Back to structures

CAKLQF020000013.1__CAH1086984.1__SAMEA5780031_02576__00112

Bact-Vir

CAKLQF020000013.1__CAH1086984.1__SAMEA5780031_02576__00112

Identity

Kingdom:
phage

Quality

89.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-168
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01252.24 best Peptidase_A8 152.0 1.80e-44 97.3% 99.3%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kmfA01 1.20.58.810 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 0.75 45.0 5.33e-01 70.7% 85.3%
1yjgA00 1.20.120.240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 0.70 49.0 4.80e-01 71.4% 82.2%
1sziA02 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.67 47.0 4.85e-01 72.1% 75.9%
1y4cA03 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.67 41.0 4.63e-01 71.4% 78.8%
1i5nB00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.67 38.0 4.11e-01 71.4% 64.5%
3kyiA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.66 39.0 4.20e-01 72.1% 66.4%
7sf7A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.63 44.0 3.62e-01 72.1% 42.4%
6i9kA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.63 51.0 3.88e-01 86.4% 39.7%
4xt1A00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.60 48.0 3.84e-01 85.7% 91.8%
4gycA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.54 43.0 3.80e-01 85.0% 99.1%
2b5dX01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.52 45.0 3.30e-01 93.2% 66.1%
6nmnA02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.52 34.0 3.66e-01 70.1% 75.8%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4262818 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.97 95.0 9.20e-01 100.0% 93.1%
4376710 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.96 89.0 8.14e-01 94.6% 95.0%
4307493 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.96 94.0 8.99e-01 100.0% 91.4%
4246319 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.96 93.0 9.01e-01 100.0% 91.9%
3588166 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.96 90.0 8.89e-01 100.0% 92.2%
4338968 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.95 88.0 8.91e-01 98.6% 96.6%
4289590 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.95 93.0 8.71e-01 100.0% 88.2%
4074201 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.95 87.0 8.86e-01 97.3% 95.9%
4229458 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.95 87.0 8.79e-01 100.0% 95.2%
4401093 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.95 88.0 8.81e-01 100.0% 94.0%
4672303 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.94 92.0 8.82e-01 100.0% 91.4%
4534075 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.94 90.0 8.68e-01 100.0% 90.0%
4427439 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.94 91.0 8.61e-01 100.0% 91.8%
4558116 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.94 91.0 9.11e-01 100.0% 98.6%
4091257 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.94 89.0 8.75e-01 100.0% 92.9%
4492762 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.93 91.0 8.70e-01 100.0% 90.9%
4245681 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.93 91.0 8.67e-01 100.0% 89.1%
4681706 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.93 90.0 8.62e-01 100.0% 92.1%
4206375 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.93 90.0 8.81e-01 100.0% 94.2%
4296172 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.93 88.0 8.65e-01 100.0% 92.9%
4364905 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.92 89.0 8.52e-01 100.0% 89.7%
4579706 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.92 88.0 8.43e-01 100.0% 88.5%
4465692 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.92 89.0 8.52e-01 100.0% 92.1%
3285951 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.91 89.0 8.75e-01 100.0% 96.1%
4179280 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.91 88.0 8.22e-01 100.0% 91.4%
4115183 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.91 86.0 8.44e-01 100.0% 92.3%
4075937 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.91 88.0 8.26e-01 100.0% 85.9%
4102276 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.91 88.0 8.53e-01 100.0% 96.9%
4585970 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.90 84.0 8.40e-01 100.0% 94.0%
2570541 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.90 87.0 8.29e-01 100.0% 89.0%
4338739 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.90 86.0 8.34e-01 100.0% 91.3%
4611338 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.90 87.0 8.53e-01 100.0% 94.8%
4177137 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.89 85.0 7.60e-01 99.3% 94.9%
4285363 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.89 85.0 8.16e-01 100.0% 92.7%
4176128 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.88 85.0 8.02e-01 100.0% 89.4%
4643353 1046.1.1.1 alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 0.87 79.0 7.69e-01 100.0% 88.0%
3540099 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.68 48.0 4.50e-01 72.1% 90.6%
3770671 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.68 48.0 3.57e-01 72.1% 39.4%
3768053 3684.1.1.0 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.67 47.0 4.65e-01 72.1% 82.6%
4378856 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.66 48.0 3.52e-01 74.1% 73.8%
3521923 5001.1.1.11 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_4 0.65 49.0 3.80e-01 87.1% 37.1%
3277459 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.65 53.0 3.92e-01 85.7% 39.2%
3910430 611.8.1.1 alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › Ariadne 0.63 44.0 4.24e-01 71.4% 81.8%
3270712 5001.1.1.148 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Frizzled, PF29575 0.62 50.0 3.67e-01 84.4% 36.3%
3266303 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.62 52.0 3.78e-01 86.4% 36.7%
3303028 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.61 43.0 4.31e-01 74.1% 69.0%
3844725 5001.1.1.11 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_4 0.60 45.0 3.47e-01 85.7% 35.2%
5011612 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.57 39.0 4.12e-01 70.1% 87.7%