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CAKLQF020000012.1__CAH1086353.1__SAMEA5780031_02361__00027

Bact-Vir

CAKLQF020000012.1__CAH1086353.1__SAMEA5780031_02361__00027

Identity

Kingdom:
phage

Quality

93.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-103
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fvvA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.79 74.0 6.42e-01 100.0% 74.3%
5is2A03 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.76 71.0 5.42e-01 100.0% 46.8%
3mc1A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.76 69.0 5.97e-01 100.0% 66.4%
3n28A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.75 69.0 5.96e-01 100.0% 66.9%
3m1yC01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.74 68.0 5.99e-01 100.0% 69.6%
3d6jA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.73 66.0 5.84e-01 100.0% 69.2%
2no4B01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.73 65.0 5.63e-01 100.0% 64.9%
2ah5A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 64.0 5.70e-01 100.0% 68.1%
3l8hA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.69 63.0 5.20e-01 100.0% 66.9%
7ef6A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.68 62.0 5.30e-01 100.0% 67.9%
3umcA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.67 61.0 5.32e-01 100.0% 66.9%
7cyiD01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 57.0 5.08e-01 100.0% 66.9%
3fzqB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.64 56.0 4.90e-01 100.0% 63.7%
1qmgB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 49.0 3.85e-01 100.0% 42.1%
4bucA03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.58 40.0 3.68e-01 100.0% 55.5%
3i9fB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 52.0 4.42e-01 100.0% 67.5%
2xrfC00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.57 45.0 3.24e-01 83.3% 72.4%
3s5jA02 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 50.0 4.56e-01 100.0% 86.1%
5cygB00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.56 44.0 3.26e-01 85.3% 75.0%
1rkuA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.56 44.0 4.32e-01 100.0% 77.5%
3vnrA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.55 48.0 3.28e-01 100.0% 66.7%
1kolA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 47.0 4.11e-01 100.0% 88.0%
1e3mB02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.53 35.0 3.27e-01 84.3% 51.9%
1j6uA03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.53 43.0 3.97e-01 99.0% 68.9%
1xr4A02 3.40.1080.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase 0.52 46.0 3.43e-01 100.0% 50.9%
5b55A01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 43.0 3.62e-01 96.1% 59.5%
2r8rA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 44.0 3.60e-01 100.0% 58.9%
1f6bB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 44.0 3.72e-01 100.0% 78.9%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3947862 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.83 74.0 5.73e-01 99.0% 46.8%
3387063 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.82 76.0 5.89e-01 100.0% 51.4%
5040283 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.80 73.0 5.50e-01 100.0% 44.6%
4984747 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.80 71.0 5.73e-01 100.0% 52.7%
5073611 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.77 72.0 5.49e-01 100.0% 47.3%
9884 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.77 69.0 5.40e-01 100.0% 48.1%
5070396 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.75 69.0 5.16e-01 100.0% 43.7%
3947037 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.73 63.0 4.89e-01 100.0% 44.2%
1412227 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.73 60.0 4.69e-01 100.0% 42.9%
3981264 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.73 62.0 4.82e-01 100.0% 43.2%
4948444 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.73 65.0 5.11e-01 100.0% 48.5%
5054763 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.72 59.0 4.73e-01 86.3% 48.9%
4980158 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.72 65.0 4.90e-01 100.0% 43.2%
4977750 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.72 67.0 5.07e-01 100.0% 47.1%
4945105 2006.1.1.36 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Put_Phosphatase 0.72 66.0 5.11e-01 100.0% 51.6%
3306809 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.71 63.0 5.47e-01 100.0% 63.9%
4020567 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.70 64.0 4.79e-01 100.0% 44.5%
4398883 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.69 62.0 4.84e-01 100.0% 47.1%
5065341 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.69 63.0 4.90e-01 100.0% 49.8%
3279129 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.69 64.0 4.60e-01 100.0% 70.7%
5073536 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.69 62.0 4.80e-01 100.0% 46.9%
4366278 2006.1.1.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like 0.68 61.0 4.98e-01 100.0% 70.0%
4875081 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.68 62.0 4.70e-01 100.0% 43.6%
4875922 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.67 62.0 4.79e-01 100.0% 47.9%
5036136 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.61 54.0 3.96e-01 100.0% 65.5%
4967436 2006.1.4.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN 0.58 51.0 4.36e-01 100.0% 67.2%
3944894 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.58 51.0 4.16e-01 100.0% 52.1%
3288725 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.58 52.0 4.32e-01 100.0% 62.0%
3203055 2003.6.1.0 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like 0.57 49.0 3.80e-01 100.0% 74.2%
4186279 2007.1.14.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Ferrochelatase 0.56 43.0 3.09e-01 83.3% 36.1%
4026373 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 37.0 2.83e-01 70.6% 66.5%
3603264 2007.13.1.1 a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit › CobN-Mg_chel 0.55 47.0 3.76e-01 96.1% 81.4%
3593873 7573.1.1.0 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like 0.54 48.0 4.10e-01 100.0% 74.7%
5035371 7573.1.1.3 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyl_synth 0.53 47.0 4.22e-01 100.0% 82.8%
5058329 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.53 46.0 3.67e-01 100.0% 74.1%
4955849 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.51 45.0 3.61e-01 100.0% 74.8%
3349197 109.4.1.192 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.51 36.0 2.85e-01 73.5% 50.4%
4932902 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.51 45.0 4.14e-01 100.0% 87.4%
3942197 2004.1.1.92 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KdpD 0.51 44.0 3.46e-01 100.0% 51.2%
3683133 7577.1.1.9 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › OKR_DC_1 0.51 44.0 3.22e-01 100.0% 45.2%