cluster:
representative