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CAKLQF020000010.1__CAH1085093.1__SAMEA5780031_02177__00122

Bact-Vir

CAKLQF020000010.1__CAH1085093.1__SAMEA5780031_02177__00122

Identity

Kingdom:
phage

Quality

71.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-58
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.67 40.0 3.00e-01 79.3% 25.0%
6j5tB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 45.0 3.62e-01 77.6% 59.2%
5lohB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 39.0 3.71e-01 100.0% 51.4%
1nrkA01 3.30.70.1630 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 41.0 3.51e-01 100.0% 49.5%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.54 47.0 4.27e-01 98.3% 87.2%
2hhiA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.53 39.0 3.17e-01 81.0% 93.2%
6yiiA01 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.53 37.0 2.54e-01 75.9% 67.1%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.53 38.0 3.51e-01 77.6% 84.4%
4joiC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 38.0 3.03e-01 77.6% 51.7%
1cksB00 3.30.170.10 Alpha Beta › 2-Layer Sandwich › Cyclin-Dependent Kinase Subunit Type 2 › Cyclin-dependent kinase, regulatory subunit 0.52 32.0 3.00e-01 87.9% 44.9%
4ui7C00 6.20.320.10 Special › Other non-globular › YefM-like fold › 0.52 33.0 3.54e-01 86.2% 78.7%
5ksoA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 42.0 3.13e-01 94.8% 84.3%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 39.0 3.33e-01 81.0% 67.4%
1mpgA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.51 37.0 3.08e-01 98.3% 42.0%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3976834 4.1.1.156 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2158 0.66 34.0 3.69e-01 74.1% 56.0%
3781210 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.64 49.0 3.30e-01 87.9% 71.8%
3577497 389.1.1.17 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › FXa_inhibition 0.62 36.0 2.71e-01 77.6% 22.9%
4989084 284.4.1.0 ↗ a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.59 44.0 4.40e-01 87.9% 81.7%
3496898 7579.1.1.42 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 0.56 47.0 3.04e-01 96.6% 65.8%
3672744 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.56 48.0 3.30e-01 100.0% 78.7%
3265666 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 41.0 2.34e-01 77.6% 9.3%
3867672 2.1.1.22 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN 0.56 40.0 3.81e-01 87.9% 64.7%
3619859 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 38.0 3.11e-01 74.1% 95.8%
4939072 205.1.1.16 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.54 38.0 2.92e-01 75.9% 49.7%
2718212 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.53 40.0 3.69e-01 98.3% 63.0%
3587125 4967.1.1.0 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.53 44.0 3.28e-01 96.6% 91.3%
4361334 2.4.1.3 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.53 42.0 3.22e-01 98.3% 40.0%
4349584 2.1.1.127 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.53 39.0 3.01e-01 79.3% 48.8%
3590189 4967.1.1.0 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.52 43.0 3.22e-01 96.6% 83.7%
5020098 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.52 41.0 3.90e-01 98.3% 71.4%
3965386 2.4.1.6 ↗ beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.52 40.0 3.18e-01 98.3% 41.5%
4390303 5.1.3.238 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 0.51 44.0 2.54e-01 96.6% 49.4%
3989890 4958.1.1.0 ↗ a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit 0.51 39.0 3.80e-01 82.8% 78.5%
4928279 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.51 39.0 3.59e-01 98.3% 64.0%
3819021 2003.1.5.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.50 37.0 2.49e-01 82.8% 74.6%