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CAKLQF020000012.1__CAH1086326.1__SAMEA5780031_02352__00018

Bact-Vir

CAKLQF020000012.1__CAH1086326.1__SAMEA5780031_02352__00018

Identity

Kingdom:
phage

Quality

93.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-240
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03502.20 best Channel_Tsx 35.3 1.60e-08 97.7% 67.2%
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tlyA00 2.40.230.20 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like 0.86 83.0 7.83e-01 100.0% 97.6%
4fqeA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.79 60.0 6.68e-01 98.2% 98.8%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.76 68.0 6.98e-01 98.6% 99.0%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.69 39.0 4.88e-01 78.8% 88.7%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.66 58.0 5.58e-01 100.0% 82.6%
4rlcA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.66 40.0 5.10e-01 99.5% 97.8%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.66 40.0 5.09e-01 87.6% 100.0%
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.65 48.0 5.21e-01 100.0% 89.9%
3kvnA02 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.63 58.0 5.20e-01 100.0% 89.3%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.63 59.0 5.45e-01 98.6% 85.5%
2o4vA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.63 58.0 4.67e-01 99.1% 91.7%
3rd6A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 37.0 4.48e-01 98.2% 87.5%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.63 58.0 5.54e-01 100.0% 85.6%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 39.0 4.35e-01 87.6% 78.6%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.62 57.0 5.26e-01 100.0% 86.4%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.61 57.0 5.04e-01 100.0% 99.7%
1af6A00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.61 57.0 4.55e-01 99.5% 98.6%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.61 38.0 4.21e-01 99.5% 75.9%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.61 56.0 5.05e-01 100.0% 98.6%
5dl5A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.60 54.0 4.38e-01 97.2% 94.2%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.60 42.0 4.93e-01 100.0% 98.7%
4puxA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.60 41.0 4.79e-01 89.9% 96.2%
3jtyB01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.60 55.0 4.53e-01 97.7% 97.6%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.60 49.0 4.14e-01 85.3% 66.6%
4frxA01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.60 54.0 4.44e-01 97.7% 97.5%
3g7gH00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.60 40.0 4.76e-01 89.9% 97.4%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.59 55.0 4.41e-01 99.1% 87.2%
7vu0A01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.59 54.0 4.31e-01 98.2% 98.4%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.59 54.0 4.63e-01 100.0% 93.2%
4k3bA06 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.59 55.0 4.59e-01 100.0% 92.4%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.59 37.0 4.29e-01 100.0% 86.5%
1i78B00 2.40.128.90 Mainly Beta › Beta Barrel › Lipocalin › OMPT-like 0.58 55.0 4.95e-01 99.5% 99.3%
3sybA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.58 54.0 4.39e-01 100.0% 99.0%
4c4vB02 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.58 54.0 4.50e-01 100.0% 99.2%
2zf3C00 2.50.20.30 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.58 43.0 4.63e-01 100.0% 89.6%
6wulB01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.58 53.0 4.49e-01 98.6% 95.2%
2porA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.57 53.0 4.73e-01 98.6% 98.3%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.56 53.0 3.72e-01 100.0% 99.7%
2hdiA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.56 52.0 3.99e-01 98.2% 98.9%
4aipC02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.56 51.0 3.77e-01 98.6% 98.9%
6fokB01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.55 51.0 3.63e-01 99.1% 69.9%
7btxA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.55 50.0 4.33e-01 99.1% 91.8%
1fepA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.54 46.0 3.45e-01 89.9% 85.0%
3eniC00 2.50.10.10 Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A 0.54 46.0 3.85e-01 88.5% 92.7%
2w16A03 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.54 49.0 3.65e-01 98.2% 98.7%
5dl8A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.53 50.0 4.08e-01 100.0% 89.5%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.53 48.0 4.36e-01 99.5% 91.1%
3v89A02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 48.0 3.41e-01 100.0% 99.5%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.50 48.0 3.72e-01 100.0% 98.4%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3971633 5084.6.1.1 beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel › Channel_Tsx 0.96 95.0 9.04e-01 100.0% 98.4%
3968722 5084.6.1.0 beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel 0.94 92.0 8.56e-01 99.5% 98.8%
4619594 5084.6.1.1 beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel › Channel_Tsx 0.90 87.0 8.30e-01 100.0% 95.5%
898 5084.6.1.1 beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel › Channel_Tsx 0.86 83.0 7.83e-01 100.0% 97.6%
3976237 5084.6.1.1 beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel › Channel_Tsx 0.85 81.0 8.08e-01 98.6% 99.6%
3974058 5084.5.1.28 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › CopB 0.81 73.0 7.42e-01 100.0% 96.2%
3980621 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.74 67.0 6.77e-01 100.0% 95.8%
3976425 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.73 67.0 6.81e-01 100.0% 99.0%
3965241 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.71 66.0 5.83e-01 100.0% 96.1%
3971437 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.70 65.0 6.56e-01 100.0% 99.1%
4662377 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.70 65.0 5.79e-01 100.0% 94.6%
4339571 5084.5.4.0 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein 0.69 64.0 5.07e-01 100.0% 65.8%
4582939 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.69 63.0 5.55e-01 100.0% 92.9%
4603160 5084.5.4.4 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › YaiO 0.68 63.0 6.16e-01 99.5% 100.0%
3975988 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.67 60.0 5.65e-01 100.0% 79.6%
874 9.13.1.3 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 0.66 40.0 5.09e-01 87.6% 100.0%
4006163 5084.5.4.13 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › DUF481, Porin_OmpG 0.65 60.0 5.43e-01 100.0% 91.2%
3164364 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.65 60.0 5.45e-01 100.0% 83.7%
3839826 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.64 53.0 4.30e-01 85.3% 59.5%
3074009 9.1.1.31 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › VtrC 0.64 39.0 4.93e-01 100.0% 99.2%
4670451 5084.5.4.9 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › UPF0164 0.63 59.0 5.06e-01 100.0% 83.0%
4856841 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.62 57.0 4.92e-01 99.1% 97.9%
3782878 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.62 58.0 4.87e-01 99.1% 100.0%
890 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.62 57.0 4.92e-01 98.6% 98.5%
4099548 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.62 42.0 4.98e-01 99.5% 98.7%
3574877 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.62 41.0 3.56e-01 84.8% 46.1%
3966665 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.61 57.0 4.47e-01 99.5% 99.1%
200993 5084.9.1.1 beta barrels › Outer membrane meander beta-barrels › Lipid A deacylase LpxR › Lipid A deacylase LpxR › LpxR 0.61 56.0 5.05e-01 100.0% 98.6%
4135567 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.61 55.0 4.58e-01 99.5% 92.8%
4501883 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.60 57.0 4.68e-01 100.0% 92.5%
4009827 5084.5.1.4 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.60 55.0 4.51e-01 99.1% 99.3%
3839274 5084.5.1.25 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › HP_OMP_2 0.60 55.0 4.17e-01 98.2% 96.6%
4416793 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.60 56.0 4.48e-01 99.1% 99.5%
3945018 5084.5.1.4 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.60 55.0 4.48e-01 98.2% 97.7%
3615659 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.59 47.0 5.02e-01 97.2% 95.3%
3396582 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.59 55.0 4.75e-01 100.0% 98.2%
4885978 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.59 55.0 4.76e-01 100.0% 91.2%
None 0.59 55.0 4.78e-01 100.0% 98.1%
3970589 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.59 54.0 4.64e-01 100.0% 99.1%
5059286 4200.1.1.0 beta barrels › YmcC-like › YmcC-like › YmcC-like 0.59 53.0 5.31e-01 100.0% 96.4%
4181051 5087.3.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht 0.58 41.0 3.13e-01 71.4% 46.3%
3969394 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.58 54.0 4.55e-01 100.0% 92.5%
3981236 5084.5.4.6 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › TraF_2 0.58 53.0 4.87e-01 100.0% 84.8%
4224449 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.58 44.0 4.85e-01 100.0% 96.0%
3351533 5084.5.1.23 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › TOC159_MAD 0.58 51.0 4.47e-01 92.6% 80.0%
2141087 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.58 53.0 4.53e-01 98.6% 92.6%
4188949 5084.10.1.1 beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD 0.58 47.0 3.46e-01 84.8% 41.8%
1907333 5084.5.1.7 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Campylo_MOMP 0.58 52.0 4.26e-01 97.7% 94.5%
4027955 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.57 53.0 4.49e-01 100.0% 100.0%
888 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.57 53.0 4.73e-01 98.6% 98.3%
3964794 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.57 53.0 5.13e-01 99.1% 99.2%
None 0.56 52.0 3.96e-01 98.2% 99.0%
3972370 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.56 52.0 4.34e-01 100.0% 92.8%
3604240 71.1.1.25 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF6612 0.56 45.0 4.62e-01 100.0% 87.1%
3254506 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.56 41.0 4.64e-01 100.0% 98.2%
3385986 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.56 45.0 4.74e-01 85.7% 92.4%
3635091 9.13.1.4 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 0.55 41.0 4.62e-01 91.2% 97.6%
3644755 5084.5.1.23 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › TOC159_MAD 0.55 46.0 4.01e-01 86.2% 87.9%
1883909 5084.5.3.0 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.55 45.0 3.14e-01 84.8% 47.8%
3837982 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.55 40.0 4.43e-01 100.0% 90.6%
3981844 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 50.0 3.88e-01 96.3% 92.2%
3947597 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.55 45.0 4.01e-01 84.8% 66.3%
2834683 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.55 51.0 4.21e-01 100.0% 100.0%
3071075 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.55 49.0 4.35e-01 99.1% 93.8%
3944999 5084.8.1.0 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore 0.55 49.0 3.89e-01 96.3% 92.2%
3976823 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.55 44.0 3.50e-01 85.3% 42.8%
4009987 5084.8.1.0 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore 0.55 50.0 3.95e-01 96.8% 93.3%
147643 522.1.1.1 a+b two layers › Bacteriochlorophyll A protein › Bacteriochlorophyll A protein › Bacteriochlorophyll A protein › BChl_A 0.54 46.0 3.88e-01 88.9% 92.4%
3970069 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.54 49.0 4.04e-01 100.0% 99.7%
4524066 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.53 48.0 3.56e-01 97.7% 98.4%
4219107 5084.10.1.1 beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD 0.53 48.0 3.55e-01 96.8% 95.7%
4358482 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.53 49.0 3.33e-01 100.0% 98.1%
4285298 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.52 43.0 4.58e-01 100.0% 96.8%
5034787 5084.5.3.17 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › DUF5916 0.52 47.0 3.66e-01 95.4% 71.0%
4008074 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.51 47.0 3.66e-01 97.2% 87.8%
4188109 5084.5.1.10 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 0.51 47.0 4.09e-01 97.7% 91.3%