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CAKLQF020000013.1__CAH1086889.1__SAMEA5780031_02522__00058
Bact-VirCAKLQF020000013.1__CAH1086889.1__SAMEA5780031_02522__00058
Identity
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 43-230_336-360
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00285.27 best | Citrate_synt | 204.3 | 4.00e-60 | 88.7% | 52.5% |
| PF00285.27 | Citrate_synt | 30.8 | 2.20e-07 | 12.7% | 7.6% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tqgB01 | 1.10.580.10 | Mainly Alpha › Orthogonal Bundle › Citrate Synthase; domain 1 › Citrate Synthase, domain 1 | 0.98 | 97.0 | 9.13e-01 | 100.0% | 88.2% |
| 1iomA01 | 1.10.580.10 | Mainly Alpha › Orthogonal Bundle › Citrate Synthase; domain 1 › Citrate Synthase, domain 1 | 0.96 | 93.0 | 8.86e-01 | 100.0% | 90.5% |
| 1nxeA02 | 1.10.580.10 | Mainly Alpha › Orthogonal Bundle › Citrate Synthase; domain 1 › Citrate Synthase, domain 1 | 0.94 | 91.0 | 8.47e-01 | 100.0% | 87.4% |
| 2ifcA01 | 1.10.580.10 | Mainly Alpha › Orthogonal Bundle › Citrate Synthase; domain 1 › Citrate Synthase, domain 1 | 0.93 | 91.0 | 8.57e-01 | 100.0% | 90.6% |
| 1cscA01 | 1.10.580.10 | Mainly Alpha › Orthogonal Bundle › Citrate Synthase; domain 1 › Citrate Synthase, domain 1 | 0.91 | 88.0 | 7.57e-01 | 100.0% | 75.9% |
| 6nmnA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.56 | 27.0 | 3.36e-01 | 77.5% | 72.7% |
| 2ky4A01 | 1.10.3130.20 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › Phycobilisome linker domain | 0.53 | 29.0 | 3.61e-01 | 75.6% | 83.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3261980 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.97 | 95.0 | 7.69e-01 | 100.0% | 93.2% |
| 4317006 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.96 | 94.0 | 7.43e-01 | 100.0% | 84.1% |
| 4354039 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.96 | 94.0 | 7.67e-01 | 100.0% | 90.9% |
| 5053439 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.96 | 94.0 | 7.27e-01 | 100.0% | 82.5% |
| 3284106 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.96 | 94.0 | 7.49e-01 | 100.0% | 87.6% |
| 3961726 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.96 | 94.0 | 7.45e-01 | 100.0% | 84.5% |
| 5020117 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.95 | 93.0 | 7.59e-01 | 100.0% | 92.0% |
| 164355 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.95 | 93.0 | 7.18e-01 | 100.0% | 82.3% |
| 3962601 | 172.1.1.0 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase | 0.95 | 93.0 | 7.07e-01 | 100.0% | 78.1% |
| 3185356 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.95 | 93.0 | 6.91e-01 | 100.0% | 76.0% |
| 3943299 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.95 | 93.0 | 7.09e-01 | 100.0% | 78.8% |
| 5038345 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.95 | 93.0 | 7.39e-01 | 100.0% | 84.9% |
| 176455 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.93 | 91.0 | 6.99e-01 | 100.0% | 76.4% |
| 4042210 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.93 | 90.0 | 6.88e-01 | 100.0% | 78.6% |
| 5025328 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.93 | 90.0 | 7.35e-01 | 100.0% | 91.5% |
| 4491555 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.93 | 90.0 | 6.92e-01 | 100.0% | 80.5% |
| 4027827 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.92 | 90.0 | 6.73e-01 | 100.0% | 78.6% |
| 3176977 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.92 | 89.0 | 6.72e-01 | 100.0% | 82.2% |
| 1507305 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.92 | 81.0 | 7.17e-01 | 90.1% | 69.0% |
| 3436663 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.91 | 88.0 | 6.68e-01 | 100.0% | 79.1% |
| 3595443 | 172.1.1.0 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase | 0.91 | 88.0 | 6.61e-01 | 100.0% | 81.1% |
| 165490 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.90 | 88.0 | 7.13e-01 | 100.0% | 84.4% |
| 4999876 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.86 | 83.0 | 6.73e-01 | 100.0% | 89.2% |
| 2625529 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.85 | 82.0 | 6.57e-01 | 100.0% | 81.8% |
| 4027902 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.84 | 81.0 | 6.35e-01 | 100.0% | 84.5% |
| 3281641 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.82 | 80.0 | 6.80e-01 | 100.0% | 92.1% |
| 3739635 | 5076.2.1.9 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › Choline_transpo | 0.56 | 41.0 | 3.35e-01 | 74.6% | 92.2% |
| 5053709 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.51 | 42.0 | 3.97e-01 | 87.3% | 99.2% |
D2
high
residues 245-331
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00285.27 best | Citrate_synt | 83.9 | 1.60e-23 | 100.0% | 25.6% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3o8jA02 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 1.00 | 98.0 | 9.22e-01 | 100.0% | 87.9% |
| 1vgpA02 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.95 | 90.0 | 8.41e-01 | 100.0% | 88.5% |
| 1a59A02 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.93 | 89.0 | 8.14e-01 | 100.0% | 88.9% |
| 2ibpA02 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.87 | 81.0 | 7.57e-01 | 100.0% | 88.7% |
| 1cscA02 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.82 | 76.0 | 6.96e-01 | 100.0% | 83.9% |
| 6wgyA02 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.80 | 74.0 | 7.02e-01 | 100.0% | 90.1% |
| 6hxlB01 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.77 | 70.0 | 6.26e-01 | 100.0% | 72.7% |
| 6hxpA01 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.77 | 70.0 | 6.72e-01 | 100.0% | 87.9% |
| 2wtbA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.62 | 44.0 | 3.05e-01 | 73.6% | 61.8% |
| 3o3mB01 | 1.20.1270.370 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 56.0 | 5.27e-01 | 100.0% | 90.3% |
| 3fnrA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.59 | 45.0 | 3.84e-01 | 82.8% | 89.0% |
| 6wh0A01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.56 | 42.0 | 3.54e-01 | 80.5% | 68.4% |
| 2yevA03 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.56 | 42.0 | 3.37e-01 | 81.6% | 90.8% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 37.0 | 4.09e-01 | 71.3% | 89.7% |
| 1h99A02 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.54 | 48.0 | 4.48e-01 | 98.9% | 80.2% |
| 1qqtA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.54 | 40.0 | 3.45e-01 | 79.3% | 61.6% |
| 3mesA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.51 | 40.0 | 2.83e-01 | 86.2% | 84.3% |
| 1ng6A02 | 1.10.10.410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 32.0 | 3.78e-01 | 81.6% | 98.2% |
| 2ox6D00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.50 | 44.0 | 3.57e-01 | 98.9% | 51.6% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3261980 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.97 | 89.0 | 5.60e-01 | 100.0% | 23.2% |
| 5038345 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.97 | 93.0 | 5.85e-01 | 100.0% | 23.5% |
| 5020117 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.97 | 93.0 | 5.89e-01 | 100.0% | 26.6% |
| 4317006 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.96 | 92.0 | 5.75e-01 | 100.0% | 22.7% |
| 3961726 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.95 | 91.0 | 5.73e-01 | 100.0% | 23.2% |
| 4354039 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.95 | 91.0 | 5.78e-01 | 100.0% | 25.1% |
| 5053439 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.94 | 91.0 | 5.58e-01 | 100.0% | 25.4% |
| 3962502 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.84 | 79.0 | 5.43e-01 | 100.0% | 34.6% |
| 4266117 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.83 | 77.0 | 5.70e-01 | 100.0% | 46.6% |
| 3284106 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.83 | 77.0 | 4.93e-01 | 100.0% | 24.6% |
| 4491555 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.82 | 74.0 | 4.71e-01 | 100.0% | 22.2% |
| 4952789 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.82 | 75.0 | 5.22e-01 | 100.0% | 37.4% |
| 3176977 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.82 | 74.0 | 4.63e-01 | 100.0% | 22.2% |
| 2625529 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.80 | 74.0 | 4.74e-01 | 100.0% | 24.3% |
| 3281641 | 172.1.1.1 ↗ | alpha complex topology › Citrate synthase-like › Citrate synthase › Citrate synthase › Citrate_synt | 0.79 | 69.0 | 4.63e-01 | 100.0% | 26.3% |
| 3960575 | 610.4.1.0 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain | 0.59 | 40.0 | 3.41e-01 | 70.1% | 54.7% |
| 4966460 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 46.0 | 4.39e-01 | 90.8% | 99.0% |
| 3475109 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.54 | 37.0 | 2.92e-01 | 72.4% | 46.2% |
| None | — | 0.53 | 40.0 | 2.55e-01 | 79.3% | 20.2% | |
| 3620174 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.53 | 42.0 | 4.20e-01 | 98.9% | 83.3% |
| None | — | 0.52 | 40.0 | 3.01e-01 | 81.6% | 42.4% | |
| 4278665 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.51 | 39.0 | 2.94e-01 | 80.5% | 41.9% |
| 4066781 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.51 | 42.0 | 3.23e-01 | 90.8% | 61.0% |
| 3222426 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 45.0 | 3.84e-01 | 100.0% | 77.9% |