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CAKLQF020000013.1__CAH1086935.1__SAMEA5780031_02543__00079

Bact-Vir

CAKLQF020000013.1__CAH1086935.1__SAMEA5780031_02543__00079

Identity

Kingdom:
phage

Quality

96.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-197
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03721.21 best UDPG_MGDP_dh_N 111.7 4.70e-32 93.8% 95.7%
D2 high residues 255-424
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF03720.23 best UDPG_MGDP_dh_C 82.3 4.10e-23 59.4% 99.0%
PF00984.25 UDPG_MGDP_dh 28.6 1.70e-06 22.4% 37.2%
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4xr9B02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.92 89.0 8.15e-01 100.0% 86.1%
4r16A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.90 83.0 7.96e-01 100.0% 85.7%
2o3jA03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.90 86.0 7.77e-01 100.0% 85.9%
3g79A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.90 86.0 7.38e-01 100.0% 72.5%
2y0eB03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.88 85.0 7.65e-01 100.0% 84.9%
3vtfA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.87 81.0 7.44e-01 100.0% 78.8%
3ojoB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 76.0 7.32e-01 100.0% 85.2%
1mv8A03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 80.0 7.50e-01 100.0% 85.1%
3plnA03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.82 61.0 6.46e-01 95.3% 84.4%
1dljA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.78 49.0 6.07e-01 70.0% 98.1%
2yfkA02 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.72 54.0 5.15e-01 77.6% 96.9%
3aogA03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 55.0 5.74e-01 78.8% 96.8%
5ceeA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 60.0 5.30e-01 99.4% 63.8%
5gudA03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 55.0 5.60e-01 78.8% 96.9%
3phhA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 50.0 5.66e-01 77.6% 93.8%
1bgvA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 54.0 5.49e-01 78.8% 97.0%
1npdB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 53.0 5.68e-01 78.2% 100.0%
1nytA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 52.0 5.70e-01 77.6% 94.4%
4ccsA02 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.69 49.0 5.63e-01 100.0% 100.0%
4b4uB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 48.0 5.39e-01 78.8% 91.7%
5dzsB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 51.0 5.78e-01 78.2% 100.0%
4hy3A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 60.0 5.83e-01 99.4% 85.9%
3wnvA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 59.0 5.70e-01 99.4% 84.9%
2eklA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 59.0 5.70e-01 96.5% 83.8%
1np3B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 47.0 4.61e-01 75.9% 67.6%
4g2nA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 59.0 5.80e-01 99.4% 87.9%
3d6jA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.66 46.0 4.97e-01 70.6% 94.4%
2yfqB03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 50.0 5.55e-01 78.8% 96.4%
1tjyA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 50.0 5.27e-01 100.0% 87.6%
2d0iA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 59.0 5.63e-01 95.3% 85.9%
2gsdA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 59.0 5.64e-01 99.4% 84.4%
4n03A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 49.0 4.87e-01 100.0% 75.0%
4ofzA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.64 51.0 4.73e-01 83.5% 89.4%
2b30A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.64 46.0 4.60e-01 73.5% 88.0%
2cftA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.64 47.0 4.78e-01 75.9% 89.9%
1jilA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 45.0 4.16e-01 72.4% 97.3%
5oesA04 3.40.50.1760 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic 0.63 45.0 5.22e-01 80.0% 100.0%
5z5cA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 39.0 4.75e-01 88.2% 96.3%
2j5bB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 45.0 4.27e-01 71.8% 95.4%
3fzqB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.63 43.0 4.54e-01 70.0% 87.9%
2ahuA01 3.40.1080.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase 0.63 46.0 3.92e-01 75.9% 85.7%
1vbkA02 3.30.2300.10 Alpha Beta › 2-Layer Sandwich › THUMP fold › THUMP superfamily 0.63 32.0 4.40e-01 79.4% 100.0%
4irxA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 49.0 5.02e-01 99.4% 85.1%
1bapA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 50.0 5.09e-01 99.4% 85.6%
3r4cA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.62 43.0 4.41e-01 70.6% 86.8%
1zkdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 57.0 5.72e-01 100.0% 97.1%
1ri5A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 55.0 4.80e-01 94.7% 98.0%
1pzmA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 48.0 4.88e-01 94.1% 81.2%
4qttB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 55.0 5.52e-01 97.1% 97.1%
4nv0A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.60 47.0 4.30e-01 80.0% 85.3%
4qjbB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.60 42.0 4.30e-01 70.0% 89.4%
7en7A01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.60 45.0 4.44e-01 91.8% 72.0%
1ej6A04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 50.0 4.50e-01 91.2% 96.5%
3e4cB00 3.40.50.1460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 43.0 3.65e-01 76.5% 71.4%
4m9rB00 3.40.50.1460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 44.0 4.00e-01 82.4% 96.9%
2dgmA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.55 49.0 4.11e-01 96.5% 69.4%
1ti2A03 3.40.228.10 Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 0.55 41.0 3.42e-01 75.9% 73.6%
2xzmK00 3.30.420.80 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 0.54 33.0 3.65e-01 79.4% 73.6%
2nyuB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 50.0 4.92e-01 99.4% 95.6%
3douA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 49.0 4.89e-01 98.2% 94.9%
2f48A02 3.40.50.460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphofructokinase domain 0.52 38.0 3.69e-01 73.5% 71.3%
1fcdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 38.0 4.17e-01 94.7% 92.8%
5jgjA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 48.0 4.30e-01 98.8% 98.3%
1xrsA00 3.20.20.440 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › D-Lysine 5,6-aminomutase alpha subunit 0.52 42.0 2.99e-01 85.9% 76.7%
1ogyA02 3.40.50.740 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 47.0 4.02e-01 100.0% 71.2%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4660338 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 1.00 75.0 8.72e-01 76.5% 100.0%
4179243 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.94 73.0 8.11e-01 78.8% 99.3%
4945020 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.92 71.0 7.75e-01 78.8% 98.6%
5027490 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.92 69.0 7.53e-01 76.5% 97.2%
4941898 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.92 70.0 7.47e-01 77.6% 92.7%
4949624 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.92 69.0 7.68e-01 77.1% 99.3%
1507352 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.91 69.0 7.46e-01 77.1% 97.9%
4958180 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.90 70.0 7.25e-01 79.4% 86.9%
5077210 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.90 68.0 7.40e-01 77.6% 96.6%
4974484 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.89 69.0 7.49e-01 78.8% 95.9%
4976364 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.89 68.0 7.35e-01 77.6% 97.2%
4962027 2003.1.1.380 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › UDPG_MGDP_dh_C 0.89 72.0 7.36e-01 84.7% 85.5%
5080305 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.89 67.0 7.48e-01 77.1% 96.4%
4993834 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.89 66.0 7.60e-01 75.9% 100.0%
5013793 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.89 68.0 7.56e-01 82.4% 95.7%
5052247 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.89 67.0 7.31e-01 77.6% 96.6%
5047759 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.88 68.0 7.50e-01 78.2% 96.4%
5076582 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.88 66.0 7.07e-01 76.5% 98.0%
5043965 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.88 83.0 8.35e-01 97.1% 97.6%
4990593 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.88 68.0 7.47e-01 78.2% 95.7%
3283562 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.88 85.0 6.04e-01 100.0% 40.2%
4960590 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.88 63.0 7.04e-01 77.1% 91.1%
5027161 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.88 67.0 6.98e-01 78.2% 93.1%
5032362 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.88 67.0 7.32e-01 77.6% 99.3%
4474760 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.88 83.0 8.35e-01 99.4% 97.6%
3720306 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.87 66.0 6.61e-01 77.6% 92.6%
3241628 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.87 67.0 6.92e-01 78.2% 93.1%
4965363 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.87 76.0 7.99e-01 92.4% 98.7%
3969857 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.87 63.0 7.38e-01 74.7% 100.0%
3293375 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.87 66.0 6.57e-01 77.6% 90.9%
4450742 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.87 71.0 7.38e-01 84.1% 93.1%
4987347 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.87 65.0 7.25e-01 75.9% 97.8%
4978143 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.86 63.0 7.19e-01 77.1% 96.9%
4999362 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.86 74.0 7.74e-01 100.0% 96.1%
4967899 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.86 65.0 7.19e-01 77.1% 96.4%
3715027 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.86 66.0 6.39e-01 78.2% 93.5%
4956207 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.86 66.0 6.87e-01 78.8% 85.0%
4946259 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.86 64.0 7.04e-01 75.9% 97.1%
5017129 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.86 66.0 7.22e-01 78.2% 96.4%
4075147 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.86 64.0 6.51e-01 75.9% 80.6%
4985193 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.86 64.0 7.19e-01 76.5% 98.5%
4972370 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.86 65.0 7.09e-01 78.2% 94.5%
5046844 2003.1.1.45 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › UDPG_MGDP_dh_N 0.86 83.0 5.90e-01 100.0% 39.5%
3953035 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.86 64.0 7.04e-01 77.1% 94.4%
4974498 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.85 65.0 7.17e-01 77.6% 95.7%
4980999 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.85 63.0 6.94e-01 75.3% 95.0%
4265868 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.84 71.0 6.87e-01 95.3% 80.0%
3961575 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.84 59.0 6.77e-01 80.0% 93.8%
152580 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.84 59.0 6.83e-01 75.3% 96.8%
5056136 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.84 63.0 7.11e-01 78.2% 97.8%
4954499 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.83 69.0 7.31e-01 84.7% 98.0%
1506928 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.83 63.0 6.60e-01 77.6% 93.0%
4938353 2003.1.12.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain 0.83 47.0 6.20e-01 72.4% 100.0%
4531635 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.82 61.0 7.00e-01 85.3% 100.0%
5074310 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.81 51.0 6.41e-01 72.4% 100.0%
3988553 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.81 61.0 6.78e-01 78.2% 96.3%
3946563 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.81 58.0 6.72e-01 95.3% 100.0%
4977831 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.79 54.0 6.27e-01 75.9% 93.6%
4967281 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.77 59.0 5.75e-01 78.8% 84.3%
4949013 2003.1.12.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C 0.77 61.0 6.41e-01 100.0% 89.6%
3367019 2003.1.12.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C, UDPG_MGDP_dh_N 0.74 67.0 5.70e-01 94.1% 88.2%
3602125 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.73 67.0 4.92e-01 97.1% 97.1%
4927509 2007.1.14.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like 0.72 46.0 5.62e-01 75.3% 99.1%
4620379 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.71 51.0 5.31e-01 77.1% 78.5%
4022010 2003.1.5.246 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12, KR 0.69 56.0 3.79e-01 84.7% 37.9%
3641121 2003.1.1.37 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C 0.68 61.0 5.83e-01 99.4% 83.7%
2523279 2003.1.1.37 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C 0.68 61.0 5.65e-01 96.5% 77.1%
3408318 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.66 49.0 4.34e-01 75.9% 57.4%
3700367 2003.1.5.26 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_28 0.66 60.0 4.42e-01 98.2% 82.6%
4028553 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.65 48.0 4.59e-01 75.9% 70.8%
4948419 2003.1.12.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh 0.64 48.0 5.44e-01 95.3% 97.0%
4032871 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.64 46.0 5.06e-01 94.1% 90.7%
4988570 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.64 42.0 4.86e-01 100.0% 93.3%
3272042 2003.1.5.246 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12, KR 0.64 56.0 3.86e-01 93.5% 45.4%
3716583 2006.1.1.37 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.63 44.0 3.62e-01 70.0% 87.8%
5075261 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.62 57.0 4.81e-01 98.2% 86.9%
3935433 2003.1.1.136 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SRR1 0.62 51.0 5.42e-01 97.1% 98.0%
5045776 7601.1.1.2 a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › DUF362 0.62 57.0 4.62e-01 100.0% 96.2%
5674 4143.1.1.1 a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.61 34.0 4.31e-01 98.2% 91.8%
4295057 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.61 43.0 3.67e-01 71.2% 93.0%
4979031 7601.1.1.2 a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › DUF362 0.60 56.0 4.51e-01 100.0% 98.4%
3502492 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.59 49.0 3.28e-01 98.8% 22.9%
4358825 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.58 41.0 4.40e-01 71.2% 93.8%
3789049 2003.1.5.99 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › SRR1 0.58 51.0 5.11e-01 94.7% 98.3%
3259105 2003.1.5.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 0.57 48.0 5.01e-01 95.9% 98.1%
4252136 2007.1.6.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH 0.55 41.0 4.59e-01 81.2% 100.0%
3590490 2006.1.1.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like 0.55 48.0 4.86e-01 100.0% 94.1%
4565835 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.55 48.0 4.81e-01 100.0% 92.9%
4336497 3269.1.1.1 alpha arrays › D-ornithine aminomutase S component-related › D-ornithine aminomutase S component-related › D-ornithine aminomutase S component-related › Lys-AminoMut_A 0.54 43.0 3.13e-01 86.5% 78.0%
3263243 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.53 41.0 3.87e-01 79.4% 83.5%
D3 medium residues 200-254
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00984.25 best UDPG_MGDP_dh 54.3 1.60e-14 96.4% 48.9%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dliA03 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.86 67.0 5.64e-01 83.6% 53.3%
4dllB02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.82 73.0 5.52e-01 100.0% 46.9%
2uyyA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.82 72.0 5.51e-01 98.2% 48.0%
3g0oA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.78 68.0 5.27e-01 98.2% 95.0%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.58 39.0 3.97e-01 70.9% 80.0%
4e4yA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 48.0 3.13e-01 94.5% 62.4%
1mgtA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.32e-01 72.7% 51.9%
3cm0A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 37.0 2.70e-01 83.6% 39.1%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5043964 2003.1.1.45 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › UDPG_MGDP_dh_N 0.98 93.0 5.61e-01 100.0% 19.3%
3948739 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.98 93.0 5.59e-01 100.0% 18.6%
4927679 129.1.1.3 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › UDPG_MGDP_dh 0.97 82.0 6.38e-01 89.1% 46.7%
5032361 129.1.1.3 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › UDPG_MGDP_dh 0.97 87.0 7.14e-01 94.5% 57.8%
None 0.96 91.0 5.55e-01 100.0% 19.6%
1260707 129.1.1.3 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › UDPG_MGDP_dh 0.95 90.0 7.00e-01 100.0% 52.4%
5047758 2003.1.1.45 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › UDPG_MGDP_dh_N 0.94 87.0 5.29e-01 100.0% 18.6%
4945019 2003.1.1.370 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › UDPG_MGDP_dh 0.91 84.0 5.09e-01 100.0% 17.7%
53226 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.90 81.0 6.55e-01 98.2% 57.1%
4999361 2003.1.1.45 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › UDPG_MGDP_dh_N 0.89 79.0 4.89e-01 96.4% 19.3%
3988539 129.1.1.3 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › UDPG_MGDP_dh 0.86 68.0 5.84e-01 89.1% 55.3%
4946258 129.1.1.113 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › UDPG_MGDP_dh_C 0.86 73.0 6.02e-01 92.7% 55.8%
4036152 129.1.1.3 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › UDPG_MGDP_dh 0.85 77.0 6.13e-01 100.0% 54.3%
1903656 129.1.1.16 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_11 0.83 73.0 5.60e-01 100.0% 48.8%
1900779 129.1.1.16 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_11 0.82 73.0 5.54e-01 100.0% 47.7%
4930432 2003.1.1.45 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › UDPG_MGDP_dh_N 0.82 72.0 4.52e-01 100.0% 46.0%
3681230 129.1.1.16 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_11 0.80 66.0 4.92e-01 90.9% 41.5%
3782621 129.1.1.16 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_11 0.80 65.0 4.75e-01 89.1% 37.9%
4021800 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.78 68.0 5.10e-01 100.0% 43.7%
3735701 129.1.1.16 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_11 0.77 67.0 5.07e-01 100.0% 44.0%