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CAKLQF020000010.1__CAH1085019.1__SAMEA5780031_02132__00077
Bact-VirCAKLQF020000010.1__CAH1085019.1__SAMEA5780031_02132__00077
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 99-230_415-469
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02667.21 best | SCFA_trans | 48.5 | 9.70e-13 | 70.0% | 28.0% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hs5A02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.54 | 31.0 | 3.60e-01 | 78.6% | 75.0% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 32.0 | 3.99e-01 | 97.3% | 97.3% |
| 4bejB02 | 1.20.120.1240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain | 0.52 | 44.0 | 4.19e-01 | 89.8% | 85.7% |
| 5tj5E00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.52 | 35.0 | 3.97e-01 | 93.0% | 91.3% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.52 | 40.0 | 3.70e-01 | 98.4% | 62.1% |
| 7yu4A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 37.0 | 3.31e-01 | 89.3% | 52.9% |
| 3kyiA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.51 | 34.0 | 4.01e-01 | 98.9% | 99.2% |
| 3x3bA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.50 | 36.0 | 3.18e-01 | 89.8% | 49.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3278891 | 3355.1.1.5 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › SCFA_trans | 0.99 | 96.0 | 6.81e-01 | 98.4% | 80.9% |
| 5006426 | 3355.1.1.5 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › SCFA_trans | 0.94 | 87.0 | 6.19e-01 | 95.7% | 79.4% |
| None | — | 0.92 | 85.0 | 6.13e-01 | 94.7% | 80.9% | |
| 4965432 | 3355.1.1.5 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › SCFA_trans | 0.90 | 85.0 | 6.03e-01 | 96.3% | 79.8% |
| 4140252 | 3355.1.1.8 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Na_H_antiporter | 0.70 | 63.0 | 4.76e-01 | 96.3% | 82.4% |
| 3591004 | 3355.1.1.8 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Na_H_antiporter | 0.69 | 62.0 | 4.63e-01 | 96.8% | 77.8% |
| 3896408 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.56 | 40.0 | 3.52e-01 | 71.7% | 70.2% |
| 3444036 | 601.1.1.91 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF1218 | 0.53 | 28.0 | 3.32e-01 | 74.9% | 74.4% |
| 5061345 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.51 | 42.0 | 4.10e-01 | 98.9% | 79.0% |
| 5073298 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.50 | 42.0 | 4.11e-01 | 98.4% | 81.5% |
D2
medium
residues 278-414
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02667.21 best | SCFA_trans | 108.8 | 5.00e-31 | 98.5% | 28.3% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pivA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.56 | 30.0 | 2.90e-01 | 99.3% | 42.9% |
| 4xaxB02 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.56 | 32.0 | 3.64e-01 | 70.1% | 74.7% |
| 2jbyA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.55 | 41.0 | 4.22e-01 | 100.0% | 82.7% |
| 2dg7A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 39.0 | 3.56e-01 | 75.2% | 73.1% |
| 2i39B00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.52 | 37.0 | 3.99e-01 | 96.4% | 86.6% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3278891 | 3355.1.1.5 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › SCFA_trans | 0.99 | 97.0 | 6.36e-01 | 100.0% | 30.1% |
| 5006426 | 3355.1.1.5 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › SCFA_trans | 0.94 | 91.0 | 5.97e-01 | 100.0% | 29.3% |
| 4965432 | 3355.1.1.5 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › SCFA_trans | 0.81 | 75.0 | 5.08e-01 | 100.0% | 58.1% |
| None | — | 0.80 | 75.0 | 5.11e-01 | 100.0% | 37.4% | |
| 4033812 | 3355.1.1.8 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Na_H_antiporter | 0.78 | 72.0 | 4.95e-01 | 100.0% | 31.2% |
| 3166088 | 3355.1.1.5 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › SCFA_trans | 0.77 | 72.0 | 4.90e-01 | 100.0% | 31.1% |
| 5078663 | 3355.1.1.8 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Na_H_antiporter | 0.76 | 70.0 | 4.85e-01 | 100.0% | 56.4% |
| 4994403 | 109.3.1.480 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Na_H_antiporter | 0.76 | 55.0 | 5.38e-01 | 73.7% | 70.3% |
| 4238771 | 3355.1.1.8 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Na_H_antiporter | 0.75 | 70.0 | 4.76e-01 | 100.0% | 31.2% |
| 4140252 | 3355.1.1.8 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Na_H_antiporter | 0.75 | 67.0 | 4.69e-01 | 100.0% | 31.3% |
| 4959752 | 3355.1.1.14 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Lactate_perm | 0.72 | 67.0 | 4.47e-01 | 100.0% | 27.9% |
| 3679085 | 3355.1.1.1 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Na_sulph_symp | 0.69 | 63.0 | 4.34e-01 | 100.0% | 44.3% |
| 3291603 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.59 | 45.0 | 3.65e-01 | 79.6% | 78.9% |
| 3948493 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 39.0 | 3.46e-01 | 77.4% | 64.9% |
| 3697137 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.51 | 36.0 | 3.06e-01 | 73.0% | 60.5% |