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CAKLQF020000012.1__CAH1086304.1__SAMEA5780031_02345__00011

Bact-Vir

CAKLQF020000012.1__CAH1086304.1__SAMEA5780031_02345__00011

Identity

Kingdom:
phage

Quality

90.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 25-42_156-255
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13557.13 best Phenol_MetA_deg 31.8 2.20e-07 97.5% 46.3%
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4meeA00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.83 75.0 5.39e-01 95.8% 93.1%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.81 74.0 5.57e-01 98.3% 99.3%
2f1cX00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.80 68.0 5.19e-01 89.0% 88.5%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.80 73.0 5.42e-01 97.5% 92.8%
3eniC00 2.50.10.10 Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A 0.80 64.0 4.48e-01 84.7% 50.3%
1t16A00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.79 74.0 4.93e-01 100.0% 96.5%
2vdfA00 2.40.128.100 Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin 0.78 73.0 5.72e-01 98.3% 99.6%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.77 68.0 4.92e-01 93.2% 94.1%
4fqeA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.77 73.0 6.35e-01 100.0% 99.4%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.76 70.0 4.72e-01 99.2% 98.3%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.76 67.0 5.13e-01 92.4% 88.8%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.76 71.0 5.78e-01 100.0% 83.4%
6wimA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.75 66.0 4.62e-01 94.9% 97.0%
6eheA01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.75 69.0 5.00e-01 97.5% 69.9%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.75 70.0 4.99e-01 98.3% 55.7%
1e54A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.75 69.0 4.93e-01 99.2% 90.0%
5dl5A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.75 65.0 4.34e-01 91.5% 45.4%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.75 37.0 5.15e-01 100.0% 95.0%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.74 57.0 5.15e-01 80.5% 75.5%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.73 68.0 4.96e-01 100.0% 100.0%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.72 62.0 4.11e-01 90.7% 42.4%
4k3bA06 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.72 62.0 4.29e-01 91.5% 81.8%
3jtyB01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.70 60.0 4.13e-01 91.5% 53.3%
3vy8X00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.70 64.0 4.56e-01 100.0% 69.8%
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.69 59.0 3.95e-01 90.7% 31.4%
5fokA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.69 58.0 3.76e-01 91.5% 42.9%
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.68 58.0 3.71e-01 89.8% 37.6%
5dl7A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.68 61.0 4.11e-01 95.8% 69.4%
6i7sG01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.67 50.0 3.86e-01 78.0% 52.3%
2hdiA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.67 56.0 3.65e-01 88.1% 36.9%
2porA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.66 61.0 4.50e-01 100.0% 73.1%
3sybA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.66 61.0 4.14e-01 100.0% 77.0%
1lshA03 2.20.50.20 Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 0.65 46.0 5.07e-01 72.9% 92.9%
7x7zA01 2.40.480.10 Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like 0.65 57.0 5.35e-01 92.4% 82.7%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.65 58.0 4.60e-01 100.0% 80.8%
3h4zB03 3.15.10.50 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › 0.64 49.0 4.22e-01 81.4% 83.8%
3e1eC00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 49.0 4.60e-01 79.7% 95.7%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.64 57.0 4.73e-01 97.5% 91.7%
2q03A00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.64 56.0 5.35e-01 94.1% 84.2%
6r3wA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 58.0 5.19e-01 100.0% 92.5%
3rd6A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 58.0 5.45e-01 100.0% 84.7%
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.63 58.0 5.05e-01 99.2% 97.7%
6x1kA01 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.63 54.0 5.53e-01 99.2% 97.4%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.62 57.0 5.16e-01 99.2% 96.8%
6dnzA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.62 46.0 4.04e-01 78.8% 100.0%
7vu0A01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.62 56.0 3.75e-01 98.3% 63.2%
3f1tB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 47.0 4.52e-01 80.5% 100.0%
4bj8K00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.61 54.0 5.38e-01 99.2% 94.2%
3qszA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 55.0 4.83e-01 100.0% 78.5%
1jkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 42.0 4.01e-01 70.3% 97.8%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.59 54.0 4.41e-01 99.2% 96.7%
5e1vB00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.59 45.0 3.38e-01 79.7% 82.8%
1mmuA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 51.0 3.73e-01 100.0% 92.6%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 52.0 4.64e-01 100.0% 77.4%
4k02A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 46.0 4.48e-01 84.7% 100.0%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 49.0 3.67e-01 96.6% 91.7%
2cc3A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.53 44.0 4.13e-01 88.1% 91.0%
3qooA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 40.0 3.81e-01 78.0% 92.5%
2cwzA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 40.0 3.78e-01 79.7% 92.7%
3r87A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 38.0 3.67e-01 75.4% 69.7%
1of5B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 41.0 4.04e-01 87.3% 95.3%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4669999 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.83 75.0 5.44e-01 96.6% 92.1%
3646752 5084.5.1.23 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › TOC159_MAD 0.83 76.0 5.55e-01 96.6% 76.8%
4670451 5084.5.4.9 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › UPF0164 0.83 77.0 5.42e-01 99.2% 84.5%
3964794 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.82 66.0 5.15e-01 84.7% 49.2%
4603160 5084.5.4.4 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › YaiO 0.82 73.0 5.60e-01 92.4% 56.6%
1806543 5084.5.1.15 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PgaA_barrel 0.81 68.0 4.98e-01 88.1% 74.8%
885 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.80 73.0 5.42e-01 97.5% 92.8%
3976425 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.79 75.0 6.06e-01 100.0% 99.5%
3742156 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.79 64.0 4.48e-01 84.7% 35.9%
3968185 5085.1.1.1 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.79 61.0 4.07e-01 81.4% 65.2%
4610039 5084.5.4.9 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › UPF0164 0.79 74.0 5.29e-01 100.0% 67.0%
3980621 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.78 74.0 5.88e-01 100.0% 85.1%
1298172 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.77 74.0 6.35e-01 100.0% 99.4%
3451870 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.77 72.0 5.20e-01 100.0% 62.1%
3781449 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.77 62.0 4.34e-01 84.7% 36.3%
4353229 5084.5.4.0 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein 0.77 71.0 5.21e-01 99.2% 62.1%
4009143 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.76 69.0 4.90e-01 96.6% 93.1%
3405242 5084.5.1.37 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.76 67.0 5.64e-01 91.5% 67.2%
3608121 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.76 62.0 4.69e-01 85.6% 78.0%
3942551 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.76 70.0 4.67e-01 99.2% 98.6%
3968681 5084.5.1.4 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.76 65.0 4.37e-01 91.5% 99.1%
4571005 5084.5.1.66 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DUF2490 0.76 69.0 5.68e-01 97.5% 96.6%
4005087 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.76 71.0 5.56e-01 100.0% 78.5%
890 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.75 70.0 4.96e-01 100.0% 90.6%
3970343 5084.5.1.24 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Gcw_chp 0.75 68.0 5.44e-01 100.0% 52.6%
3385986 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.74 71.0 5.77e-01 100.0% 91.9%
3932438 5084.5.1.33 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel 0.74 65.0 4.92e-01 92.4% 62.7%
4009827 5084.5.1.4 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.73 69.0 4.65e-01 100.0% 99.8%
4873102 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.73 66.0 6.40e-01 98.3% 86.2%
3974058 5084.5.1.28 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › CopB 0.73 67.0 5.50e-01 100.0% 96.7%
3980013 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.73 64.0 4.23e-01 91.5% 38.6%
3971437 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.73 67.0 5.41e-01 100.0% 87.6%
2321077 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.72 66.0 4.75e-01 98.3% 70.5%
3966214 5084.5.1.4 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.72 62.0 4.19e-01 91.5% 47.4%
3404731 5084.5.1.37 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.72 63.0 5.33e-01 91.5% 82.8%
2834683 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.72 60.0 4.11e-01 88.1% 91.9%
3969715 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.72 59.0 3.79e-01 87.3% 100.0%
3966665 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.72 66.0 4.40e-01 99.2% 99.1%
4075543 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.71 66.0 4.80e-01 100.0% 99.0%
3519720 5084.8.1.3 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher_TcfC 0.71 60.0 3.94e-01 89.8% 35.2%
3946102 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.71 61.0 4.02e-01 89.8% 27.1%
3838130 5084.5.1.25 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › HP_OMP_2 0.69 63.0 4.16e-01 98.3% 32.5%
3941401 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.69 62.0 4.29e-01 99.2% 89.4%
3706756 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.69 61.0 4.50e-01 93.2% 45.1%
1734925 5084.5.1.4 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.68 61.0 4.11e-01 95.8% 69.4%
5018057 9.13.1.0 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.67 59.0 5.87e-01 94.1% 90.2%
1716664 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.67 58.0 3.89e-01 91.5% 48.3%
3971813 5084.8.1.0 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore 0.67 59.0 3.96e-01 94.1% 40.0%
888 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.66 61.0 4.50e-01 100.0% 73.1%
3942540 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.66 59.0 3.87e-01 94.9% 40.4%
4928614 9.13.1.0 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.66 58.0 5.63e-01 94.1% 89.1%
3313840 1100.1.1.1 beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein › TIP41 0.66 52.0 3.84e-01 82.2% 43.1%
4928158 9.13.1.0 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.65 58.0 5.57e-01 94.9% 85.0%
4863129 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.65 54.0 5.58e-01 97.5% 94.6%
200662 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.65 54.0 4.53e-01 90.7% 89.9%
3574513 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.64 47.0 3.96e-01 76.3% 53.8%
2716251 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.63 56.0 5.60e-01 99.2% 93.3%
2715752 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.62 54.0 5.38e-01 99.2% 91.1%
4174055 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.62 56.0 4.79e-01 99.2% 97.3%
3385673 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.62 56.0 5.02e-01 99.2% 92.5%
4222629 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.61 54.0 4.98e-01 99.2% 96.1%
3228525 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.61 49.0 5.13e-01 85.6% 93.6%
4299005 5084.1.1.21 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TSA 0.60 55.0 4.65e-01 99.2% 85.3%
1065880 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.59 54.0 4.41e-01 99.2% 96.7%
1760411 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.59 38.0 4.47e-01 87.3% 96.3%
3398781 5087.3.1.2 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › MTP_lip_bd 0.57 52.0 3.91e-01 100.0% 92.6%
4976957 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.52 47.0 3.96e-01 99.2% 95.9%
D2 medium residues 43-155
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13557.13 best Phenol_MetA_deg 29.8 9.30e-07 98.2% 36.4%
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.81 75.0 5.50e-01 100.0% 47.3%
3kvnA02 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.79 73.0 5.22e-01 100.0% 46.1%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.79 72.0 5.51e-01 100.0% 53.2%
6wimA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.76 71.0 4.84e-01 100.0% 35.5%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.76 64.0 4.64e-01 100.0% 33.9%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.75 70.0 4.84e-01 100.0% 33.3%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.74 69.0 4.51e-01 100.0% 41.9%
2vdfA00 2.40.128.100 Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin 0.74 68.0 5.35e-01 100.0% 58.2%
7vu0A01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.71 66.0 4.36e-01 100.0% 36.8%
1t16A00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.71 65.0 4.34e-01 100.0% 82.7%
2f1cX00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.69 63.0 4.83e-01 100.0% 44.4%
1bp1A01 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.68 61.0 5.25e-01 100.0% 93.9%
4aipC02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.67 61.0 3.90e-01 100.0% 25.3%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.67 62.0 4.17e-01 100.0% 31.2%
1xkwA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.67 61.0 3.90e-01 100.0% 26.3%
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.66 60.0 3.88e-01 100.0% 29.5%
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.66 60.0 4.06e-01 100.0% 28.8%
3fhhA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.66 59.0 3.85e-01 99.1% 30.0%
2hdiA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.66 60.0 3.94e-01 100.0% 24.5%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.65 60.0 3.98e-01 100.0% 29.4%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.65 55.0 5.06e-01 100.0% 70.9%
4c4vB02 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.65 58.0 4.08e-01 100.0% 36.7%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.65 57.0 4.88e-01 100.0% 83.4%
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.64 58.0 5.04e-01 100.0% 68.6%
1ek9A00 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.64 46.0 3.10e-01 73.5% 61.7%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.64 57.0 4.17e-01 100.0% 80.3%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.63 57.0 4.02e-01 100.0% 39.9%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.62 55.0 4.60e-01 100.0% 79.9%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.61 54.0 4.44e-01 100.0% 79.8%
2rckA01 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.60 54.0 4.36e-01 100.0% 89.9%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.60 50.0 3.22e-01 89.4% 62.3%
1n9eA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.60 50.0 3.22e-01 89.4% 63.2%
2q03A00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.59 46.0 4.39e-01 97.3% 69.9%
1lshA01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.59 53.0 4.03e-01 98.2% 98.5%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.58 44.0 4.13e-01 93.8% 64.1%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.57 49.0 4.44e-01 100.0% 70.3%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.56 47.0 4.20e-01 100.0% 65.2%
1uliB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 46.0 4.04e-01 92.0% 94.4%
2b1xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 46.0 4.08e-01 92.0% 96.4%
2gvhB02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 41.0 4.13e-01 77.9% 96.6%
4gb5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 45.0 4.22e-01 92.9% 95.3%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.53 47.0 4.42e-01 95.6% 95.6%
4ibnA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 39.0 3.35e-01 77.9% 89.9%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.53 47.0 4.13e-01 100.0% 73.0%
1g6q102 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.53 47.0 4.05e-01 100.0% 97.3%
1q42A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 42.0 3.81e-01 89.4% 97.5%
2xzmE01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 32.0 3.26e-01 77.9% 60.3%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 44.0 3.97e-01 94.7% 85.1%
4kz1A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.51 42.0 3.97e-01 89.4% 100.0%
3ejvA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 42.0 3.84e-01 93.8% 97.5%
3ub1A01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 40.0 3.84e-01 86.7% 89.0%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964155 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.85 81.0 5.98e-01 100.0% 51.7%
3969681 5084.1.1.11 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.85 80.0 5.71e-01 100.0% 43.1%
1568816 5084.1.1.11 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.84 79.0 5.83e-01 100.0% 47.4%
4136508 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.82 77.0 5.37e-01 100.0% 49.4%
4450761 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.81 76.0 5.25e-01 100.0% 41.1%
885 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.81 75.0 5.50e-01 100.0% 47.3%
4377115 5084.3.1.0 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.80 74.0 4.20e-01 100.0% 13.9%
3964572 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.80 74.0 5.36e-01 100.0% 41.3%
4437932 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.78 73.0 5.10e-01 100.0% 39.7%
3965061 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.78 72.0 5.42e-01 100.0% 52.7%
4102065 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.78 72.0 5.33e-01 100.0% 49.8%
3963443 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.76 60.0 5.78e-01 82.3% 92.8%
4618904 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.76 71.0 4.79e-01 100.0% 33.7%
3964588 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.75 70.0 4.98e-01 100.0% 41.4%
3387592 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.75 69.0 4.80e-01 100.0% 36.7%
884 5084.2.1.2 beta barrels › Outer membrane meander beta-barrels › OMPT-like › OMPT-like › OpcA 0.74 68.0 5.35e-01 100.0% 58.2%
4393174 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.71 65.0 4.44e-01 100.0% 35.5%
3789885 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.70 64.0 5.21e-01 100.0% 70.0%
3622176 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.69 62.0 4.14e-01 100.0% 33.6%
4055728 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.68 62.0 4.38e-01 100.0% 36.0%
3941832 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.67 61.0 4.19e-01 100.0% 49.5%
3968185 5085.1.1.1 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.67 61.0 4.06e-01 100.0% 64.1%
5032631 5084.3.1.0 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.67 60.0 4.70e-01 100.0% 51.4%
4361209 7026.1.1.13 beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › Hobbit 0.67 54.0 4.45e-01 89.4% 49.0%
3387633 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.66 60.0 4.32e-01 100.0% 34.9%
3515710 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.66 60.0 4.27e-01 100.0% 34.0%
3925444 5087.3.1.0 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C 0.66 52.0 4.22e-01 89.4% 45.5%
3627058 7026.1.1.0 beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 0.65 54.0 4.46e-01 89.4% 70.0%
None 0.65 55.0 5.06e-01 100.0% 70.9%
4642761 331.22.1.2 a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 0.65 48.0 3.88e-01 100.0% 41.4%
4417262 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.64 58.0 5.08e-01 99.1% 72.5%
3388060 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.64 57.0 4.86e-01 100.0% 69.3%
3975352 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.63 56.0 5.08e-01 100.0% 71.2%
4524066 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.63 56.0 3.61e-01 100.0% 30.1%
3847303 5084.5.1.67 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Hobbit 0.63 51.0 4.37e-01 89.4% 64.2%
3975660 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.63 56.0 4.55e-01 99.1% 74.3%
4012109 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.63 57.0 3.91e-01 100.0% 31.2%
3164538 5084.1.1.2 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane 0.63 55.0 4.68e-01 100.0% 68.7%
2719886 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.62 56.0 3.36e-01 100.0% 29.7%
4589836 5085.1.1.2 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › PF27489, PF29296 0.61 56.0 3.66e-01 100.0% 56.6%
4185639 5087.2.1.2 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 0.60 54.0 3.94e-01 98.2% 97.4%
3278413 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.60 50.0 4.64e-01 89.4% 93.6%
3786132 330.1.1.4 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 0.60 42.0 3.87e-01 78.8% 56.6%
4968231 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.60 43.0 2.94e-01 79.6% 21.9%
3398765 5087.2.1.2 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 0.59 53.0 4.07e-01 98.2% 95.3%
3838975 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.59 52.0 4.47e-01 97.3% 73.5%
3977398 5084.1.1.16 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom 0.59 52.0 4.70e-01 100.0% 74.4%
3838829 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.59 53.0 4.51e-01 99.1% 69.2%
3837948 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.59 52.0 4.44e-01 100.0% 69.5%
4279299 5084.1.1.2 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane 0.58 52.0 4.50e-01 100.0% 72.2%
3839285 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.58 52.0 4.43e-01 100.0% 70.3%
3588483 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.57 46.0 4.42e-01 87.6% 93.3%
1558627 243.1.1.15 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › T4BSS_DotI_IcmL 0.57 47.0 4.46e-01 89.4% 99.3%
3840054 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.57 50.0 4.67e-01 96.5% 80.7%
139114 243.1.1.1 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B 0.56 47.0 4.03e-01 92.0% 89.8%
3398781 5087.3.1.2 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › MTP_lip_bd 0.56 50.0 3.76e-01 100.0% 51.6%
3964096 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.55 48.0 4.25e-01 100.0% 64.0%
3982863 5084.5.1.22 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DUF3971 0.54 47.0 3.24e-01 100.0% 29.8%