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CAKLQF020000013.1__CAH1086712.1__SAMEA5780031_02466__00005

Bact-Vir

CAKLQF020000013.1__CAH1086712.1__SAMEA5780031_02466__00005

Identity

Kingdom:
phage

Quality

90.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-28_50-74_95-111_144-166
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01656.30 best CbiA 28.7 1.60e-06 87.1% 33.6%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7d06C01 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.59 29.0 3.09e-01 90.3% 50.0%
1kjwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 33.0 2.99e-01 100.0% 43.8%
1peaA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 33.0 2.67e-01 100.0% 31.2%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3596797 2007.1.9.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 0.57 30.0 2.58e-01 100.0% 32.9%
3413108 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 37.0 2.82e-01 100.0% 28.8%
4997643 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.53 48.0 3.67e-01 100.0% 50.5%
4025784 2003.1.5.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 0.52 42.0 2.98e-01 92.5% 93.6%
3499922 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.51 35.0 2.83e-01 100.0% 36.7%
3648840 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.50 44.0 4.06e-01 100.0% 86.4%