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CAKLQF020000011.1__CAH1086039.1__SAMEA5780031_02286__00086

Bact-Vir

CAKLQF020000011.1__CAH1086039.1__SAMEA5780031_02286__00086

Identity

Kingdom:
phage

Quality

74.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-97
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00313.29 best CSD 44.0 2.30e-11 65.0% 95.5%
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lssA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.88 60.0 7.06e-01 70.1% 100.0%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.84 62.0 7.03e-01 81.4% 100.0%
3trzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.83 60.0 6.31e-01 74.2% 93.1%
1wfqA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.82 59.0 6.79e-01 75.3% 98.6%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 52.0 6.21e-01 71.1% 100.0%
2c35B02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.79 54.0 5.59e-01 70.1% 100.0%
3aqqA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 64.0 6.40e-01 86.6% 84.8%
2ytyA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 55.0 5.81e-01 74.2% 84.1%
1go3E01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 56.0 5.74e-01 76.3% 100.0%
2cqoA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 53.0 5.43e-01 71.1% 88.0%
2qcpX01 2.40.50.320 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF 0.76 53.0 5.94e-01 72.2% 100.0%
2id0A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 51.0 5.61e-01 72.2% 85.9%
8aasC01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 53.0 5.21e-01 73.2% 68.6%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 52.0 5.44e-01 72.2% 98.9%
3q8dA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 52.0 5.71e-01 71.1% 100.0%
3mxnB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 53.0 4.81e-01 74.2% 84.0%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 52.0 5.64e-01 73.2% 93.9%
3k0xA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 52.0 5.22e-01 73.2% 84.8%
3kf8B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 52.0 4.88e-01 74.2% 67.5%
6p1hB02 2.40.50.430 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 50.0 4.42e-01 70.1% 77.5%
4rfbA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 50.0 5.55e-01 70.1% 100.0%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 47.0 5.63e-01 73.2% 100.0%
3f8tA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 50.0 5.52e-01 72.2% 100.0%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 52.0 4.53e-01 74.2% 83.0%
3qr8A01 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.72 51.0 5.44e-01 73.2% 90.5%
1pxfA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 51.0 4.84e-01 73.2% 84.7%
3tdqA00 2.40.50.320 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF 0.71 52.0 5.49e-01 76.3% 88.4%
1nnxA00 2.40.50.200 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Bacterial OB-fold 0.71 49.0 5.00e-01 71.1% 95.7%
4da2A01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 48.0 5.26e-01 73.2% 86.1%
4gnxA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 48.0 4.66e-01 73.2% 63.9%
2rdgA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 47.0 5.38e-01 70.1% 100.0%
5i4dA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 46.0 5.11e-01 70.1% 100.0%
1jt8A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 48.0 4.76e-01 74.2% 69.6%
2wfwB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 45.0 5.20e-01 71.1% 98.5%
3amuA02 2.40.50.1010 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 53.0 4.73e-01 83.5% 91.9%
2nttA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 45.0 5.10e-01 70.1% 100.0%
1khiA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 45.0 5.00e-01 72.2% 100.0%
2zxrA01 2.40.50.460 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 45.0 3.87e-01 74.2% 54.4%
3er0A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 42.0 4.74e-01 73.2% 98.6%
3zyyX03 3.10.20.880 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.60 42.0 4.37e-01 71.1% 89.7%
3gveA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.56 40.0 2.77e-01 75.3% 91.9%
3fjyA02 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.55 37.0 3.08e-01 70.1% 100.0%
2chcC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 43.0 3.67e-01 85.6% 93.1%
4i4kA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 37.0 3.37e-01 72.2% 91.3%
3ef8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 37.0 3.21e-01 75.3% 87.8%
3ub1D02 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 34.0 3.29e-01 70.1% 92.1%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027685 2.1.1.3 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD 0.90 63.0 6.93e-01 71.1% 88.7%
3889658 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.86 60.0 7.00e-01 73.2% 98.6%
3613173 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.85 60.0 5.84e-01 73.2% 66.7%
3618947 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.82 57.0 4.77e-01 73.2% 44.5%
4932460 2.1.1.13 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.79 51.0 6.14e-01 70.1% 100.0%
3997789 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.79 55.0 6.42e-01 72.2% 100.0%
167647 2.1.1.3 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD 0.79 56.0 5.98e-01 73.2% 85.7%
3599585 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.79 62.0 5.95e-01 82.5% 90.9%
3227102 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 52.0 6.06e-01 70.1% 94.3%
4429356 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.78 51.0 6.07e-01 74.2% 100.0%
3317544 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.78 51.0 6.09e-01 75.3% 100.0%
4288723 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.78 53.0 5.99e-01 71.1% 100.0%
3356732 2.1.1.67 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 0.77 54.0 5.03e-01 73.2% 79.2%
4043601 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.76 50.0 5.99e-01 71.1% 100.0%
4945673 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 49.0 5.97e-01 70.1% 100.0%
4483173 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.76 49.0 5.90e-01 74.2% 98.5%
3511418 2.1.1.38 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.76 51.0 5.93e-01 71.1% 95.7%
4420797 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 49.0 5.22e-01 70.1% 75.3%
4252940 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.75 49.0 5.81e-01 73.2% 98.5%
3992357 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.75 52.0 4.95e-01 73.2% 60.9%
4039724 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.75 49.0 5.81e-01 73.2% 100.0%
4032291 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.75 48.0 5.71e-01 73.2% 96.9%
4050524 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.75 49.0 5.83e-01 74.2% 100.0%
4176687 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.75 49.0 5.82e-01 75.3% 100.0%
4072975 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.75 52.0 5.65e-01 72.2% 97.5%
3071227 2.1.1.55 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CusF_Ec 0.75 52.0 5.19e-01 72.2% 78.0%
4425795 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.74 49.0 5.84e-01 73.2% 100.0%
5051423 2.1.1.67 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 0.74 52.0 5.14e-01 73.2% 82.9%
3483454 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 52.0 4.77e-01 72.2% 67.7%
4937552 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 53.0 5.17e-01 74.2% 83.7%
3680255 2.1.1.67 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 0.73 50.0 4.84e-01 70.1% 87.2%
137535 2.1.1.59 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1 0.73 52.0 5.07e-01 73.2% 81.0%
3797361 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 53.0 4.84e-01 75.3% 61.6%
3945680 2.1.1.30 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › BOF 0.73 50.0 5.11e-01 71.1% 75.8%
5038005 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 52.0 4.76e-01 74.2% 60.8%
4944053 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 49.0 5.48e-01 70.1% 100.0%
4085660 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.72 51.0 5.53e-01 73.2% 97.5%
4582456 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.72 49.0 5.61e-01 76.3% 97.1%
3471516 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.71 50.0 4.39e-01 73.2% 58.6%
5079140 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 51.0 5.02e-01 74.2% 86.4%
3439083 2.1.1.224 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 0.71 50.0 4.50e-01 75.3% 53.8%
3801549 2.1.1.224 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 0.71 47.0 4.49e-01 70.1% 57.4%
4250117 2.1.1.83 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N 0.71 48.0 5.25e-01 73.2% 85.0%
3508700 2.1.1.224 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 0.71 48.0 4.49e-01 74.2% 56.7%
3799466 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 50.0 5.35e-01 74.2% 85.9%
4220188 2.1.1.224 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 0.70 48.0 4.40e-01 74.2% 54.4%
4271190 2.1.1.24 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.70 51.0 4.50e-01 76.3% 58.6%
3917278 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.70 50.0 4.60e-01 75.3% 71.1%
4962106 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.70 50.0 4.58e-01 74.2% 100.0%
4656043 2.1.1.83 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N 0.70 48.0 5.24e-01 73.2% 86.3%
3790485 2.1.1.224 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 0.70 48.0 4.01e-01 75.3% 40.0%
4991760 2.1.1.83 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N 0.69 48.0 5.08e-01 75.3% 82.4%
5075031 2.1.1.83 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N 0.69 48.0 5.27e-01 74.2% 88.7%
4128017 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 51.0 4.56e-01 78.4% 65.2%
4233469 2.1.1.24 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.68 50.0 4.62e-01 77.3% 62.4%
4058131 2.1.1.83 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N 0.68 48.0 5.26e-01 75.3% 90.0%
3498064 2.1.1.224 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 0.68 48.0 3.97e-01 75.3% 41.8%
4077815 2.1.1.83 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N 0.67 48.0 5.15e-01 74.2% 88.7%
4952161 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 46.0 4.92e-01 71.1% 88.2%
3917843 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.67 48.0 4.36e-01 74.2% 71.3%
3575960 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 47.0 5.21e-01 73.2% 96.0%
4886517 2.1.1.24 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.67 50.0 4.62e-01 79.4% 63.2%
4342936 2.1.1.83 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N 0.66 48.0 4.72e-01 76.3% 91.4%
1273132 2.2.1.1 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Stap_Strp_toxin 0.66 45.0 4.80e-01 71.1% 82.6%
4981994 2.1.1.83 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N 0.66 47.0 5.15e-01 75.3% 96.2%
3964220 2.2.1.0 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins 0.66 47.0 4.93e-01 76.3% 90.0%
5012552 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 49.0 4.92e-01 81.4% 85.0%
3758777 246.2.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases 0.64 49.0 3.21e-01 82.5% 59.1%
4660548 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.58 42.0 4.49e-01 77.3% 97.6%
1178512 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.57 39.0 3.54e-01 70.1% 51.9%
5038808 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.51 46.0 4.09e-01 97.9% 85.2%