Back to structures

CAKLQF020000008.1__CAH1081952.1__SAMEA5780031_01847__00092

Bact-Vir

CAKLQF020000008.1__CAH1081952.1__SAMEA5780031_01847__00092

Identity

Kingdom:
phage

Quality

93.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 283-414_474-544
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00117.35 best GATase 129.1 2.30e-37 87.2% 99.0%
D2 medium residues 1-173_264-282
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06418.21 best CTP_synth_N 286.2 3.30e-85 94.8% 65.7%
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nvaA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.96 94.0 7.91e-01 100.0% 97.9%
1pjqA04 3.40.1010.10 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain 0.70 41.0 5.19e-01 90.1% 96.5%
3dnfB01 3.40.1010.20 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.68 37.0 4.96e-01 87.5% 100.0%
3cioA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 48.0 4.30e-01 90.1% 54.9%
3nutC01 3.40.1010.10 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain 0.66 39.0 4.89e-01 90.1% 97.4%
3hh1A00 3.40.1010.10 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain 0.65 39.0 4.86e-01 90.1% 99.1%
1knqA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 37.0 3.89e-01 90.1% 61.4%
3qxcA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 55.0 5.23e-01 91.7% 99.1%
1ofuX00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 38.0 4.71e-01 89.6% 98.3%
2orwB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 40.0 4.81e-01 90.1% 99.2%
3ihlB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 54.0 5.05e-01 91.7% 100.0%
2b8tA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 42.0 4.89e-01 90.1% 99.3%
1yksA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 41.0 4.24e-01 89.6% 73.3%
3zm6A03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.60 42.0 4.73e-01 84.4% 92.1%
1byiA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 55.0 5.23e-01 97.4% 96.0%
7zveA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 42.0 4.29e-01 90.1% 73.7%
3b85A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 44.0 4.47e-01 89.6% 79.7%
3of5B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 54.0 5.16e-01 97.9% 94.5%
2no4A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.57 24.0 3.61e-01 75.5% 94.7%
5xb6A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 38.0 3.71e-01 79.2% 60.5%
4a0gD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 53.0 4.69e-01 100.0% 93.7%
3fgnD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 52.0 4.95e-01 98.4% 93.8%
1jqlB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 36.0 4.05e-01 89.1% 86.4%
2vl7A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 47.0 4.89e-01 90.1% 100.0%
2xitA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 51.0 4.54e-01 100.0% 99.6%
1zu4A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 51.0 4.90e-01 97.9% 88.1%
5g0xA00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.55 45.0 3.67e-01 86.5% 90.0%
1pzxB01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.55 32.0 3.88e-01 80.7% 87.7%
2ozeA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 52.0 4.49e-01 100.0% 84.2%
6iubA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 51.0 4.57e-01 99.5% 93.6%
7w0bA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 41.0 4.04e-01 88.0% 71.0%
3ez2A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 51.0 4.40e-01 100.0% 92.1%
2px0A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 48.0 4.93e-01 97.4% 95.1%
4iqyB00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.55 42.0 4.05e-01 89.1% 69.9%
2cx6A00 3.30.370.10 Alpha Beta › 2-Layer Sandwich › Barnase; Chain D › Barstar-like 0.54 27.0 3.76e-01 72.4% 100.0%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 41.0 3.46e-01 79.2% 63.4%
6znpA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 41.0 4.03e-01 88.0% 71.7%
2r8rA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 43.0 4.16e-01 90.1% 75.6%
6fnuA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.53 40.0 3.46e-01 76.0% 98.3%
1ihuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 50.0 4.28e-01 99.0% 95.5%
2wojC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 50.0 4.32e-01 100.0% 95.1%
1j0aA01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 40.0 3.85e-01 79.2% 80.9%
3ijdA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.52 38.0 3.41e-01 75.5% 100.0%
1odfA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 41.0 3.67e-01 84.4% 92.1%
1wcv100 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 48.0 4.44e-01 100.0% 92.6%
1g3qA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 48.0 4.46e-01 99.5% 93.2%
8jx6B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 43.0 4.29e-01 90.1% 85.5%
4nl4H03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 41.0 4.12e-01 90.1% 82.1%
4ceiB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 4.50e-01 89.1% 99.4%
4oo3A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 38.0 4.24e-01 90.1% 100.0%
2b3yA02 3.40.1060.10 Alpha Beta › 3-Layer(aba) Sandwich › Aconitase; Domain 2 › Aconitase, Domain 2 0.51 33.0 3.87e-01 90.1% 95.3%
1sqsA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.51 38.0 3.62e-01 77.6% 77.9%
8dtpC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 46.0 4.15e-01 97.4% 93.3%
4dzzA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 46.0 4.55e-01 99.5% 90.8%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4103299 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.98 90.0 7.66e-01 93.2% 96.4%
3339713 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.98 96.0 7.97e-01 99.5% 98.0%
5035716 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.98 86.0 8.82e-01 90.1% 93.0%
4948214 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.97 95.0 7.94e-01 100.0% 100.0%
5028526 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.97 95.0 7.82e-01 100.0% 94.4%
3604894 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.97 95.0 7.73e-01 100.0% 92.4%
3514466 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.97 95.0 7.96e-01 100.0% 100.0%
3594528 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.95 92.0 7.74e-01 97.9% 99.3%
4928635 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.84 81.0 7.12e-01 99.0% 98.8%
4939161 2004.1.1.101 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MeaB 0.79 50.0 5.16e-01 90.1% 67.2%
4486379 2004.1.1.91 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LpxK 0.75 46.0 4.38e-01 90.1% 52.9%
4947321 2004.1.1.570 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF30762 0.73 46.0 4.57e-01 90.1% 59.5%
3960537 7550.1.1.0 a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain 0.69 39.0 5.04e-01 89.1% 100.0%
4961353 7550.1.1.1 a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase 0.67 40.0 4.95e-01 90.1% 95.0%
1937225 7550.1.1.1 a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase 0.66 39.0 4.90e-01 90.1% 98.2%
3975661 2004.1.1.208 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.66 37.0 3.92e-01 90.1% 60.6%
4392016 2004.1.1.60 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI 0.65 36.0 3.58e-01 90.1% 50.8%
3507985 7550.1.1.1 a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase 0.64 43.0 5.04e-01 90.1% 96.3%
4409668 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.62 55.0 4.99e-01 91.7% 98.0%
3956212 2004.1.1.67 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA 0.62 58.0 4.97e-01 99.0% 90.8%
4423010 2004.1.1.28 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.62 43.0 4.92e-01 90.1% 94.5%
5073559 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 57.0 5.02e-01 99.0% 94.2%
5046842 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 56.0 4.81e-01 95.8% 97.2%
4441779 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.61 57.0 5.46e-01 99.5% 98.6%
4125316 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.60 53.0 4.67e-01 93.2% 96.3%
4654622 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.60 54.0 5.25e-01 94.3% 97.1%
4229452 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.59 56.0 5.09e-01 99.0% 91.8%
4527075 2004.1.1.28 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.59 41.0 4.75e-01 90.1% 97.9%
4378077 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.59 55.0 5.17e-01 97.4% 94.2%
4581964 2004.1.1.28 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.58 42.0 4.46e-01 90.1% 82.9%
4548053 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.58 55.0 5.10e-01 99.5% 96.6%
4975517 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.58 51.0 5.22e-01 93.2% 95.1%
3945284 2004.1.1.206 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 0.58 53.0 4.56e-01 96.9% 100.0%
3453101 2004.1.1.85 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase 0.57 45.0 4.77e-01 84.9% 90.9%
3962393 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.57 54.0 5.07e-01 99.0% 93.8%
3500954 2005.1.1.36 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.57 42.0 4.50e-01 97.9% 89.0%
3291520 2004.1.1.67 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA 0.56 52.0 4.42e-01 100.0% 91.3%
4310418 2004.1.1.91 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LpxK 0.56 49.0 4.45e-01 92.2% 81.2%
4458581 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 50.0 4.01e-01 97.9% 51.7%
3066560 2004.1.1.53 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt 0.55 49.0 3.94e-01 94.3% 99.7%
4084160 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.55 52.0 4.99e-01 97.9% 94.9%
3740129 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 49.0 3.44e-01 94.8% 93.4%
4943561 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 52.0 4.66e-01 100.0% 95.0%
167257 2004.1.1.206 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 0.55 52.0 4.49e-01 100.0% 84.2%
4144300 2004.1.1.175 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.55 51.0 4.21e-01 100.0% 94.0%
3712975 2004.1.1.208 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.54 40.0 3.65e-01 90.1% 56.9%
3356079 2004.1.1.175 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.54 51.0 4.25e-01 100.0% 86.3%
4953969 2004.1.1.67 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA 0.54 51.0 4.57e-01 99.5% 83.1%
4066087 2004.1.1.91 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LpxK 0.54 48.0 4.50e-01 93.2% 82.5%
143810 2004.1.1.465 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MipZ, AAA_31 0.54 50.0 4.45e-01 100.0% 89.9%
5043251 2004.1.1.206 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 0.54 50.0 4.61e-01 99.0% 94.1%
4051245 2004.1.1.91 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LpxK 0.53 47.0 4.29e-01 91.7% 85.7%
4233745 2004.1.1.91 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LpxK 0.53 47.0 4.35e-01 92.2% 75.8%
4983810 2004.1.1.570 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF30762 0.53 48.0 3.98e-01 93.2% 63.9%
5026856 2004.1.1.206 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 0.53 50.0 4.52e-01 99.0% 93.6%
None 0.53 51.0 4.83e-01 100.0% 95.9%
3401420 2004.1.1.437 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA, AAA_31 0.53 50.0 4.51e-01 100.0% 92.9%
4990367 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.53 36.0 4.10e-01 91.7% 89.7%
4240946 2004.1.1.91 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LpxK 0.53 46.0 4.15e-01 91.7% 80.0%
4376324 2004.1.1.91 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LpxK 0.53 47.0 4.35e-01 92.7% 83.0%
4369666 2004.1.1.43 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRP54 0.53 49.0 4.73e-01 97.9% 88.6%
3398407 2004.1.1.437 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA, AAA_31 0.53 50.0 4.35e-01 100.0% 82.4%
4943475 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 48.0 4.65e-01 94.8% 92.4%
5004778 2004.1.1.206 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 0.53 49.0 4.56e-01 99.5% 92.5%
4278330 2004.1.1.437 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA, AAA_31 0.53 49.0 4.65e-01 99.5% 94.3%
None 0.53 49.0 4.29e-01 100.0% 91.2%
None 0.52 49.0 4.55e-01 99.0% 94.0%
4156481 2004.1.1.91 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LpxK 0.52 43.0 4.12e-01 99.5% 75.3%
4275419 2004.1.1.91 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LpxK 0.52 46.0 4.16e-01 91.7% 78.4%
5047420 2004.1.1.206 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 0.52 48.0 4.35e-01 99.0% 93.8%
4933764 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.52 43.0 4.63e-01 92.2% 99.4%
3723326 2004.1.1.94 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 0.52 49.0 4.06e-01 100.0% 98.1%
4105177 2004.1.1.91 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LpxK 0.52 46.0 4.33e-01 92.7% 83.1%
4385750 2004.1.1.67 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA 0.52 48.0 4.56e-01 100.0% 92.4%
4504969 2004.1.1.175 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.51 48.0 4.35e-01 99.5% 94.9%
3941193 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.51 42.0 4.19e-01 89.1% 84.6%
4966116 2004.1.1.210 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ERCC3_RAD25_C 0.51 43.0 4.34e-01 89.6% 93.7%
4653043 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.51 42.0 3.90e-01 88.5% 75.9%
3607147 2004.1.1.210 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ERCC3_RAD25_C 0.50 46.0 4.19e-01 99.5% 86.2%
3188618 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 46.0 4.05e-01 99.5% 94.0%
4987630 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 45.0 3.51e-01 97.9% 87.4%
4479403 2004.1.1.68 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IstB_IS21 0.50 38.0 3.55e-01 83.3% 62.9%
D3 medium residues 174-263
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06418.21 best CTP_synth_N 100.2 1.90e-28 100.0% 33.6%
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ihlB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.96 92.0 6.51e-01 100.0% 39.3%
3nvaA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.92 87.0 5.88e-01 100.0% 31.2%
3of5B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 56.0 4.21e-01 97.8% 35.9%
6bs3B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 54.0 3.68e-01 87.8% 26.8%
4hi0E00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 52.0 4.15e-01 100.0% 43.9%
3jyoA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 41.0 3.55e-01 82.2% 42.7%
4om8A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 51.0 4.07e-01 97.8% 44.9%
1kblA04 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.61 52.0 3.61e-01 97.8% 62.0%
1l5jA03 3.40.1060.10 Alpha Beta › 3-Layer(aba) Sandwich › Aconitase; Domain 2 › Aconitase, Domain 2 0.61 48.0 3.94e-01 86.7% 74.0%
5aj3K00 3.30.420.80 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 0.61 44.0 3.92e-01 77.8% 71.3%
5er6C00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 53.0 4.00e-01 100.0% 56.3%
2zc1A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.61 53.0 3.61e-01 97.8% 54.4%
4lhsA02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.60 52.0 4.19e-01 98.9% 63.3%
1uzmB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 52.0 4.05e-01 100.0% 56.4%
5aunB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 46.0 3.42e-01 81.1% 88.7%
2yk4A01 3.30.370.20 Alpha Beta › 2-Layer Sandwich › Barnase; Chain D › 0.60 39.0 4.05e-01 77.8% 72.0%
2gerA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 48.0 3.95e-01 98.9% 47.1%
3mkcA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.59 52.0 3.91e-01 100.0% 81.8%
1rvkA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.59 51.0 3.72e-01 97.8% 59.1%
4wesB04 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.59 43.0 4.20e-01 96.7% 70.4%
2vlbC00 3.40.50.12500 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 51.0 3.77e-01 95.6% 48.7%
3n4fA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.59 52.0 3.77e-01 100.0% 62.7%
2e87A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 48.0 3.83e-01 100.0% 42.6%
4c0hA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 45.0 3.40e-01 84.4% 72.8%
2chrA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.58 51.0 3.97e-01 100.0% 77.7%
3h78A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.58 50.0 4.28e-01 100.0% 82.6%
3cyjA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.58 50.0 3.76e-01 100.0% 63.3%
3il4A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.58 49.0 4.23e-01 96.7% 81.1%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.58 44.0 3.74e-01 82.2% 61.1%
2ovlA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.57 50.0 3.78e-01 100.0% 77.4%
2vshA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.57 48.0 3.67e-01 97.8% 38.6%
2qxlB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 50.0 4.45e-01 100.0% 96.3%
3n4eA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.57 50.0 3.65e-01 100.0% 60.6%
6et0A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.57 50.0 4.29e-01 100.0% 81.5%
4m0xA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.57 50.0 3.74e-01 100.0% 66.4%
2qjjD02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.57 50.0 3.71e-01 100.0% 70.4%
4n4pD00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 49.0 3.48e-01 97.8% 47.2%
2qgyA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.57 49.0 3.67e-01 97.8% 65.1%
3bjsA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.57 50.0 3.67e-01 100.0% 61.7%
3i4kA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.57 50.0 3.66e-01 100.0% 62.7%
3msyA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.56 49.0 3.70e-01 100.0% 64.1%
2qdeA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.56 49.0 3.64e-01 97.8% 54.4%
3c48A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 47.0 3.72e-01 100.0% 93.6%
4jaqA01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.56 49.0 3.84e-01 100.0% 73.4%
3obyA02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.56 48.0 4.56e-01 100.0% 95.4%
2pozA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.56 47.0 3.56e-01 100.0% 67.2%
3ddmA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.56 49.0 3.66e-01 100.0% 75.2%
3op2A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.55 49.0 3.63e-01 100.0% 63.8%
2h84A01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.55 48.0 3.73e-01 100.0% 73.5%
3gy1B02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.54 48.0 3.59e-01 100.0% 69.7%
3h75A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 44.0 3.53e-01 90.0% 70.9%
2opjA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.54 49.0 3.73e-01 100.0% 65.9%
4efzB00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 46.0 3.31e-01 97.8% 34.9%
1sh7A00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.54 46.0 3.37e-01 100.0% 77.6%
4uw9A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.53 47.0 4.07e-01 100.0% 98.6%
4c12A03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.52 45.0 3.86e-01 100.0% 61.8%
7jt8I02 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.52 44.0 3.86e-01 96.7% 77.1%
3px5A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.52 44.0 3.35e-01 100.0% 74.4%
4aktB00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.52 45.0 3.14e-01 100.0% 74.0%
1e8cB03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.52 45.0 3.94e-01 100.0% 69.0%
2ddmB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 44.0 3.23e-01 100.0% 69.7%
1asuA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 39.0 3.27e-01 83.3% 56.8%
2wsiA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 41.0 2.99e-01 93.3% 30.2%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4103299 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.99 97.0 6.45e-01 100.0% 32.1%
4948214 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.98 95.0 6.28e-01 100.0% 30.5%
3594528 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.98 93.0 6.20e-01 100.0% 30.9%
3704221 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.98 93.0 6.88e-01 100.0% 45.1%
4928635 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.98 95.0 6.46e-01 100.0% 34.7%
3339713 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.98 95.0 6.25e-01 100.0% 30.5%
3604894 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.97 92.0 6.01e-01 100.0% 27.9%
5028526 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.97 94.0 6.15e-01 100.0% 29.5%
3514466 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.92 85.0 5.72e-01 100.0% 30.3%
5064933 2004.1.1.141 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N 0.78 73.0 5.44e-01 100.0% 42.9%
3276368 2004.1.1.598 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF29907 0.71 62.0 5.00e-01 100.0% 49.7%
4339599 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.70 63.0 4.65e-01 100.0% 39.6%
3940369 2007.9.1.0 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain 0.69 62.0 5.31e-01 100.0% 62.8%
3667699 2007.9.1.0 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain 0.68 59.0 5.01e-01 96.7% 60.0%
3302168 2005.2.1.0 a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF 0.68 49.0 3.60e-01 75.6% 67.1%
4378077 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.68 58.0 4.29e-01 100.0% 37.3%
4940811 2004.1.1.67 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA 0.65 57.0 4.22e-01 98.9% 96.6%
None 0.63 48.0 3.15e-01 97.8% 17.7%
5000598 2008.3.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain 0.63 51.0 4.77e-01 87.8% 71.8%
4074012 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.62 47.0 4.26e-01 81.1% 78.4%
4517677 2002.1.1.54 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh 0.61 51.0 3.57e-01 94.4% 45.6%
4979608 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.60 52.0 4.76e-01 100.0% 98.4%
None 0.60 54.0 3.92e-01 100.0% 61.2%
4238915 2005.1.1.7 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.60 45.0 3.15e-01 77.8% 90.4%
5054246 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.60 54.0 3.91e-01 100.0% 83.5%
3462352 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.60 46.0 3.76e-01 83.3% 68.9%
3281289 2004.1.1.94 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 0.60 53.0 4.19e-01 100.0% 88.9%
3835389 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.60 46.0 3.30e-01 84.4% 80.3%
3937265 7590.1.1.6 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › ArgoMid 0.60 51.0 4.26e-01 98.9% 74.1%
3941002 2003.1.5.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.59 49.0 3.17e-01 97.8% 18.7%
2602454 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.59 51.0 4.61e-01 98.9% 95.3%
4067862 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.59 44.0 4.08e-01 80.0% 82.6%
4013532 7577.1.1.0 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases 0.59 51.0 3.33e-01 98.9% 34.3%
3972263 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.58 47.0 4.10e-01 100.0% 57.1%
2979135 2484.1.1.7 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_S11 0.58 42.0 3.95e-01 77.8% 83.6%
3521466 7577.1.1.4 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Pyridoxal_deC 0.58 51.0 3.43e-01 100.0% 39.5%
4536448 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 49.0 4.54e-01 97.8% 92.5%
4497431 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.58 49.0 4.50e-01 98.9% 96.0%
3286724 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 49.0 4.08e-01 93.3% 99.4%
5033346 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 50.0 4.54e-01 100.0% 94.4%
4976759 2002.1.1.10 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS 0.58 44.0 3.17e-01 90.0% 27.9%
3783486 2003.1.5.196 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM5-TYW2_MTfase, tRNA_U5-meth_tr 0.58 47.0 3.14e-01 92.2% 25.6%
4961401 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.58 49.0 3.56e-01 97.8% 55.4%
5017854 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.57 50.0 3.44e-01 100.0% 55.3%
5057668 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.57 49.0 3.82e-01 97.8% 44.8%
4878063 2003.1.10.19 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › PreAtp-grasp 0.57 45.0 4.09e-01 93.3% 62.6%
4344398 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.57 50.0 3.73e-01 100.0% 75.1%
4982024 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.57 47.0 3.40e-01 94.4% 57.5%
149947 7581.1.1.12 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ACP_syn_III_C 0.57 49.0 4.33e-01 100.0% 79.4%
4939492 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.56 47.0 4.35e-01 97.8% 91.2%
4974007 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 48.0 4.48e-01 100.0% 85.0%
4383805 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.56 49.0 3.61e-01 97.8% 52.7%
5070445 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.56 47.0 4.42e-01 98.9% 88.3%
4964957 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 47.0 4.44e-01 97.8% 88.7%
4564088 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.56 48.0 4.42e-01 100.0% 86.4%
4965260 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.56 48.0 3.60e-01 100.0% 73.2%
5081896 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.56 46.0 4.16e-01 94.4% 89.2%
1174562 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.56 49.0 3.68e-01 100.0% 77.2%
3500810 2008.1.1.68 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PND 0.55 47.0 4.29e-01 100.0% 71.7%
4021388 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.55 47.0 3.35e-01 97.8% 36.9%
3253242 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.55 47.0 3.35e-01 97.8% 35.8%
4454425 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 44.0 3.46e-01 92.2% 54.9%
5069292 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.54 45.0 4.27e-01 96.7% 86.1%
3595309 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 44.0 3.49e-01 97.8% 41.5%
5058066 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.54 45.0 4.26e-01 97.8% 97.4%
2877622 2002.1.1.49 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldolase 0.54 47.0 3.61e-01 100.0% 52.7%
3731466 2004.1.1.238 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,ResIII 0.54 46.0 2.88e-01 97.8% 36.1%
5014179 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.53 46.0 3.33e-01 100.0% 77.2%
3662015 2003.1.5.10 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Fibrillarin 0.53 44.0 3.57e-01 91.1% 88.0%
4523185 7570.1.1.1 a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C 0.53 47.0 3.92e-01 100.0% 66.9%
3699620 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.53 43.0 3.45e-01 98.9% 42.1%
3577032 2002.1.1.180 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › hDGE_amylase 0.53 45.0 3.49e-01 98.9% 82.7%
4943055 2004.1.1.1219 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7504 0.53 45.0 3.42e-01 95.6% 47.3%
3166916 2484.1.1.153 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.52 44.0 3.14e-01 100.0% 53.8%
2855902 7581.1.1.1 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N 0.51 43.0 4.00e-01 96.7% 80.5%
D4 medium residues 415-473
PDB
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4zdjA02 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.91 59.0 3.79e-01 100.0% 16.5%
2v4uA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.78 62.0 3.93e-01 100.0% 18.7%
2ghrA01 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.74 49.0 3.20e-01 100.0% 16.3%
1qdlB00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.72 48.0 3.32e-01 100.0% 21.0%
4e5vB00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.62 39.0 2.55e-01 100.0% 13.6%
7d4rB01 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.60 53.0 3.57e-01 100.0% 26.9%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3969444 2007.1.1.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 1.00 96.0 5.95e-01 100.0% 22.3%
3974508 2007.1.1.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.88 58.0 3.72e-01 100.0% 17.0%
4313202 2007.1.1.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.86 68.0 4.22e-01 100.0% 17.3%
4944353 2007.1.1.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.84 66.0 4.18e-01 100.0% 18.8%
4975583 2007.1.1.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 0.81 64.0 4.03e-01 100.0% 18.6%
158594 2007.1.1.43 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase, Peptidase_C26 0.74 59.0 3.70e-01 100.0% 18.8%
4105416 2007.1.1.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.74 69.0 4.34e-01 100.0% 21.9%
3429986 10.32.1.37 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin 0.53 43.0 3.28e-01 98.3% 89.7%
3636789 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.50 39.0 2.50e-01 88.1% 80.9%