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CAKLQF020000012.1__CAH1086423.1__SAMEA5780031_02385__00051
Bact-VirCAKLQF020000012.1__CAH1086423.1__SAMEA5780031_02385__00051
Identity
- Kingdom:
- phage
Quality
97.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-144
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02580.22 best | Tyr_Deacylase | 177.7 | 2.40e-52 | 100.0% | 100.0% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j7gA00 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.98 | 96.0 | 9.59e-01 | 100.0% | 98.6% |
| 4nbiB00 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.97 | 94.0 | 9.22e-01 | 100.0% | 96.7% |
| 1tc5C00 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.91 | 87.0 | 7.83e-01 | 100.0% | 97.8% |
| 4rr9A01 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.82 | 73.0 | 7.61e-01 | 100.0% | 98.5% |
| 4rrfA01 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.81 | 73.0 | 7.49e-01 | 100.0% | 98.5% |
| 1w5dA02 | 3.50.80.20 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 | 0.69 | 46.0 | 5.31e-01 | 100.0% | 94.1% |
| 3if5A02 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.64 | 38.0 | 4.66e-01 | 88.8% | 93.3% |
| 2ymbA00 | 3.30.870.30 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain | 0.59 | 42.0 | 4.15e-01 | 97.9% | 68.0% |
| 4fhdA02 | 3.80.30.30 | Alpha Beta › Alpha-Beta Horseshoe › pyruvate-formate lyase- activating enzyme › | 0.57 | 47.0 | 3.97e-01 | 86.0% | 74.4% |
| 1wteA02 | 3.40.1560.10 | Alpha Beta › 3-Layer(aba) Sandwich › type ii restriction endonuclease, domain 2 › type ii restriction endonuclease, domain 2 | 0.57 | 40.0 | 4.27e-01 | 92.3% | 83.1% |
| 3qtgA03 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.56 | 35.0 | 3.83e-01 | 98.6% | 76.5% |
| 3fg9C01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 44.0 | 4.47e-01 | 83.2% | 100.0% |
| 7wjlA01 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.55 | 43.0 | 3.07e-01 | 83.9% | 67.6% |
| 1jilA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 48.0 | 4.20e-01 | 96.5% | 90.5% |
| 3milB00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.55 | 47.0 | 3.97e-01 | 92.3% | 82.4% |
| 4g6uA02 | 3.40.1350.110 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 43.0 | 4.44e-01 | 88.1% | 88.4% |
| 4impA02 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 41.0 | 3.61e-01 | 82.5% | 81.0% |
| 4yztA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 46.0 | 3.61e-01 | 97.2% | 87.3% |
| 1vp4A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 39.0 | 3.38e-01 | 81.8% | 69.0% |
| 2pkaA00 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 22.0 | 2.79e-01 | 88.1% | 66.3% |
| 3mu7A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 44.0 | 3.53e-01 | 93.7% | 81.0% |
| 2x5dD02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 39.0 | 3.29e-01 | 81.8% | 61.3% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4027775 | 2494.1.1.1 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase | 0.98 | 95.0 | 8.99e-01 | 100.0% | 94.5% |
| 3592366 | 2494.1.1.0 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) | 0.97 | 95.0 | 9.37e-01 | 100.0% | 97.3% |
| 3578666 | 2494.1.1.1 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase | 0.97 | 95.0 | 9.34e-01 | 100.0% | 97.3% |
| 3501027 | 2494.1.1.1 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase | 0.97 | 95.0 | 9.32e-01 | 100.0% | 96.7% |
| 4334442 | 2494.1.1.1 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase | 0.97 | 94.0 | 9.14e-01 | 100.0% | 96.1% |
| 4133110 | 2494.1.1.1 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase | 0.96 | 94.0 | 9.06e-01 | 100.0% | 98.7% |
| 4039304 | 2494.1.1.1 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase | 0.96 | 93.0 | 8.89e-01 | 100.0% | 95.6% |
| 4259485 | 2494.1.1.1 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase | 0.95 | 92.0 | 8.83e-01 | 100.0% | 94.4% |
| 3957160 | 2494.1.1.1 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase | 0.94 | 86.0 | 8.85e-01 | 95.1% | 99.3% |
| 2157268 | 2494.1.1.1 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase | 0.93 | 90.0 | 8.47e-01 | 100.0% | 94.6% |
| 3477688 | 2494.1.1.1 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase | 0.93 | 90.0 | 8.73e-01 | 100.0% | 98.7% |
| 3591095 | 2494.1.1.0 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) | 0.91 | 88.0 | 7.81e-01 | 100.0% | 95.8% |
| 11455 | 2494.1.1.1 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase | 0.91 | 87.0 | 7.81e-01 | 100.0% | 97.3% |
| 4320848 | 2494.1.1.2 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › tRNA-Thr_ED | 0.82 | 72.0 | 7.05e-01 | 100.0% | 86.0% |
| 4931179 | 309.1.2.3 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA-Thr_ED | 0.80 | 73.0 | 7.22e-01 | 100.0% | 90.7% |
| 5045886 | 2494.1.1.2 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › tRNA-Thr_ED | 0.80 | 70.0 | 7.29e-01 | 100.0% | 98.5% |
| 4966662 | 2494.1.1.0 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) | 0.79 | 72.0 | 7.34e-01 | 100.0% | 96.4% |
| 4196221 | 2494.1.1.2 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › tRNA-Thr_ED | 0.79 | 72.0 | 6.95e-01 | 100.0% | 85.6% |
| 407438 | 2494.1.1.2 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › tRNA-Thr_ED | 0.79 | 72.0 | 7.24e-01 | 100.0% | 94.5% |
| 5076344 | 2494.1.1.2 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › tRNA-Thr_ED | 0.78 | 72.0 | 7.17e-01 | 100.0% | 93.8% |
| 5037270 | 2494.1.1.2 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › tRNA-Thr_ED | 0.78 | 65.0 | 7.01e-01 | 92.3% | 99.2% |
| 4978859 | 2494.1.1.2 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › tRNA-Thr_ED | 0.78 | 71.0 | 7.24e-01 | 100.0% | 97.9% |
| 5052286 | 2494.1.1.2 ↗ | a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › tRNA-Thr_ED | 0.77 | 74.0 | 6.65e-01 | 100.0% | 96.8% |
| 5075480 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.59 | 38.0 | 3.68e-01 | 91.6% | 57.0% |
| 4030888 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.59 | 47.0 | 3.93e-01 | 83.9% | 92.9% |
| 4948507 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.57 | 46.0 | 4.15e-01 | 86.7% | 74.7% |
| 4467711 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.56 | 50.0 | 3.82e-01 | 97.2% | 61.8% |
| 4513977 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.56 | 50.0 | 3.87e-01 | 97.2% | 63.8% |
| 3288720 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.55 | 44.0 | 4.46e-01 | 83.9% | 97.9% |
| 3412443 | 246.2.1.5 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,ASMase_C | 0.52 | 41.0 | 2.95e-01 | 84.6% | 71.5% |
| 3222716 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.50 | 26.0 | 3.12e-01 | 93.7% | 73.7% |
| 5059125 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.50 | 39.0 | 3.19e-01 | 93.0% | 45.5% |