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CAKLQF020000011.1__CAH1086069.1__SAMEA5780031_02315__00114

Bact-Vir

CAKLQF020000011.1__CAH1086069.1__SAMEA5780031_02315__00114

Identity

Kingdom:
phage

Quality

96.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 13-29_69-113_140-163
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r0xA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.97 88.0 6.90e-01 93.0% 92.9%
3cb0D00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.96 88.0 6.89e-01 95.3% 92.5%
8ct0B01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.91 79.0 6.15e-01 90.7% 87.3%
5choF00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.88 81.0 6.37e-01 96.5% 93.8%
3pftA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.83 75.0 6.00e-01 96.5% 92.3%
2d37A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.82 73.0 5.92e-01 96.5% 93.5%
4z85A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.81 74.0 5.57e-01 98.8% 84.8%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.67 25.0 3.00e-01 97.7% 47.5%
3ossC00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.66 27.0 3.08e-01 97.7% 47.7%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 26.0 3.04e-01 97.7% 48.3%
3duzA02 2.40.50.710 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 26.0 3.26e-01 97.7% 68.5%
2rk9B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 26.0 2.31e-01 97.7% 30.8%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 26.0 2.97e-01 100.0% 58.5%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4469941 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.98 91.0 6.98e-01 95.3% 89.1%
4125555 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.97 89.0 6.99e-01 94.2% 94.2%
4489896 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.94 89.0 6.73e-01 98.8% 83.9%
1725861 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.81 74.0 5.57e-01 98.8% 84.8%
3519861 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 25.0 2.97e-01 97.7% 46.7%
3522979 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 25.0 3.45e-01 96.5% 68.9%
3933788 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 25.0 2.93e-01 96.5% 46.7%
4783464 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.62 24.0 3.50e-01 95.3% 79.4%
3501557 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.60 26.0 3.24e-01 96.5% 62.0%
3518931 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.59 26.0 3.34e-01 97.7% 66.7%
5042869 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.58 26.0 2.96e-01 96.5% 52.3%
3691965 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 38.0 2.34e-01 75.6% 57.7%
D2 medium residues 30-68_114-139
PDB
Domain cluster: representative
CATH (93)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r0xA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 1.00 97.0 6.93e-01 100.0% 70.5%
4l82A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.98 95.0 6.81e-01 100.0% 69.9%
1rz1A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.98 94.0 6.83e-01 100.0% 69.7%
3cb0D00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.98 94.0 6.71e-01 100.0% 69.6%
4xhyA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.97 93.0 6.63e-01 100.0% 66.5%
2ecuA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.97 92.0 6.75e-01 100.0% 67.1%
1uscA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.97 92.0 6.41e-01 100.0% 61.8%
1i0rA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.97 92.0 6.59e-01 100.0% 70.2%
3bnkA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.96 92.0 6.31e-01 100.0% 60.2%
5choF00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.96 92.0 6.57e-01 100.0% 70.6%
2r6vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.96 91.0 6.48e-01 100.0% 68.3%
8ct0B01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.96 91.0 6.46e-01 100.0% 66.3%
1yoaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.95 90.0 6.52e-01 100.0% 70.4%
3nfwA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.95 89.0 6.24e-01 100.0% 60.3%
2qckA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.95 89.0 6.55e-01 100.0% 70.9%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.94 89.0 6.53e-01 100.0% 69.8%
1ejeA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.94 89.0 6.08e-01 100.0% 59.4%
3bpkA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.92 87.0 6.07e-01 100.0% 67.0%
2d37A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.91 85.0 6.24e-01 100.0% 69.0%
3pftA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.91 85.0 6.23e-01 100.0% 69.2%
3e4vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.89 83.0 5.88e-01 100.0% 65.5%
3hmzA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.88 83.0 5.72e-01 100.0% 60.7%
2d5mA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.88 82.0 5.76e-01 100.0% 60.7%
3b5mA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.83 75.0 6.07e-01 100.0% 81.5%
2nr4A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.81 74.0 5.73e-01 100.0% 75.9%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.75 69.0 5.68e-01 100.0% 68.5%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.74 62.0 5.86e-01 92.3% 83.5%
1yxsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.72 63.0 5.59e-01 95.4% 84.8%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.71 62.0 5.09e-01 100.0% 68.0%
3fxzA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.71 58.0 5.05e-01 89.2% 68.4%
2nwaA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.71 64.0 6.10e-01 100.0% 90.7%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 62.0 5.39e-01 95.4% 70.8%
2e8yA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 62.0 5.33e-01 96.9% 67.3%
1u5qA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.70 58.0 5.11e-01 90.8% 74.0%
1j5uA01 3.55.10.10 Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain 0.70 51.0 4.18e-01 76.9% 45.3%
1zysA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 60.0 5.33e-01 96.9% 78.9%
6bg2A02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 60.0 4.84e-01 96.9% 60.8%
4c0tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 60.0 5.34e-01 96.9% 82.6%
2ey4D00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.68 58.0 5.52e-01 100.0% 81.3%
4eqmA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.68 54.0 4.91e-01 87.7% 80.9%
4m1xD00 3.30.1360.240 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.68 56.0 5.46e-01 95.4% 83.3%
5jzjA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 56.0 4.95e-01 90.8% 73.4%
3nynA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 58.0 4.43e-01 95.4% 49.7%
2vz6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 54.0 5.04e-01 89.2% 84.3%
2acxA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 58.0 5.21e-01 96.9% 82.4%
3uc4A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 53.0 4.86e-01 87.7% 75.3%
5ajqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 53.0 4.91e-01 89.2% 74.4%
4wnoA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 54.0 4.93e-01 90.8% 80.5%
4af3A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 55.0 5.04e-01 93.8% 80.7%
4redB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 53.0 4.92e-01 89.2% 83.3%
3gniB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 56.0 5.11e-01 96.9% 84.3%
2nwuB01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.65 49.0 3.94e-01 80.0% 42.9%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 56.0 5.19e-01 96.9% 90.2%
3zduA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 55.0 5.30e-01 95.4% 84.2%
3kewB02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.65 56.0 4.34e-01 96.9% 84.0%
4azsA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 53.0 4.99e-01 92.3% 93.8%
3dlsB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 53.0 4.68e-01 92.3% 71.4%
3uimA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 52.0 4.72e-01 90.8% 70.8%
2clqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 54.0 4.96e-01 95.4% 77.6%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 46.0 4.39e-01 78.5% 68.4%
3szeA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.64 54.0 3.51e-01 98.5% 23.4%
3w1eA01 3.30.1660.40 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › FlgT, N-terminal domain 0.64 46.0 4.20e-01 78.5% 95.6%
8gccA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.63 54.0 4.98e-01 96.9% 75.6%
1a1xA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.62 54.0 4.62e-01 98.5% 90.6%
5hl8C00 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.62 52.0 4.90e-01 95.4% 79.7%
3f56A01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.62 54.0 4.63e-01 100.0% 84.0%
2c9aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 52.0 4.63e-01 96.9% 73.2%
5xd6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 50.0 4.46e-01 90.8% 70.2%
2z7rA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 54.0 4.93e-01 96.9% 78.6%
3axsA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 52.0 3.33e-01 95.4% 28.9%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 45.0 4.11e-01 78.5% 63.5%
2esrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 49.0 3.70e-01 89.2% 83.1%
3qwuA03 3.30.70.2160 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 46.0 3.68e-01 84.6% 46.0%
2weiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 52.0 4.70e-01 98.5% 81.1%
2c47A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 48.0 4.68e-01 90.8% 89.0%
5lt5A02 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.60 50.0 4.41e-01 96.9% 82.4%
4fg9A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 49.0 4.64e-01 90.8% 75.9%
2l8kA00 3.30.1330.220 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Arterivirus nonstructural protein 7 alpha 0.59 51.0 4.16e-01 96.9% 76.4%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 45.0 4.22e-01 84.6% 69.5%
3u2gA02 2.60.98.40 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain 0.59 44.0 3.58e-01 81.5% 78.3%
5hesA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 48.0 4.50e-01 92.3% 74.1%
1jsgA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.58 49.0 4.17e-01 96.9% 87.4%
2pa8D01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.58 49.0 4.49e-01 95.4% 71.6%
6aieA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 47.0 3.39e-01 95.4% 32.4%
2ra1A04 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 46.0 4.19e-01 96.9% 74.2%
3grzB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 47.0 3.39e-01 93.8% 32.1%
7vkkB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 46.0 3.17e-01 90.8% 57.6%
1s9iB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 47.0 4.22e-01 95.4% 76.3%
3lwsF02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 46.0 4.03e-01 98.5% 68.3%
4a9cA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.54 45.0 2.98e-01 95.4% 28.0%
3zpgA02 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.53 46.0 3.18e-01 95.4% 90.3%
1vdrA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.52 44.0 3.35e-01 95.4% 94.3%
4ha7B00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.51 44.0 3.11e-01 96.9% 84.4%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4489896 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 1.00 97.0 6.65e-01 100.0% 61.1%
4469941 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 1.00 97.0 6.80e-01 100.0% 66.7%
3964364 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.98 94.0 6.66e-01 100.0% 67.9%
4600482 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.98 94.0 6.65e-01 100.0% 64.2%
4986653 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.98 93.0 6.48e-01 100.0% 63.7%
4322066 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.98 94.0 6.57e-01 100.0% 62.9%
4233298 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.97 93.0 6.52e-01 100.0% 63.5%
5044905 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.97 92.0 6.45e-01 100.0% 65.1%
70 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.97 92.0 6.41e-01 100.0% 61.8%
1217791 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.96 92.0 6.45e-01 100.0% 62.0%
1844144 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.96 92.0 6.51e-01 100.0% 68.5%
72 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.96 91.0 6.57e-01 100.0% 70.4%
5059425 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.96 91.0 6.34e-01 100.0% 63.3%
4348615 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.96 91.0 6.26e-01 100.0% 58.4%
3026889 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.96 91.0 6.34e-01 100.0% 61.8%
5001009 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.96 91.0 6.31e-01 100.0% 63.3%
4954766 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.95 90.0 6.36e-01 100.0% 65.9%
4496885 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.95 90.0 6.16e-01 100.0% 60.5%
5043252 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.94 89.0 6.26e-01 100.0% 65.1%
3279401 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.92 87.0 6.21e-01 100.0% 65.5%
300370 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.91 85.0 6.24e-01 100.0% 68.6%
3959626 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.91 84.0 6.06e-01 100.0% 65.5%
4930864 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.90 83.0 5.85e-01 100.0% 63.3%
4132799 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.89 84.0 6.07e-01 100.0% 68.1%
3611250 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.78 70.0 5.40e-01 100.0% 80.7%
None 0.74 58.0 3.84e-01 83.1% 45.8%
3581082 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.73 64.0 4.58e-01 96.9% 67.6%
4214150 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.70 63.0 5.23e-01 100.0% 60.9%
3214903 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.69 60.0 3.73e-01 96.9% 31.9%
4665306 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.68 60.0 4.04e-01 100.0% 67.8%
1320675 304.157.1.1 a+b two layers › Alpha-beta plaits › uncharacterized protein 201phi2-1p060 › uncharacterized protein 201phi2-1p060 › DUF6837 0.67 56.0 5.45e-01 95.4% 82.2%
3285931 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 57.0 4.71e-01 93.8% 59.1%
4091857 310.3.1.4 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › GspL_C 0.67 56.0 4.48e-01 93.8% 49.2%
4234924 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.67 56.0 4.88e-01 93.8% 73.0%
3659065 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.66 56.0 4.86e-01 93.8% 80.0%
5016099 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 49.0 4.95e-01 78.5% 78.5%
3807910 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.66 56.0 5.29e-01 95.4% 80.0%
3332958 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.66 55.0 5.38e-01 92.3% 90.0%
3825541 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.66 55.0 4.66e-01 93.8% 68.2%
3315331 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.66 55.0 5.13e-01 92.3% 83.7%
3807253 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.65 55.0 5.17e-01 93.8% 81.2%
3802901 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 53.0 5.11e-01 90.8% 82.7%
3462522 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 55.0 4.45e-01 93.8% 60.0%
4277035 310.3.1.4 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › GspL_C 0.65 55.0 5.19e-01 96.9% 82.5%
4616161 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.65 54.0 4.66e-01 93.8% 69.5%
4656385 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.65 54.0 5.00e-01 93.8% 84.7%
3832697 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.65 55.0 4.89e-01 95.4% 72.6%
3367405 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.65 55.0 4.66e-01 95.4% 73.6%
3452017 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 54.0 5.05e-01 92.3% 83.7%
5042991 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.65 47.0 4.56e-01 78.5% 70.7%
3308868 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 55.0 4.70e-01 95.4% 83.8%
3438815 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.65 56.0 5.17e-01 98.5% 88.2%
3357746 304.12.1.8 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › bHLH-TF_ACT-like_plant 0.65 48.0 4.74e-01 80.0% 81.4%
3822351 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.65 54.0 4.80e-01 93.8% 73.7%
None 0.64 54.0 4.66e-01 95.4% 61.9%
4545902 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 54.0 4.91e-01 95.4% 80.0%
3639815 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.64 48.0 3.53e-01 80.0% 29.7%
4958319 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.64 53.0 4.08e-01 95.4% 95.0%
4009838 310.3.1.4 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › GspL_C 0.64 55.0 5.15e-01 95.4% 80.0%
4248471 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.64 54.0 4.91e-01 95.4% 81.1%
3817811 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 54.0 5.01e-01 95.4% 77.6%
3671608 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 54.0 4.63e-01 96.9% 66.4%
3427288 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 52.0 4.34e-01 92.3% 78.3%
4986600 304.8.1.12 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 0.64 48.0 3.95e-01 81.5% 45.0%
3367362 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.64 54.0 5.12e-01 96.9% 80.0%
3824912 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.64 52.0 4.92e-01 92.3% 80.0%
3837690 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.63 47.0 4.53e-01 80.0% 82.7%
3675774 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.63 52.0 4.81e-01 92.3% 78.8%
3369744 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 52.0 4.36e-01 92.3% 74.8%
3702916 5104.1.1.3 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 0.63 54.0 4.19e-01 96.9% 78.0%
3667551 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 52.0 4.74e-01 92.3% 67.8%
3464409 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 50.0 4.83e-01 87.7% 85.3%
4429744 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.63 52.0 4.70e-01 95.4% 75.8%
3367922 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.63 53.0 4.69e-01 93.8% 69.5%
3456962 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.63 52.0 4.86e-01 93.8% 79.8%
4597943 2.21.1.0 beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.63 46.0 3.54e-01 76.9% 72.4%
3439107 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.63 46.0 4.42e-01 78.5% 80.0%
4298844 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 53.0 4.75e-01 96.9% 72.6%
3451456 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.62 52.0 4.63e-01 93.8% 81.1%
4030184 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.62 54.0 3.67e-01 100.0% 36.2%
4601389 2.21.1.1 beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB 0.62 45.0 3.48e-01 76.9% 72.3%
3341034 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.62 51.0 4.37e-01 93.8% 63.6%
3831627 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.62 51.0 4.85e-01 93.8% 78.8%
3804630 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 53.0 4.40e-01 100.0% 82.4%
3303164 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 47.0 4.73e-01 81.5% 86.2%
3307398 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.62 51.0 4.32e-01 92.3% 76.4%
3314483 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.62 50.0 4.28e-01 93.8% 63.5%
3818197 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 49.0 4.69e-01 87.7% 82.7%
3816023 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.61 49.0 4.68e-01 90.8% 80.0%
3367441 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 51.0 4.48e-01 93.8% 70.7%
3377982 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.61 50.0 4.51e-01 90.8% 73.3%
3348806 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.61 44.0 4.27e-01 78.5% 76.0%
3981894 304.8.1.25 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF5609 0.61 44.0 4.47e-01 80.0% 76.9%
3325750 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.61 49.0 4.63e-01 90.8% 85.0%
3679423 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 43.0 4.19e-01 78.5% 85.3%
3517652 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.58 49.0 3.12e-01 93.8% 19.1%
3474071 206.1.2.3 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › IPK 0.55 45.0 3.03e-01 95.4% 75.0%
5000629 3110.1.1.2 a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3-PglB_core 0.53 43.0 3.31e-01 92.3% 98.8%