←Back to structures

CAKLQF020000008.1__CAH1081887.1__SAMEA5780031_01782__00027

Bact-Vir

CAKLQF020000008.1__CAH1081887.1__SAMEA5780031_01782__00027

Identity

Kingdom:
phage

Quality

85.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-86_174-194
PDB
Domain cluster: representative
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pjuC01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.85 77.0 7.76e-01 100.0% 97.0%
4pyrA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.82 75.0 6.10e-01 98.0% 81.5%
4rxuA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.81 74.0 6.46e-01 98.0% 83.0%
2q5cA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.81 69.0 7.06e-01 99.0% 95.9%
4ywhA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.80 73.0 6.41e-01 98.0% 83.4%
1abeA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.80 73.0 6.49e-01 98.0% 89.9%
3gbvA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.79 71.0 6.34e-01 97.0% 90.0%
3e61B01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.79 69.0 6.82e-01 93.1% 99.0%
1ba2A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.79 71.0 6.62e-01 98.0% 92.8%
4ry8A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.79 71.0 6.21e-01 98.0% 80.4%
3ksmA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.79 71.0 6.59e-01 98.0% 94.4%
4ru1A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.79 71.0 6.32e-01 98.0% 87.9%
4p98A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 71.0 6.23e-01 98.0% 84.0%
3d8uB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 70.0 6.62e-01 97.0% 95.0%
3ckmA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 70.0 5.74e-01 97.0% 83.1%
3g85A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 70.0 6.21e-01 98.0% 86.0%
3tcrA00 3.40.980.10 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain 0.77 70.0 6.02e-01 100.0% 96.2%
3l49A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.77 69.0 6.39e-01 98.0% 91.5%
4rk6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.77 69.0 6.36e-01 97.0% 91.3%
4ycsA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.77 67.0 6.30e-01 96.0% 96.7%
4y9tA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 68.0 6.03e-01 98.0% 80.0%
2x7xA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 68.0 6.23e-01 97.0% 89.2%
4rweA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 68.0 6.28e-01 98.0% 91.4%
2hqbA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 66.0 6.06e-01 95.0% 88.5%
2bonA01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.76 66.0 6.11e-01 95.0% 89.1%
2fqxA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.75 67.0 6.15e-01 98.0% 90.1%
3jvdB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.75 68.0 6.33e-01 98.0% 88.5%
1e5dA01 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.71 61.0 5.46e-01 95.0% 99.3%
3s40A01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.71 63.0 5.74e-01 98.0% 93.2%
6dqoA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.71 61.0 5.14e-01 96.0% 98.8%
2i0fA00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.70 62.0 5.54e-01 100.0% 95.2%
7yosA01 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.70 57.0 4.62e-01 88.1% 64.9%
2i2xB02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.70 62.0 5.65e-01 99.0% 88.3%
4j07A00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.70 62.0 5.44e-01 100.0% 89.5%
2gm3A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.70 52.0 4.55e-01 79.2% 90.2%
3czcA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 58.0 5.98e-01 93.1% 98.9%
3fbtA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.69 62.0 5.57e-01 98.0% 82.1%
3kloA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 60.0 5.34e-01 95.0% 84.7%
4d02A02 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.69 57.0 5.11e-01 90.1% 100.0%
3bilA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 62.0 5.56e-01 97.0% 86.1%
4myrC00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 61.0 5.66e-01 97.0% 98.4%
4maaA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 56.0 4.68e-01 87.1% 67.1%
3lkbA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 54.0 4.60e-01 85.1% 84.4%
3kyiB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 60.0 6.01e-01 97.0% 97.1%
4ldaB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 61.0 5.68e-01 100.0% 97.6%
3n0wA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 55.0 5.05e-01 87.1% 81.8%
4c5cA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 49.0 5.34e-01 76.2% 95.2%
1npdB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.67 59.0 5.30e-01 97.0% 84.1%
3oziB00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.67 58.0 4.92e-01 96.0% 98.2%
4tn5A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 59.0 5.70e-01 99.0% 92.0%
6ptzA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 49.0 4.54e-01 79.2% 76.9%
4u63A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 53.0 4.35e-01 85.1% 72.4%
6mh4A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 49.0 4.32e-01 78.2% 97.9%
3sg0A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 52.0 4.60e-01 87.1% 80.9%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 51.0 4.72e-01 83.2% 94.6%
3lftB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 59.0 5.14e-01 98.0% 78.2%
3a00A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 52.0 5.44e-01 98.0% 96.7%
5buqA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.63 52.0 3.52e-01 90.1% 29.7%
1vbkA03 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 50.0 4.61e-01 86.1% 93.2%
3q41B02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 56.0 4.64e-01 98.0% 88.6%
4fshA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.62 52.0 4.85e-01 93.1% 87.7%
2cb0A01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.62 52.0 4.52e-01 93.1% 76.6%
4c1uA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 52.0 4.27e-01 95.0% 70.3%
2zsgA01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.60 46.0 4.33e-01 84.2% 87.5%
3a1iA02 3.90.1300.10 Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain 0.59 51.0 3.36e-01 98.0% 89.6%
1z3iX01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.58 43.0 3.22e-01 79.2% 40.4%
2xvyA02 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 43.0 4.06e-01 78.2% 78.2%
3i3vB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 50.0 4.25e-01 98.0% 79.3%
5f7vA00 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 48.0 3.29e-01 95.0% 72.7%
3oo8A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 46.0 3.94e-01 91.1% 77.0%
4pe3A00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.55 48.0 3.48e-01 100.0% 71.1%
4ovqA00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.55 48.0 3.48e-01 100.0% 73.2%
4xeqB00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.54 46.0 3.40e-01 100.0% 72.4%
4p8bA00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.52 45.0 3.30e-01 100.0% 72.0%
3id6A01 3.30.420.220 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.51 40.0 3.95e-01 84.2% 84.0%
1vhcF00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 46.0 3.55e-01 97.0% 76.5%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3976871 2007.1.10.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › PrpR receptor domain-like › PrpR_N 0.85 81.0 5.57e-01 100.0% 63.1%
3948504 2007.1.2.11 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.79 71.0 6.26e-01 98.0% 85.5%
4927395 2007.1.2.5 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Bmp 0.79 60.0 5.53e-01 79.2% 69.6%
3588003 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.76 68.0 6.02e-01 98.0% 80.7%
3589726 2007.2.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like 0.75 64.0 6.55e-01 94.1% 96.8%
3508868 2007.1.10.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › PrpR receptor domain-like › PrpR_N 0.75 66.0 6.73e-01 100.0% 95.0%
3326851 2007.1.3.28 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_transf_61 0.74 68.0 5.07e-01 100.0% 69.2%
3807997 2007.2.1.8 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Glyco_transf_61 0.74 68.0 5.09e-01 100.0% 71.1%
3815881 2007.1.1.22 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Glyco_transf_61 0.73 67.0 5.15e-01 100.0% 77.2%
3349499 2007.2.1.8 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Glyco_transf_61 0.73 67.0 5.37e-01 100.0% 87.8%
3775044 7512.1.1.88 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_61 0.71 64.0 4.90e-01 100.0% 65.5%
3411651 7510.1.1.0 ↗ a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like 0.71 63.0 5.18e-01 97.0% 69.4%
4993464 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.71 60.0 4.76e-01 93.1% 99.0%
3185680 2007.2.1.8 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Glyco_transf_61 0.71 62.0 5.13e-01 96.0% 75.0%
3719472 2007.1.3.28 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_transf_61 0.71 61.0 6.09e-01 100.0% 91.4%
4046481 2007.1.3.28 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_transf_61 0.71 64.0 4.73e-01 100.0% 58.8%
3620878 7512.1.1.66 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Exostosin_GT47 0.71 64.0 5.04e-01 99.0% 63.4%
3710589 2007.1.3.28 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_transf_61 0.71 64.0 5.38e-01 100.0% 85.9%
4411724 2007.1.6.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N 0.71 53.0 5.34e-01 78.2% 99.0%
4157122 2007.2.2.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB 0.71 62.0 6.13e-01 97.0% 96.3%
4004161 2007.1.16.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn 0.71 56.0 5.13e-01 90.1% 65.4%
5061260 2007.1.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.70 59.0 4.84e-01 92.1% 99.5%
5058856 7597.1.1.0 ↗ a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.70 56.0 5.58e-01 92.1% 82.9%
3883512 2007.9.1.5 ↗ a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_3 0.70 63.0 5.67e-01 100.0% 94.3%
1891978 2007.2.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.69 60.0 5.26e-01 96.0% 97.4%
5043545 7597.1.1.0 ↗ a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.69 57.0 5.85e-01 89.1% 98.9%
4956161 2007.1.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.69 61.0 4.55e-01 99.0% 93.7%
5021191 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.69 52.0 4.67e-01 80.2% 90.7%
4361090 2007.1.3.16 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › KaiA_N 0.69 61.0 5.34e-01 100.0% 78.1%
4105416 2007.1.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.67 60.0 4.41e-01 99.0% 94.4%
5044386 2006.1.2.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.67 54.0 4.14e-01 86.1% 55.2%
4957366 2007.2.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.67 59.0 4.78e-01 98.0% 80.0%
1087540 2007.1.3.9 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › TadZ_N 0.67 60.0 5.61e-01 100.0% 94.5%
2140309 7523.1.1.25 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Phosphonate-bd 0.67 50.0 5.07e-01 80.2% 79.2%
3838052 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.67 60.0 5.64e-01 100.0% 94.4%
3945878 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.66 59.0 4.76e-01 100.0% 78.5%
3969342 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.66 58.0 4.69e-01 98.0% 81.5%
3499873 2004.1.1.192 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 0.66 59.0 4.75e-01 100.0% 94.0%
3182714 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.66 57.0 5.14e-01 98.0% 91.7%
4950706 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.66 49.0 4.56e-01 79.2% 96.2%
3807086 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.66 58.0 4.48e-01 98.0% 72.9%
4947723 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.66 54.0 3.93e-01 90.1% 53.7%
1758826 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.65 52.0 5.34e-01 87.1% 95.9%
3479767 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 59.0 4.47e-01 100.0% 93.8%
5025735 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.65 52.0 4.10e-01 86.1% 75.7%
4267207 2007.1.2.13 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 0.63 56.0 4.75e-01 98.0% 84.8%
384421 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.63 48.0 4.44e-01 83.2% 90.2%
3609532 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.62 52.0 5.30e-01 99.0% 93.0%
3839140 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.62 54.0 4.48e-01 96.0% 85.0%
4229969 2007.1.6.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N 0.62 51.0 5.18e-01 99.0% 90.0%
3841808 2007.1.6.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain 0.62 46.0 4.50e-01 79.2% 79.1%
3973763 2007.1.2.8 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ABC_sub_bind 0.61 54.0 4.75e-01 98.0% 78.7%
4121473 2488.1.1.5 ↗ a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase 0.59 50.0 4.62e-01 96.0% 96.3%
2754025 7523.1.1.8 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 0.59 44.0 4.29e-01 80.2% 97.3%
3987384 2007.1.6.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N 0.58 48.0 4.88e-01 98.0% 93.0%
4973801 7523.1.1.22 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3 0.56 43.0 4.00e-01 84.2% 75.6%
3588576 7523.1.1.59 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DUF3502, SBP_bac_8 0.54 46.0 3.00e-01 95.0% 64.8%
3595305 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 47.0 2.92e-01 97.0% 27.5%
4161871 7516.1.1.10 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CofC 0.50 43.0 3.48e-01 98.0% 63.3%
D2 high residues 201-302
PDB
Domain cluster: rep: CAKLQF020000002.1__CAH1073768.1__SAMEA5780031_00655__00283__D403-506
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00989.32 best PAS 26.6 7.20e-06 94.1% 69.0%
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3oloA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.92 81.0 7.83e-01 92.2% 93.7%
4hh2C04 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.90 80.0 7.63e-01 93.1% 94.9%
3bwlB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.90 79.0 7.38e-01 92.2% 87.8%
2jheA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.90 85.0 8.33e-01 99.0% 96.3%
3b33A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.88 77.0 7.54e-01 92.2% 99.1%
3lyxB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.87 80.0 7.50e-01 96.1% 95.0%
5svgC00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.87 71.0 6.68e-01 85.3% 95.9%
2gj3A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.87 78.0 7.32e-01 94.1% 95.0%
7a6pB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.87 81.0 7.21e-01 99.0% 88.4%
2r78C00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.86 76.0 7.23e-01 92.2% 91.4%
3ewkA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.86 70.0 6.86e-01 84.3% 100.0%
1f98A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.86 75.0 6.95e-01 92.2% 86.4%
2b02A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.86 68.0 6.82e-01 83.3% 100.0%
4i5sA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.86 71.0 7.23e-01 86.3% 100.0%
3mjqA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.86 75.0 7.37e-01 92.2% 100.0%
4f3lA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.85 71.0 6.65e-01 87.3% 87.7%
3a0rA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.85 75.0 7.44e-01 93.1% 99.1%
4hh2B03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.85 70.0 7.13e-01 86.3% 100.0%
1d06A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.85 75.0 6.84e-01 93.1% 88.5%
3ewkA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.85 69.0 6.97e-01 85.3% 100.0%
1s67L00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.85 74.0 7.04e-01 93.1% 96.6%
3rtyB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.85 68.0 6.70e-01 84.3% 99.1%
4dj3B02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.85 69.0 5.90e-01 85.3% 70.8%
5iu1B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.84 70.0 6.78e-01 87.3% 94.6%
5xgbA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.84 77.0 7.29e-01 98.0% 96.6%
3fc7A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.84 68.0 6.92e-01 85.3% 98.0%
5hwtB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.84 71.0 6.63e-01 89.2% 92.6%
3mfxB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.84 73.0 7.03e-01 92.2% 94.7%
4hiaA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.83 78.0 6.38e-01 100.0% 71.0%
3mqqB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.83 78.0 7.35e-01 100.0% 99.2%
4m4xA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.82 71.0 6.60e-01 92.2% 98.4%
2pd8B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.82 71.0 6.26e-01 90.2% 99.3%
3eehA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.82 66.0 6.34e-01 85.3% 91.4%
3k3dA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.82 74.0 6.86e-01 97.1% 88.9%
2v0uA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.81 74.0 6.44e-01 97.1% 81.5%
3volA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.80 73.0 6.47e-01 96.1% 84.8%
4f3lA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.80 67.0 6.31e-01 88.2% 100.0%
4mn5A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.80 69.0 6.93e-01 91.2% 92.2%
2vlgC00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.80 66.0 6.67e-01 88.2% 100.0%
3h9wA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.79 66.0 6.46e-01 88.2% 100.0%
3mxqC00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.79 69.0 6.37e-01 92.2% 87.2%
2ykfA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.79 72.0 6.27e-01 97.1% 98.6%
3by8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.77 67.0 6.09e-01 99.0% 70.7%
1p0zA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.76 66.0 6.00e-01 100.0% 71.0%
4lrzE02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.76 61.0 6.38e-01 85.3% 100.0%
3fg8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.76 68.0 6.69e-01 95.1% 96.2%
2zbbA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.76 58.0 6.45e-01 82.4% 100.0%
6hmjA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.75 62.0 6.21e-01 88.2% 100.0%
4ehoA04 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.74 68.0 6.36e-01 99.0% 92.7%
6zj8D01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.74 69.0 6.64e-01 100.0% 93.0%
3lifA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.73 60.0 6.36e-01 91.2% 97.8%
4ew7A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.73 65.0 6.30e-01 95.1% 93.8%
2qkpD00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.72 66.0 6.03e-01 100.0% 86.6%
3luqB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.72 63.0 6.10e-01 95.1% 97.4%
3caxA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.71 64.0 5.80e-01 100.0% 79.7%
4ywzB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.70 64.0 5.68e-01 100.0% 71.9%
3li9A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.69 62.0 5.79e-01 99.0% 79.8%
2xrnA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.69 62.0 5.14e-01 98.0% 78.5%
4jgpA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.68 59.0 6.00e-01 91.2% 94.9%
7prrB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.65 56.0 4.72e-01 93.1% 78.1%
4jf6A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 51.0 3.96e-01 99.0% 92.5%
2xstA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 43.0 3.87e-01 79.4% 62.4%
3vskA03 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.57 49.0 3.48e-01 99.0% 93.6%
4bf3A00 2.30.31.50 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F 0.56 39.0 3.61e-01 73.5% 77.4%
4mnrA02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 48.0 3.47e-01 98.0% 93.0%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.55 32.0 3.54e-01 88.2% 69.9%
6nhsA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 48.0 3.69e-01 98.0% 92.9%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.54 47.0 4.20e-01 96.1% 99.3%
6hjfA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.54 38.0 3.17e-01 72.5% 79.5%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 41.0 3.69e-01 81.4% 69.7%
1k38A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 46.0 3.55e-01 97.1% 90.4%
2j7vB01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 47.0 3.49e-01 99.0% 90.1%
7cu8E01 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.53 43.0 3.64e-01 91.2% 87.4%
3wjcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 44.0 3.96e-01 97.1% 82.4%
2wuqB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 46.0 3.38e-01 100.0% 91.5%
1kyfA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.52 36.0 3.58e-01 85.3% 67.3%
6v04A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 40.0 3.78e-01 85.3% 80.3%
3v39A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 42.0 3.25e-01 92.2% 83.3%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4944871 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.92 80.0 7.53e-01 91.2% 89.2%
4930366 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.91 81.0 7.76e-01 93.1% 98.3%
4950593 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.91 80.0 7.18e-01 92.2% 81.5%
3462794 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.91 86.0 7.15e-01 100.0% 72.1%
4986761 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.91 84.0 7.52e-01 97.1% 85.9%
5047587 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.91 81.0 7.45e-01 93.1% 89.6%
4951931 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.90 83.0 7.92e-01 96.1% 96.5%
3986460 223.1.1.24 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 0.90 86.0 8.03e-01 100.0% 94.2%
5053088 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.90 79.0 7.72e-01 92.2% 100.0%
166739 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.90 79.0 7.31e-01 92.2% 87.2%
4142766 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.90 79.0 7.13e-01 91.2% 85.4%
5048056 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.90 83.0 7.67e-01 97.1% 91.2%
3972571 223.1.1.111 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS, PAS_9 0.90 82.0 5.81e-01 96.1% 46.7%
4951548 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.90 83.0 5.79e-01 97.1% 41.4%
5045470 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.89 82.0 7.57e-01 96.1% 91.2%
4962860 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.89 80.0 7.54e-01 94.1% 100.0%
5045728 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.89 82.0 7.42e-01 96.1% 86.9%
4946454 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.89 80.0 7.50e-01 94.1% 90.8%
5018463 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.89 82.0 7.60e-01 97.1% 90.4%
5003154 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.89 82.0 7.54e-01 96.1% 93.6%
5018633 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.89 82.0 7.19e-01 96.1% 81.4%
3942222 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.89 84.0 8.04e-01 100.0% 98.3%
5044924 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.89 79.0 7.67e-01 93.1% 96.4%
4987524 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.89 81.0 6.97e-01 96.1% 78.0%
5075481 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.89 83.0 6.11e-01 99.0% 95.8%
4968254 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.89 82.0 7.70e-01 97.1% 95.8%
5034774 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.89 82.0 7.56e-01 97.1% 89.6%
4949125 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.89 82.0 7.03e-01 97.1% 76.7%
5046670 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.88 82.0 6.39e-01 97.1% 59.5%
5048718 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.88 82.0 5.24e-01 97.1% 28.0%
4949934 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.88 81.0 6.63e-01 96.1% 67.6%
4988842 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.88 81.0 7.45e-01 96.1% 94.4%
3967163 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.88 81.0 7.33e-01 96.1% 88.5%
3967822 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.88 78.0 7.57e-01 92.2% 100.0%
4938888 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.88 81.0 7.64e-01 97.1% 94.2%
3968855 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.88 84.0 7.61e-01 100.0% 93.1%
4980668 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.88 84.0 5.77e-01 100.0% 41.0%
5062841 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.88 83.0 7.40e-01 99.0% 88.1%
166133 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.88 77.0 7.54e-01 92.2% 99.1%
4959633 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.88 83.0 5.99e-01 100.0% 46.7%
4959275 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.88 80.0 6.39e-01 96.1% 61.1%
4960917 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.88 78.0 5.62e-01 93.1% 43.5%
5021460 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.88 81.0 7.50e-01 97.1% 91.2%
3967508 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.88 82.0 7.90e-01 100.0% 97.4%
5033309 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.88 81.0 7.34e-01 97.1% 88.5%
5002348 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.88 83.0 5.77e-01 99.0% 41.8%
5052455 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.88 80.0 7.36e-01 96.1% 92.8%
4950288 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.88 77.0 7.36e-01 92.2% 93.9%
4932135 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.87 77.0 7.27e-01 93.1% 95.8%
5006515 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.87 78.0 7.45e-01 94.1% 99.1%
5052073 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.87 82.0 5.59e-01 99.0% 38.1%
4999616 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.87 82.0 5.30e-01 99.0% 29.9%
3969159 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.87 82.0 6.58e-01 100.0% 63.8%
4988945 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.87 80.0 6.53e-01 97.1% 68.0%
4960111 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.87 79.0 7.23e-01 96.1% 87.7%
3195333 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.87 78.0 6.98e-01 94.1% 91.9%
3064449 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.87 76.0 7.44e-01 92.2% 97.3%
4962862 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.87 81.0 7.51e-01 99.0% 95.2%
4987990 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.87 81.0 6.69e-01 99.0% 71.2%
3967408 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.87 82.0 7.48e-01 100.0% 93.8%
4205711 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.87 82.0 6.99e-01 100.0% 78.1%
5034545 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.87 81.0 7.27e-01 99.0% 86.7%
4930507 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.87 81.0 7.48e-01 99.0% 92.8%
5080323 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.87 81.0 6.98e-01 99.0% 80.7%
5044909 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.86 81.0 7.14e-01 99.0% 85.0%
4944528 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.86 81.0 7.23e-01 99.0% 90.4%
4524081 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.86 81.0 7.13e-01 99.0% 83.6%
4957163 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.86 80.0 7.23e-01 100.0% 90.4%
4484790 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.86 79.0 7.30e-01 97.1% 82.4%
4959467 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.86 80.0 6.90e-01 100.0% 77.8%
4962837 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.86 81.0 7.86e-01 99.0% 94.5%
3401903 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.86 81.0 7.86e-01 99.0% 99.1%
4950839 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.86 80.0 5.62e-01 99.0% 42.1%
5020715 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.85 80.0 7.70e-01 100.0% 96.5%
4422373 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.85 79.0 7.22e-01 99.0% 84.6%
4989092 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.85 79.0 7.88e-01 98.0% 95.2%
5004039 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.85 74.0 6.86e-01 92.2% 90.4%
3588721 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.85 78.0 7.46e-01 97.1% 94.8%
5075672 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.85 80.0 5.92e-01 100.0% 48.1%
5004858 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.85 79.0 6.79e-01 99.0% 80.7%
5061583 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.84 79.0 7.10e-01 99.0% 88.9%
5047355 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.84 74.0 7.13e-01 93.1% 96.5%
5038846 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.84 80.0 7.00e-01 99.0% 78.6%
3968543 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.84 78.0 6.72e-01 99.0% 79.3%
4091463 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.84 79.0 7.58e-01 100.0% 93.9%
4983714 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.84 73.0 7.25e-01 91.2% 98.1%
4980684 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.84 79.0 4.95e-01 100.0% 74.8%
3963339 223.1.1.24 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 0.84 77.0 7.29e-01 99.0% 97.5%
4964846 223.1.1.24 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 0.83 78.0 7.08e-01 99.0% 85.4%
3596677 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.83 73.0 7.54e-01 92.2% 100.0%
4989528 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.83 76.0 7.26e-01 97.1% 89.6%
4008723 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.83 77.0 7.08e-01 100.0% 90.8%
5050352 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.83 73.0 6.76e-01 94.1% 89.6%
5019574 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.82 76.0 7.31e-01 100.0% 95.7%
4963695 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.82 76.0 7.43e-01 99.0% 92.7%
4952182 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.81 74.0 7.19e-01 97.1% 100.0%
3714670 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.81 76.0 7.52e-01 100.0% 100.0%
4965148 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.77 71.0 7.04e-01 99.0% 96.2%
4946841 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.76 70.0 6.65e-01 100.0% 96.7%
4008731 223.1.1.24 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 0.75 64.0 6.79e-01 90.2% 100.0%
D3 high residues 336-493
PDB
Domain cluster: rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
Pfam (4)
AccessionNameScoreE-valueQ covHMM cov
PF14532.13 best Sigma54_activ_2 52.7 8.00e-14 100.0% 88.4%
PF00158.33 Sigma54_activat 228.6 5.00e-68 97.5% 89.9%
PF07728.21 AAA_5 28.8 1.50e-06 88.6% 87.8%
PF00004.36 AAA 27.4 5.50e-06 88.0% 84.0%
D4 high residues 494-568
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25601.2 best AAA_lid_14 63.0 2.60e-17 98.7% 85.1%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ep0A03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.73 62.0 6.43e-01 90.7% 98.6%
2v6zM00 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.68 59.0 5.92e-01 96.0% 100.0%
3if8B02 1.20.58.730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 50.0 4.57e-01 88.0% 80.0%
2hdoA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 36.0 3.81e-01 70.7% 67.2%
2ja2A04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.58 39.0 4.33e-01 72.0% 100.0%
2dzlA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.55 34.0 3.61e-01 76.0% 71.2%
3mhsB00 1.10.246.140 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › ENY2/SUS1 0.53 35.0 3.30e-01 100.0% 56.0%
3d8lA00 1.10.8.940 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein, phage p2 ORF12 0.51 44.0 4.14e-01 98.7% 80.2%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944882 148.1.3.172 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_14 0.77 70.0 6.69e-01 100.0% 85.9%
4542092 148.1.3.172 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_14 0.76 66.0 6.89e-01 93.3% 98.6%
4589579 148.1.3.172 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_14 0.75 63.0 6.33e-01 98.7% 88.0%
3972496 148.1.3.172 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_14 0.75 70.0 6.82e-01 100.0% 92.5%
3969407 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.73 67.0 6.44e-01 100.0% 87.1%
3946952 148.1.3.172 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_14 0.73 67.0 5.93e-01 100.0% 71.4%
4060907 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.72 64.0 6.30e-01 98.7% 97.5%
3942220 148.1.3.172 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_14 0.71 65.0 6.56e-01 100.0% 98.7%
3924344 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.69 60.0 5.96e-01 97.3% 95.0%
3411600 143.2.1.1 ↗ alpha arrays › PABP domain-like › Ribosomal protein L20 › Ribosomal protein L20 › Ribosomal_L20 0.62 47.0 3.92e-01 80.0% 51.5%
3646336 143.2.1.1 ↗ alpha arrays › PABP domain-like › Ribosomal protein L20 › Ribosomal protein L20 › Ribosomal_L20 0.61 45.0 4.95e-01 81.3% 100.0%
3510564 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.59 47.0 4.25e-01 86.7% 76.7%
3308724 3721.1.1.2 ↗ alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › MAP65_ASE1 0.57 41.0 3.89e-01 76.0% 73.3%
3591437 601.29.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › TM1646-like › TM1646-like 0.56 38.0 3.49e-01 70.7% 60.0%
3618000 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 37.0 3.65e-01 70.7% 68.2%
3341256 109.3.1.137 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF3490 0.54 36.0 3.91e-01 70.7% 88.3%
3431012 101.1.10.7 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.54 43.0 4.01e-01 93.3% 97.0%
D5 high residues 581-626
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02954.26 best HTH_8 44.1 2.00e-11 80.4% 83.3%
CATH (93)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.92 84.0 7.18e-01 100.0% 65.7%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.92 78.0 7.77e-01 91.3% 89.4%
1etkA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.91 83.0 6.96e-01 100.0% 61.3%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 74.0 6.21e-01 89.1% 55.6%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 68.0 5.49e-01 84.8% 44.7%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 72.0 6.15e-01 89.1% 63.9%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 75.0 5.87e-01 93.5% 47.2%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 67.0 6.31e-01 84.8% 67.9%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 73.0 5.81e-01 95.7% 47.7%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.87 70.0 4.45e-01 89.1% 19.4%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 66.0 6.04e-01 82.6% 63.8%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 69.0 5.79e-01 89.1% 53.3%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.86 73.0 5.14e-01 93.5% 32.8%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 66.0 6.00e-01 89.1% 63.5%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 64.0 6.82e-01 82.6% 100.0%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 69.0 5.70e-01 93.5% 52.5%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.82 71.0 6.29e-01 100.0% 69.1%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 66.0 5.93e-01 89.1% 64.1%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 66.0 5.46e-01 89.1% 52.5%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 65.0 5.96e-01 89.1% 67.2%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 62.0 6.04e-01 82.6% 78.0%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 68.0 6.01e-01 95.7% 64.2%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 6.24e-01 91.3% 77.8%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 64.0 5.70e-01 89.1% 64.6%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 69.0 6.39e-01 100.0% 81.7%
4jykA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 69.0 6.40e-01 97.8% 98.3%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 5.95e-01 95.7% 68.3%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.78 61.0 4.88e-01 89.1% 42.3%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 5.65e-01 95.7% 63.9%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 4.86e-01 100.0% 37.9%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 5.86e-01 97.8% 69.8%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 6.07e-01 95.7% 86.0%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 58.0 5.58e-01 89.1% 72.2%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 62.0 5.07e-01 91.3% 49.4%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 5.11e-01 95.7% 53.9%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 5.93e-01 95.7% 79.6%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.75 62.0 4.41e-01 95.7% 30.5%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 5.38e-01 93.5% 59.7%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 5.62e-01 93.5% 70.0%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 4.77e-01 100.0% 45.2%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 61.0 5.80e-01 100.0% 78.6%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 4.55e-01 100.0% 37.0%
1xd7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 4.51e-01 97.8% 37.1%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 5.50e-01 100.0% 70.1%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 4.42e-01 100.0% 33.8%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 5.46e-01 91.3% 78.8%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 62.0 5.73e-01 100.0% 78.7%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 56.0 5.45e-01 91.3% 78.4%
2cmpA00 1.10.10.1400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Terminase, small subunit, N-terminal DNA-binding domain, HTH motif 0.72 58.0 5.57e-01 95.7% 85.7%
6s6hA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.72 56.0 4.41e-01 93.5% 39.4%
1u2wD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 4.74e-01 95.7% 47.9%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 55.0 5.61e-01 97.8% 91.1%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.71 60.0 4.51e-01 100.0% 36.5%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 57.0 5.25e-01 97.8% 67.7%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 4.46e-01 100.0% 39.5%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 60.0 5.75e-01 97.8% 92.7%
2auwB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 55.0 4.82e-01 93.5% 57.1%
4fx0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 4.40e-01 100.0% 36.9%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.70 60.0 3.91e-01 97.8% 24.4%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 50.0 4.10e-01 76.1% 44.4%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 54.0 5.57e-01 91.3% 100.0%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 4.73e-01 97.8% 52.4%
2de2A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.69 50.0 3.27e-01 78.3% 69.1%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.69 57.0 3.66e-01 100.0% 23.0%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 4.79e-01 97.8% 58.0%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 58.0 4.65e-01 97.8% 52.1%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 49.0 4.38e-01 82.6% 54.5%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 49.0 4.05e-01 82.6% 43.9%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 4.57e-01 91.3% 66.3%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 53.0 5.37e-01 91.3% 93.2%
2avuB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.67 57.0 4.45e-01 100.0% 43.3%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 52.0 4.37e-01 89.1% 51.2%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 56.0 4.42e-01 100.0% 89.3%
5hxgB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.66 56.0 5.07e-01 100.0% 69.2%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 56.0 4.73e-01 97.8% 69.6%
1x57A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 48.0 3.92e-01 82.6% 40.7%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 54.0 4.60e-01 89.1% 57.7%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 50.0 4.56e-01 84.8% 63.5%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 50.0 4.34e-01 97.8% 51.8%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 52.0 4.64e-01 89.1% 98.5%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 48.0 3.77e-01 87.0% 36.9%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.64 53.0 4.24e-01 100.0% 51.5%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 45.0 4.18e-01 84.8% 60.0%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.62 44.0 4.46e-01 89.1% 78.3%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 49.0 4.01e-01 89.1% 100.0%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 50.0 4.16e-01 95.7% 52.9%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 46.0 4.11e-01 95.7% 55.3%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 49.0 4.48e-01 97.8% 67.2%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 44.0 4.04e-01 95.7% 58.8%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 48.0 4.85e-01 89.1% 97.8%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 44.0 4.00e-01 95.7% 56.8%
3vuqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 50.0 3.45e-01 100.0% 40.9%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 44.0 3.87e-01 84.8% 55.3%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944389 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.97 87.0 6.79e-01 97.8% 50.6%
4342882 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.97 92.0 8.22e-01 100.0% 76.7%
4009103 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.97 91.0 8.20e-01 100.0% 76.7%
3973850 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.97 84.0 6.35e-01 95.7% 44.2%
4142399 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.97 82.0 6.29e-01 89.1% 45.6%
3971281 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.97 90.0 8.41e-01 100.0% 83.6%
3980686 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.96 90.0 8.72e-01 100.0% 92.0%
3982095 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.96 83.0 6.24e-01 95.7% 42.9%
4204226 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.96 89.0 8.99e-01 97.8% 100.0%
4133358 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.96 87.0 5.75e-01 95.7% 28.4%
4359947 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.96 90.0 7.82e-01 100.0% 70.8%
3980517 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.96 89.0 8.05e-01 100.0% 76.7%
3984540 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.96 87.0 8.06e-01 95.7% 80.0%
4590594 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.96 78.0 8.34e-01 87.0% 100.0%
4612964 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.96 84.0 8.49e-01 93.5% 95.6%
3282047 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.96 88.0 6.56e-01 97.8% 45.0%
3976869 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.96 82.0 7.40e-01 91.3% 70.0%
4178355 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.95 86.0 6.40e-01 95.7% 44.0%
4603528 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.95 88.0 7.31e-01 100.0% 61.3%
4010289 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.95 65.0 7.50e-01 71.7% 100.0%
4456382 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.94 88.0 6.82e-01 100.0% 51.1%
3968355 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.94 87.0 8.13e-01 100.0% 83.6%
4182256 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.94 87.0 6.57e-01 100.0% 46.0%
None — 0.94 87.0 6.78e-01 100.0% 51.7%
3969664 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.94 86.0 7.45e-01 100.0% 67.6%
None — 0.94 82.0 7.02e-01 93.5% 63.2%
3289886 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.94 80.0 5.93e-01 95.7% 40.0%
3946248 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.94 84.0 6.28e-01 100.0% 44.0%
3283604 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.93 81.0 6.12e-01 97.8% 43.0%
3586944 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.93 82.0 6.44e-01 95.7% 48.9%
4603338 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.93 77.0 6.60e-01 89.1% 58.6%
4554905 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.93 86.0 7.76e-01 100.0% 80.0%
4659432 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.93 86.0 7.13e-01 100.0% 64.0%
3974476 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.93 85.0 7.97e-01 100.0% 83.6%
3288236 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.93 79.0 6.18e-01 95.7% 46.7%
4282037 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.93 82.0 6.42e-01 95.7% 48.9%
3968335 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.93 85.0 7.72e-01 100.0% 78.3%
152212 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.93 85.0 7.36e-01 100.0% 69.1%
4169757 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.93 81.0 7.07e-01 93.5% 66.2%
3280686 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.93 84.0 6.31e-01 97.8% 45.0%
3289370 101.1.1.300 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.93 81.0 6.08e-01 97.8% 43.0%
4333531 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.92 85.0 8.23e-01 100.0% 96.0%
4480726 101.1.1.300 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.92 80.0 7.80e-01 93.5% 86.0%
3964673 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.92 84.0 6.52e-01 100.0% 48.9%
4642479 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.92 81.0 6.25e-01 95.7% 46.3%
1095020 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.92 84.0 7.18e-01 100.0% 65.7%
3954318 101.1.1.300 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.92 76.0 5.95e-01 89.1% 45.6%
3987666 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.92 79.0 6.23e-01 95.7% 49.4%
1212232 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.92 78.0 7.77e-01 91.3% 89.4%
3949224 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.91 85.0 7.21e-01 100.0% 71.4%
3970408 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.91 83.0 7.54e-01 100.0% 78.3%
4596898 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.91 74.0 6.03e-01 87.0% 50.0%
3986709 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.91 82.0 7.50e-01 100.0% 76.7%
4471030 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.91 82.0 7.06e-01 100.0% 67.1%
3286796 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.91 81.0 6.19e-01 100.0% 46.3%
4007629 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.91 82.0 7.05e-01 100.0% 65.7%
4342758 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.91 73.0 6.87e-01 87.0% 72.7%
4501735 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.91 83.0 6.93e-01 100.0% 61.3%
3290021 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.90 79.0 5.85e-01 93.5% 41.0%
4132433 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.90 82.0 7.16e-01 100.0% 69.2%
3964388 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.90 81.0 7.21e-01 100.0% 73.4%
3280373 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.90 76.0 5.85e-01 95.7% 44.2%
3286340 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.90 82.0 6.30e-01 97.8% 48.4%
4043241 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 73.0 6.00e-01 89.1% 51.2%
3969080 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.89 81.0 7.60e-01 100.0% 83.6%
3955106 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.89 77.0 6.08e-01 95.7% 50.0%
3590198 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.89 74.0 5.76e-01 93.5% 45.6%
3240446 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 76.0 7.15e-01 95.7% 78.2%
3961692 101.1.1.300 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.88 76.0 5.91e-01 95.7% 46.3%
5002651 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.88 79.0 6.16e-01 100.0% 48.4%
3795916 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.87 73.0 7.37e-01 95.7% 93.3%
4414382 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.86 78.0 6.15e-01 95.7% 51.8%
3280215 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.86 77.0 5.96e-01 97.8% 47.4%
4560931 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.85 66.0 5.60e-01 87.0% 52.0%
3959391 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.85 71.0 6.22e-01 95.7% 62.9%
4980021 101.1.3.33 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 0.85 71.0 6.09e-01 93.5% 60.0%
3939238 101.1.1.52 ↗ alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.83 67.0 5.34e-01 91.3% 45.6%
3579797 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.82 67.0 5.60e-01 97.8% 52.5%
5040558 101.1.2.162 ↗ alpha arrays › HTH › HTH › winged helix domain › DprA_WH 0.82 64.0 5.46e-01 91.3% 53.3%
3636947 101.1.3.9 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Myb_DNA-bind_8 0.81 68.0 6.67e-01 93.5% 90.0%
3930711 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 64.0 6.46e-01 91.3% 91.1%
3285795 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 62.0 5.88e-01 84.8% 81.8%
3873677 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.79 63.0 5.50e-01 91.3% 58.6%
3767621 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.78 64.0 5.35e-01 91.3% 52.5%
3401087 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.78 62.0 6.11e-01 91.3% 82.0%
3404418 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.76 60.0 5.31e-01 91.3% 58.6%
4162857 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.76 62.0 6.06e-01 97.8% 84.0%
3587618 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 60.0 5.06e-01 95.7% 51.8%
5057140 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 56.0 5.23e-01 89.1% 66.7%
1822676 101.1.1.3 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.69 57.0 5.52e-01 100.0% 85.5%
4008959 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 54.0 5.17e-01 89.1% 74.5%
4970998 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.68 57.0 4.56e-01 97.8% 48.0%
3997733 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 58.0 5.22e-01 100.0% 78.5%
5051680 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.67 59.0 4.87e-01 97.8% 57.5%
3588243 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.65 52.0 4.86e-01 97.8% 71.7%
5013438 101.1.2.881 ↗ alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.64 56.0 5.14e-01 100.0% 88.3%
4938759 101.1.8.14 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 0.64 56.0 5.31e-01 100.0% 87.3%
4031703 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.57 42.0 3.89e-01 93.5% 60.0%
D6 medium residues 112-165
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06506.17 best PrpR_N 32.3 1.10e-07 100.0% 29.9%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pjuA02 3.40.50.10660 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PrpR receptor domain-like 0.87 81.0 6.70e-01 100.0% 62.5%
1ashA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.71 60.0 4.45e-01 98.1% 93.2%
2l82A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 56.0 4.14e-01 100.0% 53.7%
3m1aJ00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 56.0 3.64e-01 100.0% 31.5%
3lupA01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.64 57.0 4.08e-01 100.0% 61.9%
2p9bA03 3.40.50.10910 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Amidohydrolase 0.59 52.0 4.02e-01 100.0% 51.6%
1exzB00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.59 43.0 3.21e-01 77.8% 72.9%
2zooA02 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.59 40.0 3.08e-01 70.4% 78.7%
1uzcA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.57 49.0 4.57e-01 98.1% 87.0%
2vm6A00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.57 48.0 3.59e-01 98.1% 55.6%
1ctnA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.57 45.0 2.86e-01 98.1% 58.6%
7lxuE01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 47.0 3.18e-01 98.1% 75.7%
1go3F02 6.10.140.10 Special › Helix non-globular › Helix Hairpins › 0.53 38.0 4.03e-01 92.6% 89.4%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2050733 2007.1.10.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › PrpR receptor domain-like › PrpR_N 0.91 84.0 6.78e-01 100.0% 56.7%
4948173 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.72 62.0 3.71e-01 100.0% 92.3%
4948675 3930.1.1.3 ↗ alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical 0.67 59.0 4.32e-01 98.1% 62.9%
4979567 3930.1.1.0 ↗ alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase 0.66 57.0 4.28e-01 98.1% 67.4%
3627903 5.1.11.23 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_HPS5 0.55 44.0 2.58e-01 90.7% 94.5%
3435472 376.1.4.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog 0.54 37.0 3.51e-01 98.1% 60.0%
3296868 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.51 42.0 3.99e-01 90.7% 81.5%
5029631 102.1.1.11 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 0.51 35.0 2.84e-01 98.1% 35.5%