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CAKLQF020000008.1__CAH1082012.1__SAMEA5780031_01879__00124
Bact-VirCAKLQF020000008.1__CAH1082012.1__SAMEA5780031_01879__00124
Identity
- Kingdom:
- phage
Quality
81.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-97
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09600.16 best | Cyd_oper_YbgE | 75.2 | 6.30e-21 | 97.5% | 96.2% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kjmB01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.72 | 53.0 | 5.79e-01 | 100.0% | 98.4% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.67 | 53.0 | 5.46e-01 | 100.0% | 92.1% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 58.0 | 5.56e-01 | 100.0% | 86.3% |
| 1bvp101 | 1.10.250.10 | Mainly Alpha › Orthogonal Bundle › Bluetongue Virus 10, subunit 1; domain 1 › Bluetongue Virus 10, subunit 1, domain 1 | 0.62 | 49.0 | 4.30e-01 | 86.3% | 77.5% |
| 1werA01 | 1.10.506.10 | Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 | 0.60 | 45.0 | 3.55e-01 | 81.2% | 59.7% |
| 2okuA00 | 1.20.120.470 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Acyl-CoA dehydrogenase, C-terminal domain | 0.59 | 51.0 | 4.53e-01 | 100.0% | 67.2% |
| 8e9gK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 43.0 | 4.14e-01 | 82.5% | 69.2% |
| 2wl8C00 | 1.20.120.900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain | 0.58 | 50.0 | 4.58e-01 | 100.0% | 87.2% |
| 4k0dA00 | 1.20.120.1730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 50.0 | 4.21e-01 | 100.0% | 67.1% |
| 4i1mB01 | 1.20.120.1700 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 51.0 | 4.36e-01 | 100.0% | 72.1% |
| 2c0uA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.57 | 49.0 | 3.95e-01 | 100.0% | 57.4% |
| 1rqgA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.56 | 43.0 | 3.55e-01 | 82.5% | 62.3% |
| 1xjaB00 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.56 | 49.0 | 4.04e-01 | 100.0% | 97.4% |
| 1lkvX02 | 1.10.220.30 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain | 0.55 | 47.0 | 3.93e-01 | 92.5% | 60.6% |
| 2ap3A00 | 1.20.120.570 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like | 0.55 | 45.0 | 3.48e-01 | 92.5% | 55.7% |
| 2xseA00 | 1.20.120.1440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › JBP1, DNA-binding domain | 0.54 | 42.0 | 3.38e-01 | 83.7% | 44.0% |
| 1td6A03 | 1.10.472.40 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3 | 0.53 | 36.0 | 3.47e-01 | 100.0% | 59.8% |
| 4i1eA03 | 1.25.10.30 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain | 0.53 | 36.0 | 3.09e-01 | 72.5% | 41.7% |
| 2j0wA02 | 1.20.120.1320 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain | 0.53 | 44.0 | 4.28e-01 | 98.8% | 86.0% |
| 7vevA01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.52 | 47.0 | 3.28e-01 | 98.8% | 72.6% |
| 3ay5A01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.52 | 44.0 | 3.75e-01 | 95.0% | 94.7% |
| 1cnt200 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 44.0 | 3.73e-01 | 97.5% | 57.7% |
| 3jyhA02 | 1.20.120.980 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine carboxypeptidase S28, SKS domain | 0.51 | 42.0 | 3.53e-01 | 95.0% | 61.7% |
| 2wdqC00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.50 | 43.0 | 3.80e-01 | 97.5% | 85.1% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3980109 | 632.24.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › GBS CAMP factor C-terminal domain › GBS CAMP factor C-terminal domain › Cyd_oper_YbgE | 0.86 | 80.0 | 7.94e-01 | 100.0% | 96.4% |
| 4044489 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.73 | 56.0 | 5.51e-01 | 100.0% | 76.5% |
| 3308985 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.72 | 60.0 | 5.51e-01 | 100.0% | 71.0% |
| 4953007 | 632.11.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DUF357 | 0.69 | 54.0 | 5.56e-01 | 100.0% | 89.3% |
| 4970998 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.65 | 56.0 | 5.22e-01 | 97.5% | 100.0% |
| 4360723 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.65 | 51.0 | 4.96e-01 | 100.0% | 76.7% |
| 4142527 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.65 | 50.0 | 4.54e-01 | 100.0% | 60.0% |
| 3221571 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.65 | 57.0 | 4.94e-01 | 100.0% | 66.4% |
| 3965628 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.64 | 50.0 | 4.91e-01 | 100.0% | 77.8% |
| 4129856 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.64 | 49.0 | 4.86e-01 | 100.0% | 78.8% |
| 5009815 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.63 | 56.0 | 4.74e-01 | 100.0% | 76.3% |
| 4934784 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.59 | 49.0 | 4.88e-01 | 100.0% | 88.2% |
| 3266281 | 5059.1.1.3 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT | 0.59 | 53.0 | 3.48e-01 | 100.0% | 62.5% |
| 3447992 | 3896.1.1.2 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase › DUF92 | 0.58 | 46.0 | 3.28e-01 | 87.5% | 58.8% |
| 3186380 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.58 | 45.0 | 4.22e-01 | 85.0% | 88.0% |
| 3199087 | 5038.2.1.1 ↗ | alpha superhelices › Cytochrome c oxidase subunit I-like › MAPEG domain-like › MAPEG domain-like › MAPEG | 0.58 | 50.0 | 4.20e-01 | 100.0% | 55.7% |
| 3879813 | 197.1.1.3 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › ACBP | 0.58 | 50.0 | 4.44e-01 | 100.0% | 74.2% |
| 3318455 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.57 | 41.0 | 3.49e-01 | 77.5% | 96.4% |
| 3177832 | 174.1.1.62 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › PF27705 | 0.56 | 47.0 | 3.80e-01 | 93.8% | 59.4% |
| 3237808 | 5059.1.1.11 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TMEM144 | 0.56 | 46.0 | 3.17e-01 | 92.5% | 75.7% |
| 4937260 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.55 | 43.0 | 3.22e-01 | 86.3% | 39.0% |
| 4119921 | 1128.1.1.23 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Ycf66_N | 0.55 | 45.0 | 4.33e-01 | 100.0% | 79.8% |
| 5030319 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.55 | 48.0 | 3.32e-01 | 100.0% | 68.3% |
| 4994772 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.54 | 46.0 | 3.26e-01 | 97.5% | 73.0% |
| 3211335 | 3755.4.1.30 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › TMEM107 | 0.54 | 47.0 | 4.12e-01 | 100.0% | 71.2% |
| 3964803 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.54 | 45.0 | 3.10e-01 | 92.5% | 64.5% |
| 4948074 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.53 | 41.0 | 2.76e-01 | 83.7% | 25.2% |
| 4946098 | 140.1.1.37 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA_bind | 0.53 | 42.0 | 2.86e-01 | 91.3% | 26.7% |
| 4593075 | 5059.1.1.9 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Sugar_transport | 0.53 | 40.0 | 2.87e-01 | 86.3% | 31.2% |
| 3648771 | 109.4.1.359 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C | 0.52 | 37.0 | 2.26e-01 | 76.2% | 23.0% |
| 4941041 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.52 | 43.0 | 3.09e-01 | 98.8% | 96.2% |
| 3575230 | 189.1.1.1 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RasGAP | 0.52 | 46.0 | 3.34e-01 | 100.0% | 78.3% |
| 4025084 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.52 | 44.0 | 2.96e-01 | 95.0% | 73.2% |
| 5015029 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.52 | 43.0 | 3.01e-01 | 95.0% | 65.4% |
| 3186203 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.51 | 40.0 | 2.75e-01 | 86.3% | 92.3% |
| 3944252 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.51 | 40.0 | 2.87e-01 | 88.7% | 96.4% |
| 4034460 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.51 | 41.0 | 2.96e-01 | 88.7% | 33.6% |
| 4933380 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.51 | 43.0 | 2.97e-01 | 95.0% | 68.3% |
| 3178547 | 5059.1.1.3 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT | 0.51 | 45.0 | 3.05e-01 | 98.8% | 70.0% |
| 5062225 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.51 | 44.0 | 3.05e-01 | 98.8% | 78.2% |
| 3609749 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.51 | 41.0 | 2.82e-01 | 90.0% | 26.6% |