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CAKLQF020000009.1__CAH1083484.1__SAMEA5780031_02017__00112
Bact-VirCAKLQF020000009.1__CAH1083484.1__SAMEA5780031_02017__00112
Identity
- Kingdom:
- phage
Quality
77.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-84
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09831.15 best | DUF2058 | 49.4 | 8.30e-13 | 100.0% | 43.7% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zq3P00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 38.0 | 3.94e-01 | 71.6% | 76.5% |
D2
high
residues 93-151
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09831.15 best | DUF2058 | 51.0 | 2.70e-13 | 100.0% | 33.3% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p1mB01 | 3.30.160.880 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain | 0.62 | 37.0 | 4.12e-01 | 94.9% | 77.8% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 39.0 | 3.57e-01 | 100.0% | 50.6% |
| 1nxmA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 40.0 | 2.92e-01 | 83.1% | 53.6% |
| 7l9pK01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.55 | 38.0 | 3.02e-01 | 72.9% | 96.6% |
| 3ucsA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.53 | 43.0 | 3.67e-01 | 91.5% | 72.7% |
| 3u1nB01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.51 | 39.0 | 2.60e-01 | 94.9% | 57.9% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 40.0 | 3.38e-01 | 88.1% | 56.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3946755 | 605.1.1.26 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF2058 | 0.95 | 85.0 | 6.57e-01 | 94.9% | 53.9% |
| 3289362 | 101.1.2.610 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH2_Lhr | 0.77 | 54.0 | 4.40e-01 | 74.6% | 41.0% |
| 3959734 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 53.0 | 4.53e-01 | 74.6% | 45.3% |
| 4585224 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.60 | 46.0 | 3.98e-01 | 86.4% | 52.0% |
| 3595258 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 48.0 | 4.24e-01 | 100.0% | 94.7% |
| 3602429 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.57 | 43.0 | 3.77e-01 | 94.9% | 52.1% |
| 4983242 | 2004.1.1.97 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB | 0.56 | 44.0 | 3.03e-01 | 89.8% | 66.1% |
| 4991835 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 39.0 | 4.19e-01 | 100.0% | 94.0% |
| 5054757 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 37.0 | 3.07e-01 | 76.3% | 95.9% |
| 4967853 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.53 | 41.0 | 4.23e-01 | 91.5% | 89.1% |
| 5071804 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.52 | 36.0 | 3.21e-01 | 72.9% | 76.7% |
| 5079449 | 2004.1.1.97 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB | 0.51 | 38.0 | 2.79e-01 | 81.4% | 95.9% |
| 3203481 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 39.0 | 4.06e-01 | 89.8% | 92.7% |
| 4990060 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.50 | 35.0 | 3.78e-01 | 76.3% | 100.0% |