Back to structures

CAKLQF020000009.1__CAH1083520.1__SAMEA5780031_02035__00130

Bact-Vir

CAKLQF020000009.1__CAH1083520.1__SAMEA5780031_02035__00130

Identity

Kingdom:
phage

Quality

75.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 5-63
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4d8qF03 3.50.7.10 Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL 0.53 39.0 2.84e-01 86.4% 28.4%
2w5qA01 3.30.1120.170 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.52 37.0 3.26e-01 76.3% 57.0%
1u9jA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 38.0 2.47e-01 79.7% 36.1%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3626962 390.1.1.0 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.86 50.0 3.20e-01 76.3% 15.6%
5059258 109.4.1.95 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.74 51.0 3.34e-01 96.6% 19.1%
3266678 375.10.1.2 few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.69 52.0 5.08e-01 86.4% 75.4%
3924201 375.10.1.2 few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.67 50.0 4.89e-01 81.4% 75.0%
3448510 375.10.1.2 few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.67 49.0 4.85e-01 81.4% 73.8%
3819271 375.10.1.2 few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.65 48.0 4.74e-01 84.7% 75.4%
4283998 375.10.1.2 few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.64 47.0 4.77e-01 84.7% 81.7%
4017358 375.10.1.2 few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.63 46.0 4.59e-01 79.7% 80.0%
3743904 375.10.1.2 few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE 0.63 46.0 4.63e-01 81.4% 81.7%
5049227 192.18.1.0 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.62 52.0 4.09e-01 91.5% 50.0%
3950698 304.48.1.4 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc 0.59 43.0 2.84e-01 76.3% 43.2%
3464650 2006.1.5.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl 0.58 41.0 2.50e-01 74.6% 25.1%
5061445 375.1.1.133 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ribbon_3 0.58 47.0 4.53e-01 100.0% 81.4%
4241211 375.1.1.204 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PolC_DP2_central 0.57 42.0 3.58e-01 84.7% 46.7%
3187460 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.52 41.0 2.94e-01 88.1% 33.0%
5051287 109.4.1.198 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.52 39.0 2.61e-01 79.7% 22.4%