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CAKLQF020000008.1__CAH1082002.1__SAMEA5780031_01874__00119

Bact-Vir

CAKLQF020000008.1__CAH1082002.1__SAMEA5780031_01874__00119

Identity

Kingdom:
phage

Quality

84.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-118
PDB
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3b0cW00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.66 40.0 4.99e-01 74.6% 100.0%
1aisB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 34.0 3.72e-01 87.3% 61.6%
4fp4A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.62 45.0 3.59e-01 100.0% 36.6%
5b00A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.61 47.0 3.64e-01 100.0% 37.2%
4m70B00 1.10.246.200 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain 0.60 43.0 4.75e-01 93.2% 96.7%
2ch7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.60 41.0 3.00e-01 70.3% 77.7%
3if8B02 1.20.58.730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 36.0 3.92e-01 88.1% 72.0%
2y1eA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.58 36.0 4.07e-01 90.7% 82.8%
3lynB00 1.20.150.10 Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein 0.58 45.0 4.47e-01 97.5% 79.0%
2uxwA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.58 42.0 4.14e-01 88.1% 70.0%
2pv4A00 1.10.3440.10 Mainly Alpha › Orthogonal Bundle › Sama2622-like fold › Sama2622-like 0.57 48.0 4.47e-01 99.2% 72.4%
3m03B00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 31.0 3.48e-01 87.3% 65.3%
4ysxC00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.57 49.0 4.50e-01 94.1% 71.9%
7yu4A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.57 51.0 3.97e-01 99.2% 50.2%
7ys6A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.56 51.0 3.90e-01 99.2% 76.0%
2fbqA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 49.0 4.13e-01 99.2% 93.4%
4xt1A00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.56 48.0 3.66e-01 96.6% 43.6%
2y44A00 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.55 44.0 3.75e-01 83.1% 81.5%
1eq1A00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.55 41.0 3.67e-01 77.1% 83.1%
4okmD00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.55 45.0 3.36e-01 99.2% 33.8%
1tj7A02 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.55 42.0 3.25e-01 82.2% 54.8%
6vmsR00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.55 49.0 3.75e-01 99.2% 73.7%
2ficB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.55 44.0 3.70e-01 85.6% 80.6%
1w33A00 1.10.3160.10 Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 0.54 42.0 3.65e-01 81.4% 71.3%
1gq2A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 44.0 3.31e-01 90.7% 79.7%
3dyjA02 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.53 44.0 4.08e-01 90.7% 93.4%
4k5yA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 46.0 3.69e-01 99.2% 77.8%
1gakA00 1.20.150.10 Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein 0.52 42.0 4.05e-01 97.5% 75.9%
3cazB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.51 40.0 3.32e-01 83.1% 77.1%
2oduA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 38.0 4.02e-01 92.4% 87.6%
1gqeA01 1.20.58.410 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor 0.51 41.0 4.22e-01 85.6% 91.2%
3npiB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 43.0 3.65e-01 96.6% 89.5%
3am6A00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.50 44.0 3.65e-01 100.0% 71.4%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.50 33.0 3.71e-01 91.5% 89.7%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3976839 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.89 73.0 7.93e-01 100.0% 100.0%
3173999 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.69 46.0 4.92e-01 96.6% 79.0%
3605545 5082.1.1.1 alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux 0.65 50.0 3.95e-01 94.1% 39.6%
3804317 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.65 49.0 5.06e-01 93.2% 82.3%
3974221 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.64 39.0 3.84e-01 74.6% 54.6%
3432743 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.62 48.0 5.11e-01 93.2% 95.0%
3582217 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.62 54.0 5.06e-01 94.9% 81.4%
3592920 611.4.1.0 alpha bundles › N-cbl like › PG0775 C-terminal domain-like › PG0775 C-terminal domain-like 0.62 42.0 4.28e-01 85.6% 71.3%
3394799 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.61 51.0 3.82e-01 89.0% 51.6%
3774397 150.5.1.67 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › NEDD4_Bsd2 0.61 43.0 4.79e-01 72.9% 95.8%
4959229 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.61 49.0 4.18e-01 86.4% 90.0%
3227811 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.60 54.0 4.97e-01 99.2% 75.5%
3216129 604.5.1.0 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.60 41.0 4.07e-01 70.3% 91.2%
3940808 1015.1.1.8 alpha complex topology › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › DUF7802 0.59 49.0 4.03e-01 89.8% 81.9%
3701892 604.39.1.0 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters 0.59 50.0 4.49e-01 92.4% 75.2%
3398509 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.55 49.0 3.72e-01 100.0% 53.7%
5071753 5065.1.1.1 alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.55 47.0 3.70e-01 95.8% 96.3%
5030821 3542.1.1.0 alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases 0.54 48.0 3.70e-01 96.6% 98.1%
4271561 5045.1.1.1 alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A 0.54 48.0 3.93e-01 100.0% 93.0%
4991828 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.54 44.0 3.19e-01 89.0% 29.7%
3245491 5001.1.1.84 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srz 0.54 48.0 3.65e-01 99.2% 72.8%
3949691 304.28.1.13 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › MMPL 0.53 47.0 3.10e-01 97.5% 62.1%
4959935 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.53 45.0 3.96e-01 94.9% 64.3%
3965797 3355.1.1.1 alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Na_sulph_symp 0.53 47.0 3.19e-01 100.0% 34.3%
3588332 5069.1.1.23 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF2798 0.53 42.0 4.02e-01 96.6% 72.1%
3666214 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.53 47.0 4.51e-01 98.3% 84.4%
3679942 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.53 47.0 3.38e-01 96.6% 34.6%
3781094 5059.1.1.1 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.53 37.0 2.71e-01 72.9% 57.3%
3948790 5051.1.1.9 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Transp_cyt_pur 0.53 47.0 3.11e-01 96.6% 73.5%
3181376 5001.1.1.3 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 0.53 46.0 3.36e-01 95.8% 39.4%
3295189 5041.1.1.0 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.53 46.0 4.15e-01 96.6% 83.0%
4109428 5045.1.1.1 alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A 0.52 46.0 3.92e-01 100.0% 96.5%
4996725 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.52 42.0 4.20e-01 94.1% 86.7%
3522682 601.19.1.17 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Niban2 0.52 46.0 3.56e-01 97.5% 45.5%
3481292 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.51 37.0 3.52e-01 74.6% 94.3%
4227021 5045.1.1.1 alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A 0.51 45.0 3.69e-01 100.0% 90.1%
4554417 5073.1.1.11 alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_C 0.50 45.0 3.24e-01 100.0% 73.1%
3705474 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 35.0 2.66e-01 70.3% 37.3%
D2 high residues 133-191
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07290.18 best YqiJ_OB 60.0 2.60e-16 96.6% 92.2%
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wwvA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.92 77.0 7.51e-01 100.0% 81.2%
3cp0A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.89 77.0 7.49e-01 100.0% 85.7%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 67.0 5.88e-01 100.0% 90.0%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 64.0 5.25e-01 100.0% 82.0%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 64.0 5.39e-01 100.0% 88.2%
6jy5B00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.70 64.0 5.67e-01 100.0% 90.2%
2awnC02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.70 61.0 5.54e-01 100.0% 73.1%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 61.0 5.51e-01 100.0% 87.7%
3kf6A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 60.0 4.64e-01 100.0% 54.4%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 52.0 5.62e-01 81.4% 98.0%
4me3A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 59.0 5.08e-01 100.0% 80.4%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.67 54.0 5.20e-01 88.1% 83.6%
2pi2D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 58.0 4.65e-01 100.0% 52.0%
1kl9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 58.0 5.40e-01 100.0% 77.3%
1uwvA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 54.0 5.08e-01 100.0% 72.6%
1yezA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 51.0 4.96e-01 100.0% 76.5%
2qgqA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 56.0 5.60e-01 100.0% 96.7%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 53.0 4.18e-01 100.0% 54.6%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 54.0 4.41e-01 100.0% 62.9%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.62 50.0 5.06e-01 100.0% 89.7%
4qmgC01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 50.0 3.80e-01 100.0% 54.7%
1amuA04 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.59 41.0 3.58e-01 74.6% 89.6%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 42.0 4.20e-01 100.0% 73.8%
7q04F01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.58 47.0 3.88e-01 91.5% 81.7%
4lx3A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.56 39.0 3.27e-01 72.9% 64.4%
3plsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 49.0 4.10e-01 100.0% 75.0%
2rf4E02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 46.0 4.26e-01 100.0% 98.8%
4isbB02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.56 38.0 3.25e-01 72.9% 88.8%
2zylA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.55 46.0 3.57e-01 93.2% 58.5%
2kvaA01 2.70.130.10 Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain 0.55 47.0 3.66e-01 100.0% 71.6%
2q2rA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 39.0 2.81e-01 74.6% 62.3%
3gkeA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.54 45.0 3.51e-01 93.2% 61.5%
1u4dA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 47.0 4.19e-01 100.0% 89.2%
2r6fA04 1.10.8.280 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › ABC transporter ATPase domain-like 0.53 40.0 3.23e-01 83.1% 58.5%
2v5nA02 2.70.130.10 Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain 0.53 45.0 3.52e-01 100.0% 75.6%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.52 43.0 3.03e-01 98.3% 43.3%
6h1bA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.52 35.0 3.05e-01 71.2% 97.1%
1lurA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 43.0 2.76e-01 96.6% 95.4%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 37.0 3.24e-01 88.1% 50.5%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 38.0 3.29e-01 84.7% 58.7%
3ebtA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 41.0 3.26e-01 93.2% 46.6%
3r1kA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 42.0 3.25e-01 93.2% 72.2%
4gs5A02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.50 40.0 3.39e-01 91.5% 87.6%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3976838 2.1.1.295 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › YqiJ_OB 0.96 91.0 8.01e-01 100.0% 76.2%
4033331 2.1.1.19 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD 0.94 77.0 7.96e-01 100.0% 92.7%
4990672 2.1.1.19 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD 0.93 76.0 7.56e-01 100.0% 85.0%
5001546 2.1.1.19 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD 0.93 78.0 7.56e-01 100.0% 81.5%
5039058 2.1.1.19 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD 0.91 74.0 7.40e-01 100.0% 85.0%
5047776 2.1.1.19 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD 0.91 76.0 7.10e-01 100.0% 74.3%
3951104 2.1.1.19 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD 0.90 78.0 7.59e-01 100.0% 85.7%
3961193 2.1.1.19 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD 0.90 77.0 7.28e-01 100.0% 78.3%
167712 2.1.1.19 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD 0.89 77.0 7.49e-01 100.0% 85.7%
4440715 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.89 78.0 7.59e-01 100.0% 86.2%
5077649 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.89 82.0 7.72e-01 100.0% 85.7%
4944447 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.88 81.0 7.73e-01 100.0% 88.2%
4963531 2.1.1.262 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31148 0.86 76.0 7.58e-01 98.3% 93.3%
5052147 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.83 77.0 7.21e-01 100.0% 85.7%
5022965 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.80 63.0 6.58e-01 100.0% 94.3%
4583050 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.79 66.0 6.22e-01 100.0% 77.1%
4012257 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 66.0 5.32e-01 100.0% 65.8%
1549576 2.1.1.1 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.74 66.0 5.01e-01 100.0% 54.7%
4943419 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 60.0 6.01e-01 100.0% 88.3%
4616273 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 51.0 5.69e-01 84.7% 95.6%
4259808 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.72 58.0 6.00e-01 98.3% 96.3%
4237317 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.72 62.0 6.20e-01 100.0% 93.3%
4341423 2.1.1.279 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF4131 0.71 63.0 5.00e-01 100.0% 75.8%
3389015 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 63.0 5.30e-01 100.0% 72.0%
2330653 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.71 63.0 5.40e-01 100.0% 86.2%
5057366 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 57.0 5.88e-01 98.3% 94.5%
4998126 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.70 63.0 5.56e-01 100.0% 83.5%
5063136 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.70 62.0 5.84e-01 98.3% 97.1%
4485753 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.70 63.0 6.27e-01 100.0% 98.3%
3517758 2.1.1.106 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PRS7_OB 0.70 63.0 5.65e-01 100.0% 73.8%
4415340 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.70 57.0 5.75e-01 100.0% 90.0%
3624912 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 60.0 4.99e-01 100.0% 56.0%
5016802 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 60.0 5.90e-01 100.0% 89.1%
4202656 2.1.1.115 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PabTrmU54_TRAM_dom 0.69 56.0 5.43e-01 100.0% 80.0%
4257882 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.69 55.0 5.38e-01 100.0% 80.0%
4048586 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.69 57.0 5.41e-01 100.0% 77.1%
4327619 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.68 55.0 5.21e-01 100.0% 74.3%
4653384 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.68 60.0 6.03e-01 100.0% 96.7%
5080202 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.68 62.0 4.78e-01 100.0% 92.0%
5029943 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.68 55.0 4.94e-01 100.0% 65.0%
4185700 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.68 55.0 5.66e-01 98.3% 96.4%
3968675 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 59.0 4.61e-01 98.3% 46.9%
4250680 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 59.0 5.48e-01 100.0% 84.0%
3510739 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.67 53.0 5.21e-01 100.0% 80.0%
3589655 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.67 53.0 5.08e-01 100.0% 74.3%
4957662 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.67 53.0 5.08e-01 100.0% 74.3%
4241462 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.67 53.0 5.19e-01 100.0% 80.0%
3971829 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.67 53.0 5.17e-01 100.0% 80.0%
4505995 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 58.0 5.69e-01 98.3% 93.8%
4606688 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.66 53.0 4.91e-01 88.1% 74.7%
4374668 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.66 52.0 5.13e-01 100.0% 81.2%
4984379 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.66 57.0 5.35e-01 100.0% 98.7%
3180337 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 57.0 4.17e-01 100.0% 67.9%
4150593 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.65 58.0 5.66e-01 100.0% 90.8%
3783321 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.65 54.0 4.24e-01 100.0% 57.9%
5044484 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.64 55.0 4.83e-01 100.0% 77.4%
3172670 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.64 57.0 4.43e-01 100.0% 46.2%
4978710 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.64 54.0 4.89e-01 100.0% 87.1%
5063316 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 54.0 4.32e-01 100.0% 80.8%
5072874 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 51.0 5.01e-01 100.0% 84.6%
4625348 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.62 50.0 5.01e-01 100.0% 86.7%
3963148 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 51.0 4.48e-01 100.0% 78.0%
3969569 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.62 49.0 4.91e-01 98.3% 85.0%
5023276 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 51.0 4.67e-01 100.0% 78.8%
3236144 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 51.0 4.30e-01 100.0% 73.6%
3239000 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 51.0 4.09e-01 100.0% 56.2%
4211209 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.60 49.0 4.75e-01 100.0% 78.5%
3558931 2.6.1.1 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.60 51.0 3.83e-01 100.0% 59.4%
3670765 11.1.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.57 48.0 3.56e-01 98.3% 64.7%
4183857 325.1.7.30 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Peptidase_M23 0.57 45.0 4.18e-01 100.0% 68.0%
3576300 11.1.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.57 48.0 3.49e-01 100.0% 61.6%
4159666 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.57 45.0 3.69e-01 100.0% 46.8%
3815957 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.56 42.0 2.70e-01 84.7% 99.4%
3799203 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 47.0 3.45e-01 100.0% 62.2%
4349950 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 44.0 4.43e-01 100.0% 85.0%
3543640 11.1.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.54 46.0 3.46e-01 100.0% 67.1%
5057746 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.54 45.0 3.14e-01 93.2% 78.2%
3261838 63.1.1.0 beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain 0.53 45.0 3.52e-01 100.0% 73.6%
4456732 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.53 41.0 3.72e-01 94.9% 62.5%
5024242 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.52 45.0 3.41e-01 100.0% 69.7%
5008031 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.52 37.0 3.32e-01 91.5% 52.9%
4068978 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 39.0 3.71e-01 100.0% 68.0%
4119875 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 40.0 3.94e-01 100.0% 78.5%
4127839 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 40.0 3.75e-01 100.0% 68.0%
5024498 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.50 43.0 3.39e-01 100.0% 71.9%