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CAKLQF020000013.1__CAH1086809.1__SAMEA5780031_02495__00032

Bact-Vir

CAKLQF020000013.1__CAH1086809.1__SAMEA5780031_02495__00032

Identity

Kingdom:
phage

Quality

97.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-220
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01168.27 best Ala_racemase_N 203.5 4.90e-60 100.0% 97.3%
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rcqA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.97 94.0 9.48e-01 100.0% 100.0%
4qhrA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.94 91.0 9.22e-01 100.0% 100.0%
4eclA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.92 90.0 8.83e-01 100.0% 97.3%
5facA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.92 88.0 8.67e-01 98.6% 100.0%
4lusA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.92 88.0 8.75e-01 98.6% 100.0%
5yycA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.92 88.0 8.71e-01 98.6% 100.0%
3oo2A02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.92 88.0 8.83e-01 98.6% 100.0%
3mubA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.91 88.0 8.72e-01 100.0% 97.2%
2dy3C02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.91 87.0 8.78e-01 98.6% 100.0%
3kw3A02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.90 88.0 8.78e-01 100.0% 100.0%
3hurA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.90 87.0 8.55e-01 100.0% 97.3%
4beqA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.89 85.0 8.46e-01 98.6% 100.0%
3co8A02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.89 84.0 8.45e-01 100.0% 97.2%
8d88A01 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.88 83.0 7.72e-01 98.6% 100.0%
4v15A02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.87 83.0 8.09e-01 99.0% 100.0%
3anuA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.86 82.0 8.01e-01 98.6% 100.0%
3cpgA00 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.86 82.0 7.61e-01 99.0% 95.3%
3wqcA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.85 80.0 7.86e-01 98.6% 100.0%
7f8eA01 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.84 79.0 7.78e-01 97.6% 100.0%
6n2aB02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.84 78.0 7.55e-01 97.6% 100.0%
1w8gA00 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.84 80.0 7.75e-01 99.0% 100.0%
2yxxA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.83 78.0 7.54e-01 97.1% 100.0%
7kh2B01 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.83 79.0 7.36e-01 100.0% 99.6%
3llxA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.83 79.0 7.78e-01 99.0% 100.0%
1knwA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.82 79.0 7.45e-01 100.0% 99.6%
7jpjB01 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.81 77.0 7.23e-01 99.0% 99.2%
3mt1B02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.77 73.0 7.37e-01 99.5% 100.0%
1ad1A00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.74 65.0 5.99e-01 92.4% 92.4%
3chvA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.73 65.0 5.88e-01 94.3% 84.9%
1vhcF00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.71 61.0 6.07e-01 94.3% 87.8%
1jqxA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 62.0 5.72e-01 93.3% 83.5%
1dl3B00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 58.0 6.09e-01 92.4% 94.3%
4cczA01 3.20.20.330 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain 0.65 56.0 4.91e-01 91.9% 87.6%
2y1hB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.64 57.0 5.31e-01 95.2% 89.8%
4jz5A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 52.0 5.25e-01 96.2% 90.3%
3sr7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 53.0 4.81e-01 93.3% 71.1%
1r0sA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 31.0 3.86e-01 89.5% 82.6%
3r7wA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 42.0 4.44e-01 86.2% 85.2%
2o3rA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 30.0 3.80e-01 89.0% 83.9%
2oqrA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 22.0 3.41e-01 77.6% 87.5%
1dcfA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 33.0 4.05e-01 88.6% 92.5%
3bwwA01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.54 50.0 4.70e-01 100.0% 84.6%
3etnB00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.54 35.0 3.67e-01 88.1% 69.2%
1bwpA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.54 40.0 4.06e-01 78.1% 75.0%
2c42A02 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 33.0 3.81e-01 77.1% 81.5%
7jt8I02 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.52 36.0 4.21e-01 75.2% 100.0%
3v3tA01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.52 38.0 3.87e-01 85.2% 76.1%
3re1A02 3.40.50.10090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 30.0 3.70e-01 100.0% 90.6%
1xg5B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 42.0 4.00e-01 85.2% 84.4%
7b7tA02 3.40.50.2030 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 30.0 3.44e-01 86.2% 75.5%
2a3nA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.51 33.0 3.73e-01 92.9% 84.0%
5bjuA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 42.0 3.70e-01 87.1% 81.6%
3gpgA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.51 35.0 3.96e-01 86.7% 92.0%
4eyeA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 32.0 3.62e-01 100.0% 83.3%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4160753 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.99 95.0 8.82e-01 100.0% 82.0%
3966757 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.97 94.0 8.69e-01 100.0% 82.8%
4196377 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.96 93.0 9.16e-01 99.5% 94.1%
4249951 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.96 93.0 8.89e-01 100.0% 88.5%
3742989 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.96 94.0 8.76e-01 100.0% 89.0%
4333129 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.95 93.0 8.74e-01 100.0% 92.2%
4417813 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.95 93.0 8.66e-01 100.0% 91.0%
4132129 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.94 91.0 8.95e-01 100.0% 94.1%
4410931 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.94 91.0 8.78e-01 100.0% 90.4%
4293063 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.94 92.0 8.77e-01 100.0% 90.6%
4213859 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.94 91.0 8.54e-01 100.0% 89.8%
4351793 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.93 91.0 8.61e-01 100.0% 92.1%
4124216 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.93 91.0 8.70e-01 100.0% 91.5%
4496361 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.93 91.0 8.51e-01 100.0% 92.2%
4310828 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.93 91.0 8.56e-01 100.0% 91.3%
4242740 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.93 90.0 8.64e-01 100.0% 92.8%
4057588 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.93 90.0 8.55e-01 100.0% 91.7%
4655749 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.93 90.0 8.53e-01 100.0% 90.4%
4651941 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.93 90.0 8.38e-01 100.0% 86.0%
3011089 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.92 90.0 8.36e-01 100.0% 87.6%
149476 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.92 90.0 8.48e-01 100.0% 88.8%
4565670 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.92 90.0 8.75e-01 100.0% 93.8%
4061907 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.92 90.0 8.27e-01 100.0% 87.8%
1294353 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.92 89.0 8.41e-01 100.0% 89.7%
4241557 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.92 89.0 8.52e-01 100.0% 92.3%
2330701 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.92 89.0 8.33e-01 100.0% 85.9%
2417680 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.92 89.0 8.54e-01 100.0% 92.3%
4067516 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.92 89.0 8.22e-01 100.0% 85.9%
4066922 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.92 89.0 8.60e-01 100.0% 92.6%
4438246 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.92 89.0 8.66e-01 100.0% 93.3%
4069147 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.92 89.0 8.34e-01 100.0% 87.3%
2605034 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.91 89.0 8.35e-01 100.0% 90.5%
143614 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.91 88.0 8.36e-01 100.0% 88.3%
4369765 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.91 88.0 7.95e-01 100.0% 78.5%
4628057 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.91 88.0 8.52e-01 100.0% 91.3%
4636660 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.91 85.0 8.32e-01 100.0% 90.2%
4613107 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.91 88.0 7.82e-01 99.5% 80.4%
135604 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.90 87.0 8.33e-01 100.0% 91.6%
3705533 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.90 87.0 8.14e-01 100.0% 91.2%
4588412 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.89 86.0 8.16e-01 100.0% 89.6%
167619 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.88 84.0 8.09e-01 100.0% 88.5%
4264240 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.88 83.0 8.20e-01 100.0% 93.2%
421920 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.87 84.0 7.73e-01 100.0% 89.5%
4033320 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.87 84.0 8.12e-01 100.0% 92.6%
4156468 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.86 83.0 7.80e-01 100.0% 91.8%
4995138 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.86 82.0 7.83e-01 99.5% 93.8%
5023795 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.86 83.0 7.53e-01 100.0% 95.1%
167904 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.86 82.0 7.61e-01 99.0% 95.3%
4936570 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.86 83.0 7.35e-01 100.0% 98.9%
4291511 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.86 82.0 7.18e-01 100.0% 93.2%
4033844 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.85 82.0 7.90e-01 100.0% 91.9%
3331855 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.85 82.0 7.56e-01 100.0% 98.0%
3281796 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.85 82.0 7.09e-01 100.0% 99.0%
None 0.84 78.0 7.98e-01 96.2% 100.0%
4069520 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.84 81.0 7.71e-01 100.0% 90.8%
3587280 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.84 80.0 7.85e-01 99.0% 100.0%
5082467 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.84 81.0 7.58e-01 99.5% 100.0%
2543654 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.84 80.0 7.84e-01 99.0% 100.0%
2117123 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.84 80.0 7.91e-01 99.0% 99.5%
5050868 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.84 80.0 7.58e-01 99.5% 100.0%
1212730 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.84 80.0 7.45e-01 100.0% 92.9%
2705942 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.83 79.0 7.36e-01 100.0% 99.2%
4345687 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.83 80.0 7.65e-01 100.0% 91.9%
5058113 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.83 79.0 7.07e-01 100.0% 95.4%
5035905 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.82 79.0 7.44e-01 100.0% 100.0%
3277769 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.82 79.0 7.38e-01 100.0% 94.4%
5025377 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.82 79.0 7.37e-01 100.0% 96.8%
4368961 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.82 78.0 7.39e-01 100.0% 100.0%
2756219 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.81 77.0 7.14e-01 100.0% 98.8%
3885426 2002.1.1.53 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.77 69.0 6.89e-01 100.0% 91.2%
144719 2002.1.1.36 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind 0.74 65.0 5.90e-01 92.4% 89.5%
167501 2002.1.1.139 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › BKACE 0.73 65.0 5.88e-01 94.3% 84.9%
3399838 2002.1.1.90 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR 0.72 63.0 5.46e-01 92.9% 85.9%
3626021 2002.1.1.189 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRMT5_TIM 0.71 63.0 5.54e-01 94.8% 86.2%
4890585 2002.1.1.38 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TAL_FSA 0.71 61.0 5.97e-01 91.4% 84.4%
4209059 2002.1.1.97 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TMP-TENI 0.70 61.0 6.11e-01 95.2% 89.8%
4061595 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.67 60.0 4.56e-01 95.2% 87.9%
3215997 2002.1.1.290 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 0.66 55.0 5.39e-01 87.1% 93.8%
2073551 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.61 43.0 3.89e-01 71.0% 98.2%
3258324 2008.1.1.156 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF29906 0.59 35.0 3.95e-01 86.2% 75.0%
3616055 2002.1.1.290 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 0.56 50.0 4.93e-01 94.8% 91.8%
4126816 7577.1.1.1 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.51 47.0 3.23e-01 100.0% 70.0%
5073009 2007.3.1.6 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 0.51 35.0 3.81e-01 84.3% 83.5%
1787656 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.51 38.0 4.02e-01 76.7% 86.1%
D2 high residues 238-365
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00842.28 best Ala_racemase_C 137.4 2.80e-40 100.0% 97.6%
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rcqA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.97 90.0 8.42e-01 100.0% 81.3%
5yycA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.96 86.0 8.41e-01 100.0% 87.4%
4lusB01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.94 87.0 8.18e-01 100.0% 82.6%
3kw3B01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.94 88.0 8.28e-01 100.0% 84.4%
4beuA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.93 89.0 7.82e-01 100.0% 72.6%
4eclA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.93 89.0 8.36e-01 100.0% 84.8%
3co8A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.93 87.0 8.18e-01 100.0% 83.8%
5zl6A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.91 85.0 7.99e-01 100.0% 82.8%
2dy3D01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.90 76.0 7.81e-01 100.0% 91.1%
3oo2A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.89 81.0 7.61e-01 100.0% 81.3%
2wssA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.75 43.0 4.99e-01 81.2% 77.4%
4g6iC02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.71 51.0 5.80e-01 92.2% 98.9%
4g6iB01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.71 46.0 5.44e-01 80.5% 94.4%
1i8dA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.71 46.0 5.49e-01 80.5% 95.5%
3hurA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.71 65.0 5.97e-01 100.0% 77.0%
1kzlA02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.70 49.0 5.48e-01 89.8% 92.1%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.67 44.0 4.72e-01 85.9% 76.6%
2zzeA03 2.40.30.130 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.65 39.0 4.36e-01 82.0% 77.6%
2crvA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 45.0 5.23e-01 79.7% 100.0%
2hcjB02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 43.0 4.91e-01 77.3% 94.7%
3p26B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 45.0 5.03e-01 75.0% 97.0%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.62 44.0 5.05e-01 89.8% 100.0%
1vf7F01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.61 42.0 4.61e-01 70.3% 100.0%
2ok7A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 47.0 4.96e-01 84.4% 92.0%
1g7sA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 45.0 4.83e-01 77.3% 96.3%
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 33.0 4.00e-01 84.4% 82.9%
5eanA01 2.40.30.270 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.58 43.0 4.58e-01 82.0% 89.8%
2qtlA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 45.0 4.85e-01 81.2% 100.0%
4dqlB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 45.0 4.90e-01 85.9% 98.2%
3gwqA01 2.40.37.20 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain 0.57 53.0 4.73e-01 100.0% 72.4%
5gxuB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 46.0 4.74e-01 86.7% 97.5%
2rc5B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 45.0 4.40e-01 84.4% 91.4%
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.56 31.0 3.49e-01 96.9% 69.4%
1vq8B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 44.0 4.36e-01 84.4% 88.3%
1vwxB02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 44.0 3.90e-01 84.4% 80.6%
1txkB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 37.0 3.90e-01 72.7% 88.7%
3k25A00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 36.0 2.82e-01 71.1% 85.8%
4ao5B01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.52 37.0 3.87e-01 90.6% 81.2%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4484838 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.98 93.0 8.29e-01 100.0% 74.5%
3740654 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.97 91.0 9.26e-01 100.0% 98.4%
4471646 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.97 94.0 8.78e-01 100.0% 84.7%
4261614 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.95 92.0 8.57e-01 100.0% 84.7%
4166021 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.95 85.0 8.85e-01 98.4% 99.2%
4385321 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.95 91.0 8.65e-01 100.0% 88.2%
4298206 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.94 86.0 8.84e-01 100.0% 99.2%
4089035 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.94 91.0 8.62e-01 100.0% 88.3%
4185528 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.94 85.0 8.81e-01 97.7% 100.0%
4250366 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.94 90.0 8.80e-01 100.0% 94.1%
4434412 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.93 89.0 8.47e-01 100.0% 87.5%
4424369 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.93 90.0 8.59e-01 100.0% 91.7%
4609381 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.93 89.0 8.42e-01 99.2% 86.9%
1140150 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.93 89.0 8.22e-01 100.0% 81.9%
4209875 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.93 86.0 8.41e-01 98.4% 90.4%
4550544 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.93 90.0 8.45e-01 100.0% 90.7%
4234818 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.93 88.0 8.61e-01 99.2% 92.6%
4548402 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.93 85.0 8.38e-01 100.0% 91.0%
4098901 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.93 88.0 8.09e-01 100.0% 80.6%
4395659 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.93 87.0 8.01e-01 100.0% 80.0%
4102477 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.92 85.0 8.72e-01 97.7% 99.2%
4049415 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.92 87.0 8.15e-01 98.4% 83.3%
4042623 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.92 88.0 8.29e-01 100.0% 85.3%
4033321 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.91 83.0 8.47e-01 100.0% 96.8%
4214954 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.90 83.0 8.51e-01 100.0% 99.2%
4177258 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.90 86.0 8.64e-01 100.0% 98.5%
4113789 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.90 75.0 7.99e-01 100.0% 98.2%
3718208 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.85 81.0 7.69e-01 100.0% 91.2%
4854958 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.78 45.0 5.12e-01 84.4% 75.0%
4197108 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.77 45.0 5.28e-01 84.4% 82.2%
4406651 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.76 63.0 6.75e-01 100.0% 100.0%
3977818 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.75 59.0 6.49e-01 95.3% 100.0%
4402716 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.74 45.0 5.41e-01 84.4% 90.6%
4010630 2004.1.1.10 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab 0.74 47.0 3.15e-01 85.9% 19.1%
4014420 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 48.0 5.46e-01 78.9% 95.8%
167387 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 44.0 4.27e-01 71.1% 90.8%
4623074 1.1.7.5 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.62 47.0 5.07e-01 88.3% 92.7%
3723475 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 45.0 4.51e-01 75.8% 90.8%
4934409 1.1.7.19 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.61 45.0 4.62e-01 75.8% 92.5%
4932728 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 44.0 4.69e-01 75.8% 94.8%
3929737 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.61 38.0 4.12e-01 93.0% 72.7%
5035699 1.1.7.2 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 0.59 45.0 3.32e-01 78.9% 86.9%
3972759 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 46.0 4.91e-01 85.9% 95.5%
3787437 1.1.7.2 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 0.58 45.0 3.16e-01 81.2% 81.2%
3761689 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 47.0 4.52e-01 85.9% 88.3%
3491307 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 46.0 4.48e-01 85.9% 97.9%
3601294 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 45.0 3.12e-01 84.4% 80.5%
4429657 1.1.7.2 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 0.56 45.0 3.27e-01 85.2% 84.6%
4447123 1.1.7.2 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 0.55 44.0 3.30e-01 84.4% 88.4%
3594697 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 45.0 4.54e-01 85.2% 88.8%
3830010 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.55 35.0 3.92e-01 96.9% 83.0%
4522567 11.1.1.33 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin 0.52 37.0 3.35e-01 75.0% 84.4%