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CAKLQF020000010.1__CAH1084862.1__SAMEA5780031_02070__00015

Bact-Vir

CAKLQF020000010.1__CAH1084862.1__SAMEA5780031_02070__00015

Identity

Kingdom:
phage

Quality

90.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 31-49_291-368
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13609.13 best Porin_4 33.5 5.90e-08 82.5% 23.5%
CATH (72)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3eniC00 2.50.10.10 Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A 0.90 64.0 4.14e-01 80.4% 19.7%
2o4vA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.89 84.0 5.32e-01 100.0% 91.0%
3vy8X00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.87 83.0 5.46e-01 100.0% 97.1%
6eheA01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.81 76.0 5.19e-01 99.0% 96.3%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.79 59.0 5.03e-01 77.3% 59.5%
1xkwA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.78 60.0 3.66e-01 80.4% 17.8%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.76 59.0 4.17e-01 80.4% 37.5%
3jtyB01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.76 70.0 4.61e-01 100.0% 97.9%
1lshA01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.75 67.0 4.82e-01 96.9% 89.7%
4k7rA02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.73 50.0 5.58e-01 70.1% 92.2%
4gf4A00 2.40.160.180 Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB 0.73 68.0 4.68e-01 100.0% 89.3%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.72 67.0 4.73e-01 100.0% 86.4%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.71 66.0 5.58e-01 100.0% 93.5%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.71 66.0 4.57e-01 100.0% 98.3%
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.71 66.0 5.33e-01 100.0% 92.4%
7btxA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.70 54.0 3.62e-01 80.4% 28.5%
3r87A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.69 41.0 3.72e-01 100.0% 43.9%
2hljA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.68 41.0 3.67e-01 100.0% 43.1%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.68 63.0 5.36e-01 100.0% 96.7%
1tk1A00 3.40.1500.10 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic 0.67 51.0 3.92e-01 80.4% 83.6%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.67 61.0 3.69e-01 100.0% 35.8%
2nujA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.65 40.0 3.49e-01 100.0% 40.5%
4fqeA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.65 60.0 4.93e-01 100.0% 96.5%
4k00A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 39.0 3.45e-01 100.0% 42.3%
3b7kB01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 39.0 3.47e-01 100.0% 42.1%
2gvhB02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 39.0 3.70e-01 100.0% 52.1%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.62 57.0 4.34e-01 100.0% 94.8%
1yliB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 41.0 3.61e-01 100.0% 45.3%
1pn2B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 40.0 3.46e-01 100.0% 42.6%
1cbyA00 3.40.198.10 Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like 0.60 47.0 3.52e-01 82.5% 54.6%
2porA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.60 55.0 3.84e-01 100.0% 70.4%
3ck1A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 37.0 3.24e-01 100.0% 41.3%
2qiyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 45.0 4.06e-01 80.4% 81.3%
1usuB00 3.15.10.20 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Activator of Hsp90 ATPase Aha1, N-terminal domain 0.59 41.0 3.76e-01 73.2% 59.8%
5azpA02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.59 40.0 4.27e-01 70.1% 92.6%
1uliB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 42.0 3.45e-01 75.3% 78.0%
2gvhC01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 41.0 3.68e-01 74.2% 83.1%
4mtuA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 40.0 3.53e-01 72.2% 87.4%
5egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 38.0 3.22e-01 70.1% 74.9%
2qwzA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 43.0 3.88e-01 80.4% 83.5%
3e1eC00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 43.0 3.78e-01 80.4% 78.7%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 44.0 4.03e-01 83.5% 75.2%
4hzoA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 42.0 3.01e-01 80.4% 81.7%
3lbeB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 42.0 3.91e-01 80.4% 86.3%
3f1tB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 42.0 3.77e-01 79.4% 82.4%
3ff0A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 44.0 3.92e-01 85.6% 74.5%
4e6fA00 3.30.530.80 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.56 46.0 3.87e-01 91.8% 94.7%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 42.0 3.85e-01 80.4% 73.4%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 46.0 3.82e-01 90.7% 88.7%
3qooA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 38.0 3.41e-01 71.1% 90.3%
3cnxA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 42.0 3.71e-01 80.4% 77.5%
2q2bA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 39.0 3.49e-01 75.3% 80.1%
4rljA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 39.0 3.45e-01 75.3% 100.0%
4k02A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 3.78e-01 80.4% 89.8%
4ienA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 3.49e-01 79.4% 75.3%
5bkaE01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 38.0 3.54e-01 75.3% 94.7%
4ae7A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 3.30e-01 80.4% 79.6%
3ir3A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 40.0 3.64e-01 77.3% 97.6%
1lo7A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 36.0 3.23e-01 70.1% 91.4%
3bgyA00 3.20.100.10 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like 0.53 49.0 3.70e-01 100.0% 78.8%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 3.69e-01 80.4% 76.4%
4e3eA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 41.0 2.90e-01 86.6% 75.2%
4gn2A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 47.0 3.53e-01 99.0% 90.4%
1y7uA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 37.0 3.16e-01 73.2% 72.6%
3kh8B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 37.0 3.19e-01 73.2% 91.6%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 38.0 3.91e-01 78.4% 93.7%
3b8lA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 42.0 3.72e-01 88.7% 77.3%
3ejvA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 41.0 3.48e-01 84.5% 78.6%
1fx3B00 3.10.420.10 Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like 0.51 38.0 3.41e-01 80.4% 65.8%
3zpmA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.51 42.0 3.41e-01 93.8% 72.0%
2bmoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 41.0 3.38e-01 90.7% 70.1%
2jmuA01 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.50 42.0 3.29e-01 91.8% 89.2%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1694959 5084.5.1.9 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_O_P 0.89 84.0 5.32e-01 100.0% 91.1%
3970016 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.86 82.0 5.28e-01 100.0% 92.1%
4113659 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.85 80.0 5.20e-01 100.0% 94.1%
4339571 5084.5.4.0 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein 0.82 63.0 3.99e-01 80.4% 20.3%
3974137 5084.5.1.69 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › B-barrel_PelB_C 0.81 63.0 4.24e-01 80.4% 33.3%
4219386 5084.5.1.1 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.81 76.0 4.94e-01 100.0% 93.2%
3933957 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.80 61.0 5.11e-01 80.4% 52.5%
4873102 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.79 53.0 4.72e-01 80.4% 50.8%
4458963 5084.5.1.1 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.79 74.0 4.88e-01 100.0% 91.5%
1806543 5084.5.1.15 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PgaA_barrel 0.77 71.0 4.94e-01 99.0% 95.9%
4318781 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.76 70.0 4.77e-01 100.0% 89.3%
3977722 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.75 70.0 5.34e-01 100.0% 97.1%
4184524 5084.5.1.18 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C 0.75 54.0 3.65e-01 80.4% 21.5%
4010029 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.75 69.0 4.78e-01 100.0% 84.9%
4603160 5084.5.4.4 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › YaiO 0.75 68.0 5.02e-01 97.9% 97.4%
3387368 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.74 69.0 4.91e-01 100.0% 93.6%
4265077 5084.1.1.34 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2715 0.74 69.0 5.70e-01 99.0% 96.2%
3839880 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.74 56.0 3.40e-01 80.4% 27.7%
4305692 5084.1.1.34 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2715 0.73 69.0 5.59e-01 100.0% 95.9%
4345340 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.73 67.0 4.66e-01 100.0% 89.6%
885 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.72 67.0 4.73e-01 100.0% 86.4%
3385673 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.72 68.0 5.62e-01 100.0% 88.7%
3165307 5084.5.4.1 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X 0.72 66.0 4.26e-01 100.0% 89.9%
4421608 5084.1.1.35 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Surface_Ag_2 0.72 66.0 4.88e-01 99.0% 97.4%
4537321 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.72 67.0 5.36e-01 100.0% 87.8%
4285298 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.72 67.0 5.25e-01 100.0% 92.6%
4038477 5084.3.1.3 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 0.72 54.0 3.77e-01 80.4% 43.2%
3164124 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.71 54.0 5.03e-01 79.4% 72.5%
4480962 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.71 61.0 4.20e-01 90.7% 67.0%
3975660 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.71 66.0 5.00e-01 100.0% 97.7%
4042627 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.70 65.0 5.34e-01 100.0% 95.8%
3975352 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.70 65.0 5.49e-01 100.0% 94.8%
3838163 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.69 62.0 3.80e-01 97.9% 97.8%
4099548 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.69 63.0 5.40e-01 99.0% 96.0%
4283551 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.69 64.0 4.89e-01 100.0% 86.2%
3970312 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.68 63.0 5.05e-01 100.0% 95.0%
4116729 5084.1.1.6 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OprF 0.68 63.0 5.12e-01 100.0% 87.1%
4299005 5084.1.1.21 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TSA 0.67 60.0 4.80e-01 99.0% 82.6%
4512746 5084.1.1.9 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagL 0.67 62.0 5.17e-01 100.0% 91.1%
4278291 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.65 54.0 3.79e-01 91.8% 75.1%
3838722 5084.3.1.3 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 0.64 59.0 4.05e-01 100.0% 79.9%
3789272 222.1.1.20 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MFE-2_hydrat-2_N 0.64 41.0 3.56e-01 100.0% 42.0%
3290197 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.62 48.0 3.63e-01 80.4% 59.1%
4286606 222.1.1.17 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.62 47.0 4.05e-01 80.4% 84.7%
6057 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.60 43.0 3.86e-01 74.2% 85.9%
3277737 222.1.1.24 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › AfsA 0.60 46.0 3.83e-01 80.4% 78.1%
5057736 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.60 48.0 4.33e-01 86.6% 93.3%
4125649 222.1.1.12 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.59 46.0 3.64e-01 80.4% 65.9%
5037172 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 49.0 4.17e-01 92.8% 98.8%
3599546 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.57 41.0 3.47e-01 75.3% 74.5%
4016943 222.1.1.12 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.57 50.0 3.97e-01 94.8% 91.6%
3672099 222.1.1.2 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl-ACP_TE 0.55 42.0 3.35e-01 80.4% 75.9%
3581448 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 40.0 3.83e-01 79.4% 70.4%
D2 medium residues 50-128_143-165
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00267.28 best Porin_1 43.2 5.10e-11 86.3% 19.6%
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e54A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.87 83.0 5.58e-01 100.0% 37.5%
3vy8X00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.85 81.0 5.38e-01 100.0% 33.1%
1bt9A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.84 79.0 5.32e-01 100.0% 35.0%
6eheA01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.80 76.0 5.24e-01 100.0% 35.1%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.75 69.0 4.91e-01 100.0% 41.5%
4fqeA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.68 53.0 4.45e-01 99.0% 50.0%
4frxA01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.66 60.0 4.02e-01 100.0% 30.5%
3blzA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 36.0 3.36e-01 78.4% 43.5%
2pzhA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.65 36.0 3.29e-01 91.2% 40.3%
2zylA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.65 53.0 4.08e-01 97.1% 40.6%
2gvhB02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.65 34.0 3.26e-01 90.2% 42.7%
1yliB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 35.0 3.13e-01 92.2% 38.5%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 34.0 3.18e-01 78.4% 43.6%
3f14A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 33.0 3.21e-01 78.4% 50.0%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 34.0 3.23e-01 80.4% 50.0%
1h6eA02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.56 37.0 3.70e-01 97.1% 64.8%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 33.0 3.12e-01 78.4% 47.2%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 41.0 3.64e-01 98.0% 54.1%
1fx3B00 3.10.420.10 Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like 0.55 38.0 3.37e-01 71.6% 65.1%
4en2A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.55 36.0 3.66e-01 97.1% 66.3%
3n54B01 6.20.190.10 Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1 0.54 31.0 3.77e-01 97.1% 91.8%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.54 33.0 3.28e-01 79.4% 55.0%
3f9sB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 35.0 3.19e-01 79.4% 47.5%
5u81A01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.53 40.0 2.94e-01 78.4% 96.5%
3kkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 34.0 3.05e-01 78.4% 45.8%
4lgqA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 34.0 3.18e-01 79.4% 50.4%
3ehcB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 34.0 3.21e-01 79.4% 52.3%
3fsdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 32.0 3.06e-01 78.4% 52.1%
2wraA00 2.60.120.400 Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin 0.51 27.0 2.61e-01 85.3% 40.2%
3pgbA03 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 35.0 3.39e-01 99.0% 63.8%
1aq3A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.50 38.0 3.52e-01 80.4% 83.7%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4113659 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.88 84.0 5.46e-01 100.0% 32.3%
890 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.87 83.0 5.58e-01 100.0% 37.6%
4522601 5084.5.1.1 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.86 82.0 5.39e-01 100.0% 33.9%
4219386 5084.5.1.1 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.86 81.0 5.35e-01 100.0% 32.9%
4539531 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.82 77.0 5.12e-01 100.0% 33.5%
5021263 3414.1.1.13 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.74 35.0 3.30e-01 91.2% 37.6%
3608121 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.73 55.0 3.97e-01 100.0% 29.9%
5002447 3414.1.1.13 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.73 35.0 3.68e-01 91.2% 49.5%
4635523 331.3.1.20 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.71 60.0 4.38e-01 100.0% 35.7%
3706756 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.71 53.0 3.84e-01 100.0% 29.1%
3071075 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.68 56.0 3.94e-01 100.0% 28.5%
3386218 5084.5.1.21 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DUF3373 0.65 57.0 3.87e-01 100.0% 31.5%
3739446 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.65 40.0 4.11e-01 78.4% 65.3%
3283330 331.3.1.20 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.65 52.0 3.88e-01 97.1% 34.5%
3840092 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.64 58.0 3.96e-01 100.0% 31.8%
3690068 11.1.5.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.59 40.0 3.77e-01 97.1% 57.5%
4965521 3414.1.1.13 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.59 31.0 3.07e-01 93.1% 44.5%
3378988 11.1.5.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.57 39.0 3.81e-01 94.1% 64.5%
3602292 504.1.1.0 a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.57 38.0 3.91e-01 79.4% 72.6%
4950394 3414.1.1.13 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.57 29.0 2.96e-01 91.2% 44.8%
1318111 11.1.5.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.56 37.0 3.57e-01 97.1% 58.1%
5070871 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 40.0 3.82e-01 75.5% 94.2%
3782121 3435.1.1.2 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-N 0.54 44.0 3.85e-01 98.0% 57.2%
3936015 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.54 39.0 2.94e-01 94.1% 30.3%
3740164 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 37.0 3.58e-01 70.6% 99.1%
3749143 243.3.1.20 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › AKAP28 0.54 38.0 3.65e-01 99.0% 61.6%
3764790 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 35.0 3.62e-01 78.4% 70.5%
4981222 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 39.0 3.60e-01 76.5% 94.6%
137314 243.1.1.10 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL 0.53 34.0 3.05e-01 78.4% 45.8%
4188109 5084.5.1.10 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 0.53 47.0 3.36e-01 100.0% 38.4%
4222625 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.53 42.0 3.36e-01 91.2% 98.3%
3830579 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.52 44.0 3.35e-01 93.1% 42.9%
3729993 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.51 35.0 3.22e-01 78.4% 53.8%
3843944 243.5.1.7 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › AKAP28 0.51 37.0 3.51e-01 100.0% 62.4%
3690324 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.51 34.0 3.13e-01 78.4% 50.0%
D3 medium residues 129-142_166-290
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1lshA03 2.20.50.20 Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 0.67 42.0 4.97e-01 74.1% 89.8%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.66 40.0 3.92e-01 91.4% 55.8%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.63 37.0 3.69e-01 91.4% 55.2%
3f7xA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 39.0 4.03e-01 96.4% 65.4%
3fgyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 36.0 3.67e-01 97.1% 58.5%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.60 40.0 3.83e-01 92.1% 58.7%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.60 43.0 4.01e-01 91.4% 59.8%
3jtyB01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.53 50.0 3.56e-01 100.0% 58.6%
4ccvA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 33.0 3.60e-01 75.5% 76.5%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.52 40.0 4.11e-01 95.7% 84.7%
4dkkA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 28.0 3.55e-01 96.4% 98.6%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3227628 5087.3.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht 0.57 47.0 3.50e-01 87.1% 58.2%
3764790 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 33.0 3.90e-01 77.7% 90.5%
4421608 5084.1.1.35 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Surface_Ag_2 0.53 49.0 4.06e-01 100.0% 94.0%