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CAKLQF020000014.1__CAH1087086.1__SAMEA5780031_02583__00004
Bact-VirCAKLQF020000014.1__CAH1087086.1__SAMEA5780031_02583__00004
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 29-196
Domain cluster:
rep: CAKLQF020000021.1__CAH1090700.1__SAMEA5780031_03238__00060__D31-228
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03573.20 best | OprD | 36.8 | 3.40e-09 | 100.0% | 38.7% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3sybA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.92 | 74.0 | 5.29e-01 | 100.0% | 33.8% |
| 4frxA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.88 | 80.0 | 5.80e-01 | 100.0% | 39.6% |
| 3jtyB01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.88 | 82.0 | 6.01e-01 | 100.0% | 42.5% |
| 7vu0A01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.86 | 83.0 | 5.90e-01 | 100.0% | 41.5% |
| 5dl8A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.86 | 83.0 | 6.05e-01 | 100.0% | 43.7% |
| 5dl7A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.86 | 83.0 | 6.01e-01 | 100.0% | 43.0% |
| 5dl5A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.85 | 82.0 | 5.86e-01 | 100.0% | 67.3% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.70 | 33.0 | 4.80e-01 | 85.1% | 98.7% |
| 4afkA00 | 2.40.160.100 | Mainly Beta › Beta Barrel › Porin › | 0.69 | 66.0 | 4.76e-01 | 100.0% | 46.5% |
| 3sy9C01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.68 | 65.0 | 4.87e-01 | 98.8% | 79.9% |
| 5fokA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.63 | 59.0 | 4.07e-01 | 99.4% | 50.4% |
| 2w16A03 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.63 | 59.0 | 4.04e-01 | 100.0% | 42.4% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 38.0 | 3.97e-01 | 97.0% | 66.7% |
| 2f1cX00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.62 | 57.0 | 4.90e-01 | 97.6% | 65.9% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 36.0 | 3.91e-01 | 96.4% | 68.1% |
| 3qlbA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.61 | 57.0 | 3.93e-01 | 100.0% | 42.0% |
| 6wimA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.61 | 56.0 | 4.35e-01 | 100.0% | 61.2% |
| 1yc9A02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.61 | 31.0 | 4.35e-01 | 78.0% | 100.0% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.59 | 36.0 | 3.80e-01 | 94.0% | 65.8% |
| 8p97A01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.57 | 53.0 | 3.58e-01 | 100.0% | 33.3% |
| 3cslA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.55 | 50.0 | 3.38e-01 | 100.0% | 44.2% |
| 5azpA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.54 | 28.0 | 3.78e-01 | 78.0% | 100.0% |
| 1uynX00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.54 | 46.0 | 3.91e-01 | 96.4% | 55.9% |
| 1dwnA00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.53 | 33.0 | 3.73e-01 | 100.0% | 81.9% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3966107 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.89 | 86.0 | 6.02e-01 | 100.0% | 39.9% |
| 1307904 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.88 | 80.0 | 5.77e-01 | 100.0% | 39.1% |
| 3966214 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.88 | 86.0 | 6.17e-01 | 100.0% | 43.0% |
| 3969139 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.88 | 85.0 | 5.99e-01 | 100.0% | 38.7% |
| 3966665 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.88 | 85.0 | 6.02e-01 | 100.0% | 39.9% |
| 3970069 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.88 | 84.0 | 6.12e-01 | 100.0% | 42.0% |
| 3945018 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.87 | 84.0 | 6.09e-01 | 98.8% | 69.0% |
| 3506543 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.87 | 83.0 | 5.90e-01 | 100.0% | 40.0% |
| 3968316 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.87 | 84.0 | 5.90e-01 | 100.0% | 41.1% |
| 1734925 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.86 | 83.0 | 6.01e-01 | 100.0% | 43.0% |
| 1734923 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.85 | 82.0 | 5.87e-01 | 100.0% | 67.5% |
| 4009827 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.83 | 80.0 | 5.84e-01 | 100.0% | 42.8% |
| 3056279 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.61 | 36.0 | 3.67e-01 | 96.4% | 58.3% |
| 3890886 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 27.0 | 3.75e-01 | 90.5% | 88.7% |
| 3385526 | 5084.10.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD | 0.58 | 54.0 | 3.78e-01 | 100.0% | 37.0% |
| 4098598 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.57 | 53.0 | 3.69e-01 | 100.0% | 40.0% |
| 4188949 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.55 | 51.0 | 3.53e-01 | 100.0% | 38.7% |
| 885 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.54 | 46.0 | 3.91e-01 | 96.4% | 55.9% |
| 3782878 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.54 | 49.0 | 3.84e-01 | 100.0% | 63.9% |
| 4379627 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.53 | 49.0 | 3.94e-01 | 98.2% | 69.4% |
| 4162922 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.53 | 48.0 | 3.87e-01 | 97.0% | 58.4% |
| 4956107 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.53 | 30.0 | 3.45e-01 | 92.9% | 75.8% |
| 4979864 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.53 | 31.0 | 3.40e-01 | 92.9% | 71.1% |
| 4055728 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.52 | 47.0 | 3.80e-01 | 100.0% | 67.6% |
| 4677413 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.52 | 47.0 | 3.79e-01 | 96.4% | 55.9% |
| 4038477 | 5084.3.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 | 0.52 | 47.0 | 3.83e-01 | 98.2% | 68.3% |
| 4946617 | 512.1.1.5 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_3rd | 0.52 | 31.0 | 3.64e-01 | 92.9% | 85.2% |
| 3386238 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.51 | 46.0 | 3.69e-01 | 97.0% | 55.6% |
| 3875620 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.51 | 33.0 | 3.18e-01 | 79.2% | 57.4% |
D2
medium
residues 197-359
Domain cluster:
rep: CAKLQF020000032.1__CAH1095015.1__SAMEA5780031_03850__00006__D208-349
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5dl8A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.93 | 76.0 | 5.44e-01 | 100.0% | 34.8% |
| 3jtyB01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.89 | 75.0 | 5.46e-01 | 100.0% | 37.2% |
| 3sy9C01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.89 | 73.0 | 5.49e-01 | 100.0% | 39.4% |
| 5dl5A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.84 | 80.0 | 5.67e-01 | 100.0% | 38.7% |
| 4frxA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.83 | 80.0 | 5.80e-01 | 100.0% | 41.4% |
| 4bumX00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.82 | 51.0 | 4.11e-01 | 100.0% | 36.0% |
| 1bh3A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.81 | 54.0 | 4.32e-01 | 100.0% | 38.1% |
| 2joxA00 | 2.60.40.4240 | Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill | 0.73 | 34.0 | 4.22e-01 | 96.3% | 68.9% |
| 2wjqA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.70 | 51.0 | 4.69e-01 | 96.3% | 59.5% |
| 4afkA00 | 2.40.160.100 | Mainly Beta › Beta Barrel › Porin › | 0.68 | 64.0 | 4.63e-01 | 100.0% | 44.2% |
| 8p97A01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.67 | 59.0 | 3.87e-01 | 100.0% | 24.6% |
| 2f1cX00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.66 | 53.0 | 4.51e-01 | 98.8% | 54.0% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.65 | 39.0 | 4.13e-01 | 83.4% | 65.3% |
| 3qlbA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.65 | 63.0 | 4.20e-01 | 100.0% | 35.5% |
| 1nqfA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.65 | 57.0 | 4.14e-01 | 99.4% | 36.2% |
| 1kmoA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.65 | 62.0 | 4.19e-01 | 100.0% | 32.8% |
| 1fw3A00 | 2.40.230.10 | Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 | 0.64 | 46.0 | 3.92e-01 | 96.9% | 47.2% |
| 2w16A03 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.64 | 55.0 | 3.73e-01 | 98.8% | 27.3% |
| 6fokB01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.63 | 60.0 | 3.92e-01 | 100.0% | 29.2% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.63 | 60.0 | 3.89e-01 | 100.0% | 27.1% |
| 1tlyA00 | 2.40.230.20 | Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like | 0.62 | 55.0 | 4.69e-01 | 97.5% | 60.2% |
| 3v89A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.62 | 59.0 | 3.88e-01 | 99.4% | 29.8% |
| 2vdfA00 | 2.40.128.100 | Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin | 0.61 | 50.0 | 4.44e-01 | 94.5% | 61.3% |
| 6wimA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.61 | 56.0 | 4.29e-01 | 98.8% | 48.1% |
| 1af6A00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.61 | 57.0 | 4.09e-01 | 98.2% | 38.0% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.61 | 41.0 | 4.38e-01 | 88.3% | 76.2% |
| 1a0sP00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.60 | 56.0 | 4.06e-01 | 97.5% | 40.4% |
| 1t16A00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.60 | 55.0 | 4.00e-01 | 98.8% | 41.0% |
| 6f1uK02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.59 | 39.0 | 4.15e-01 | 88.3% | 75.9% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 33.0 | 3.50e-01 | 95.7% | 60.1% |
| 4e1sA00 | 2.40.160.160 | Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain | 0.58 | 53.0 | 4.60e-01 | 97.5% | 69.0% |
| 3kvnA02 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.57 | 52.0 | 4.14e-01 | 96.3% | 51.3% |
| 1xkwA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.57 | 53.0 | 3.67e-01 | 100.0% | 36.4% |
| 3fidA00 | 2.40.128.140 | Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein | 0.57 | 50.0 | 4.03e-01 | 96.9% | 51.0% |
| 4c00A04 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.56 | 52.0 | 4.13e-01 | 98.8% | 51.9% |
| 2q03A00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.54 | 38.0 | 4.21e-01 | 89.0% | 88.0% |
| 1nqnA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.54 | 33.0 | 3.80e-01 | 90.8% | 83.1% |
| 1i78B00 | 2.40.128.90 | Mainly Beta › Beta Barrel › Lipocalin › OMPT-like | 0.54 | 48.0 | 3.92e-01 | 94.5% | 64.8% |
| 3pgbA01 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 37.0 | 2.65e-01 | 74.8% | 77.0% |
| 1d6uA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 37.0 | 2.79e-01 | 73.6% | 95.9% |
| 4rlcA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 34.0 | 3.70e-01 | 83.4% | 80.7% |
| 2ervA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 38.0 | 3.95e-01 | 92.0% | 82.7% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970069 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.91 | 73.0 | 5.27e-01 | 100.0% | 33.9% |
| 3969139 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.89 | 75.0 | 5.26e-01 | 100.0% | 31.9% |
| 3968316 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.89 | 77.0 | 5.35e-01 | 100.0% | 32.6% |
| 3601683 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.87 | 57.0 | 4.49e-01 | 100.0% | 35.5% |
| 3385986 | 5084.3.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta | 0.83 | 51.0 | 4.78e-01 | 100.0% | 51.5% |
| 3838584 | 5084.5.1.25 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › HP_OMP_2 | 0.78 | 72.0 | 5.04e-01 | 100.0% | 34.5% |
| None | — | 0.77 | 62.0 | 4.25e-01 | 100.0% | 27.8% | |
| 4049663 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.77 | 48.0 | 3.45e-01 | 96.9% | 24.0% |
| 3947597 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.77 | 61.0 | 4.85e-01 | 100.0% | 44.7% |
| 2321077 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.76 | 59.0 | 4.53e-01 | 98.8% | 39.8% |
| 3839454 | 5084.5.1.25 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › HP_OMP_2 | 0.76 | 72.0 | 5.11e-01 | 100.0% | 37.7% |
| 3644755 | 5084.5.1.23 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › TOC159_MAD | 0.76 | 51.0 | 4.00e-01 | 100.0% | 35.6% |
| 3965708 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.75 | 58.0 | 4.95e-01 | 100.0% | 53.8% |
| 3838130 | 5084.5.1.25 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › HP_OMP_2 | 0.75 | 71.0 | 4.97e-01 | 100.0% | 36.2% |
| 4339571 | 5084.5.4.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein | 0.74 | 56.0 | 3.96e-01 | 98.8% | 28.9% |
| 4591679 | 5084.5.1.18 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C | 0.73 | 57.0 | 4.26e-01 | 99.4% | 36.1% |
| 4241280 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.71 | 57.0 | 4.04e-01 | 100.0% | 29.8% |
| 3968806 | 5084.5.1.68 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27733 | 0.70 | 47.0 | 4.28e-01 | 96.3% | 52.9% |
| 4622073 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.69 | 59.0 | 4.56e-01 | 98.8% | 44.3% |
| 4083193 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.69 | 65.0 | 4.36e-01 | 100.0% | 32.6% |
| 1760440 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.67 | 59.0 | 4.03e-01 | 98.8% | 29.4% |
| 4643038 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.67 | 63.0 | 4.26e-01 | 100.0% | 35.0% |
| 3967320 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.66 | 59.0 | 4.39e-01 | 100.0% | 41.1% |
| 4188949 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.65 | 62.0 | 4.16e-01 | 100.0% | 30.2% |
| 3970531 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.65 | 62.0 | 4.04e-01 | 100.0% | 30.5% |
| 4440914 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.65 | 62.0 | 3.96e-01 | 100.0% | 29.3% |
| 1716634 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.65 | 62.0 | 4.18e-01 | 100.0% | 32.5% |
| 3839880 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.64 | 61.0 | 4.01e-01 | 100.0% | 37.3% |
| 3971597 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.63 | 58.0 | 4.50e-01 | 98.8% | 53.6% |
| 4098598 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.63 | 58.0 | 4.04e-01 | 100.0% | 33.5% |
| 3948040 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.63 | 56.0 | 4.22e-01 | 98.2% | 42.9% |
| 2755875 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.63 | 59.0 | 4.02e-01 | 99.4% | 33.1% |
| 3942118 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.63 | 58.0 | 4.16e-01 | 97.5% | 49.4% |
| 3387592 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.62 | 58.0 | 4.45e-01 | 100.0% | 48.6% |
| 2841805 | 5084.5.3.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › MtrB_PioB | 0.62 | 60.0 | 3.83e-01 | 100.0% | 27.7% |
| 4668983 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.62 | 45.0 | 4.57e-01 | 89.6% | 75.0% |
| 1760802 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.62 | 59.0 | 4.13e-01 | 100.0% | 39.6% |
| 4025861 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.61 | 46.0 | 4.53e-01 | 89.6% | 72.9% |
| 4183859 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.61 | 57.0 | 4.26e-01 | 98.8% | 48.4% |
| 3387633 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.60 | 56.0 | 4.41e-01 | 98.8% | 50.9% |
| 3964572 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.60 | 49.0 | 3.95e-01 | 96.3% | 47.1% |
| 3979621 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.60 | 54.0 | 4.30e-01 | 96.3% | 50.8% |
| 4677412 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.60 | 55.0 | 4.25e-01 | 96.3% | 51.4% |
| 3969607 | 5084.1.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg | 0.60 | 55.0 | 4.32e-01 | 96.9% | 54.0% |
| 3484227 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.60 | 40.0 | 4.02e-01 | 89.6% | 65.9% |
| 4399548 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.59 | 55.0 | 4.13e-01 | 99.4% | 47.2% |
| 2103480 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.59 | 54.0 | 4.40e-01 | 96.9% | 58.4% |
| 3875809 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.59 | 42.0 | 4.24e-01 | 88.3% | 71.5% |
| 3611705 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.59 | 55.0 | 4.12e-01 | 98.8% | 52.2% |
| 3100974 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.59 | 56.0 | 5.09e-01 | 100.0% | 84.6% |
| 4010029 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.58 | 53.0 | 4.23e-01 | 95.7% | 52.8% |
| 4670451 | 5084.5.4.9 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › UPF0164 | 0.58 | 54.0 | 4.18e-01 | 97.5% | 50.3% |
| 3534691 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.58 | 40.0 | 4.07e-01 | 87.1% | 69.1% |
| 4027955 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.58 | 53.0 | 4.05e-01 | 97.5% | 54.7% |
| 3594654 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.58 | 54.0 | 4.07e-01 | 98.8% | 51.6% |
| 4039744 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.58 | 53.0 | 4.14e-01 | 96.9% | 48.3% |
| 5009702 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.56 | 35.0 | 3.74e-01 | 95.7% | 70.7% |
| 4191031 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.56 | 51.0 | 4.08e-01 | 96.3% | 54.5% |
| 3387574 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.56 | 50.0 | 4.00e-01 | 95.7% | 55.2% |
| 4102065 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.55 | 50.0 | 4.13e-01 | 95.7% | 57.1% |
| 3963279 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.55 | 50.0 | 4.02e-01 | 98.8% | 52.7% |
| 4669372 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.55 | 49.0 | 3.94e-01 | 96.3% | 56.5% |
| 382272 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.54 | 47.0 | 3.76e-01 | 92.6% | 62.9% |
| 4926981 | 9.13.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like | 0.54 | 36.0 | 4.08e-01 | 92.0% | 88.0% |
| 5081121 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.53 | 47.0 | 4.62e-01 | 93.3% | 86.9% |
| 4971555 | 9.13.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 | 0.53 | 41.0 | 4.41e-01 | 88.3% | 91.0% |
| 3838109 | 5084.9.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Lipid A deacylase LpxR › Lipid A deacylase LpxR › LpxR | 0.53 | 48.0 | 4.23e-01 | 96.3% | 74.3% |
| 3837982 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.52 | 37.0 | 3.64e-01 | 90.8% | 66.1% |
D3
medium
residues 360-448
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5dl7A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.87 | 76.0 | 4.78e-01 | 100.0% | 20.4% |
| 3vy8X00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.78 | 66.0 | 4.34e-01 | 98.9% | 23.5% |
| 1a0sP00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.78 | 67.0 | 4.21e-01 | 97.8% | 19.6% |
| 3qlbA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.77 | 73.0 | 4.36e-01 | 100.0% | 24.7% |
| 1xkwA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.76 | 71.0 | 4.29e-01 | 100.0% | 26.1% |
| 2f1cX00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.75 | 65.0 | 4.63e-01 | 98.9% | 32.9% |
| 3sy9C01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.75 | 68.0 | 4.43e-01 | 96.6% | 26.9% |
| 7vu0A01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.75 | 66.0 | 4.21e-01 | 97.8% | 23.0% |
| 2hdiA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.75 | 69.0 | 4.27e-01 | 100.0% | 29.6% |
| 4k3bA06 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.75 | 68.0 | 4.42e-01 | 98.9% | 32.2% |
| 3njtA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.74 | 65.0 | 4.36e-01 | 100.0% | 27.3% |
| 6wimA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.72 | 67.0 | 4.31e-01 | 100.0% | 24.9% |
| 1bt9A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.71 | 65.0 | 4.23e-01 | 100.0% | 25.3% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.71 | 59.0 | 4.84e-01 | 96.6% | 51.0% |
| 3dwoX00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.70 | 62.0 | 3.97e-01 | 100.0% | 21.6% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.68 | 42.0 | 3.49e-01 | 71.9% | 36.9% |
| 3qq2B00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.67 | 58.0 | 4.23e-01 | 96.6% | 39.6% |
| 1uynX00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.66 | 59.0 | 4.16e-01 | 98.9% | 35.8% |
| 2oojA00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.66 | 48.0 | 4.14e-01 | 94.4% | 51.1% |
| 1n9eA01 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.66 | 53.0 | 3.31e-01 | 88.8% | 68.4% |
| 2qomB00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.64 | 58.0 | 4.09e-01 | 98.9% | 36.1% |
| 2wjqA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.64 | 53.0 | 4.11e-01 | 100.0% | 40.5% |
| 4fuvA00 | 2.40.160.170 | Mainly Beta › Beta Barrel › Porin › | 0.63 | 56.0 | 4.16e-01 | 95.5% | 48.8% |
| 1tk1A00 | 3.40.1500.10 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic | 0.62 | 56.0 | 4.19e-01 | 98.9% | 86.3% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.62 | 52.0 | 4.36e-01 | 92.1% | 54.1% |
| 3dzmB00 | 2.40.160.70 | Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. | 0.61 | 53.0 | 4.05e-01 | 95.5% | 52.0% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.60 | 46.0 | 4.84e-01 | 95.5% | 94.8% |
| 2c4iA01 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.59 | 41.0 | 3.73e-01 | 94.4% | 53.4% |
| 1ff9A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 51.0 | 4.03e-01 | 94.4% | 88.2% |
| 5eo6B00 | 3.40.1500.10 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic | 0.58 | 53.0 | 3.58e-01 | 100.0% | 82.7% |
| 1bxwA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.57 | 48.0 | 3.87e-01 | 95.5% | 47.1% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.57 | 45.0 | 3.53e-01 | 85.4% | 86.7% |
| 4kghA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.56 | 46.0 | 3.67e-01 | 92.1% | 48.7% |
| 2ervA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 44.0 | 3.70e-01 | 92.1% | 50.7% |
| 3bghB01 | 3.30.160.180 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Putative neuraminyllactose-binding hemagglutinin homolog like domain | 0.55 | 46.0 | 3.73e-01 | 92.1% | 69.0% |
| 2n8xA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.55 | 48.0 | 3.98e-01 | 100.0% | 83.1% |
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 45.0 | 3.15e-01 | 91.0% | 99.0% |
| 5azpA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.54 | 44.0 | 4.62e-01 | 96.6% | 95.1% |
| 3q0xA01 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.53 | 37.0 | 3.11e-01 | 98.9% | 41.9% |
| 1p4tA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 43.0 | 3.61e-01 | 96.6% | 52.3% |
| 2gvhC01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 45.0 | 3.96e-01 | 98.9% | 87.5% |
| 3nqkA02 | 2.40.128.440 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 | 0.51 | 43.0 | 3.60e-01 | 95.5% | 56.2% |
| 2ckfB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 42.0 | 3.46e-01 | 93.3% | 81.2% |
| 4n4rB00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.51 | 42.0 | 3.68e-01 | 97.8% | 69.5% |
| 2pfcA00 | 3.10.129.30 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Rv0098, thioesterase-like hot dog domain | 0.50 | 43.0 | 3.54e-01 | 93.3% | 80.0% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1718522 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.80 | 75.0 | 4.51e-01 | 100.0% | 24.9% |
| 3970589 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.78 | 57.0 | 3.72e-01 | 100.0% | 19.8% |
| 3968316 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.77 | 73.0 | 4.47e-01 | 98.9% | 19.8% |
| 3945018 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.76 | 69.0 | 4.41e-01 | 97.8% | 25.1% |
| 3506543 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.76 | 70.0 | 4.38e-01 | 100.0% | 24.8% |
| 4006163 | 5084.5.4.13 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › DUF481, Porin_OmpG | 0.75 | 63.0 | 4.31e-01 | 98.9% | 27.1% |
| 3405242 | 5084.5.1.37 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C | 0.74 | 56.0 | 4.35e-01 | 96.6% | 38.3% |
| 3574367 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.74 | 67.0 | 4.42e-01 | 97.8% | 31.8% |
| 3941832 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.73 | 66.0 | 4.32e-01 | 100.0% | 29.7% |
| 3933957 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.73 | 60.0 | 4.90e-01 | 98.9% | 49.4% |
| 3970069 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.72 | 61.0 | 3.97e-01 | 93.3% | 24.6% |
| 3839826 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.72 | 64.0 | 4.12e-01 | 95.5% | 35.1% |
| 3971984 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.72 | 66.0 | 4.10e-01 | 100.0% | 30.2% |
| 3963443 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.72 | 66.0 | 5.81e-01 | 98.9% | 84.0% |
| 4508983 | 5084.5.1.18 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C | 0.71 | 65.0 | 4.10e-01 | 100.0% | 21.0% |
| 4878135 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.70 | 65.0 | 3.91e-01 | 100.0% | 25.0% |
| 3839274 | 5084.5.1.25 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › HP_OMP_2 | 0.70 | 64.0 | 3.90e-01 | 97.8% | 19.0% |
| 3980921 | 5084.5.1.18 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C | 0.70 | 65.0 | 4.28e-01 | 100.0% | 26.2% |
| 3964265 | 5084.1.1.43 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Autotransporter | 0.70 | 63.0 | 5.37e-01 | 100.0% | 73.8% |
| 3808882 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.70 | 62.0 | 4.86e-01 | 96.6% | 48.6% |
| 3980865 | 5084.1.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg | 0.70 | 63.0 | 4.39e-01 | 97.8% | 32.2% |
| 3966027 | 5084.5.4.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X | 0.70 | 62.0 | 3.94e-01 | 100.0% | 21.7% |
| 3173251 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.69 | 58.0 | 4.65e-01 | 96.6% | 47.1% |
| 3965061 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.69 | 63.0 | 4.45e-01 | 98.9% | 41.5% |
| 3326287 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.69 | 61.0 | 5.49e-01 | 96.6% | 70.8% |
| 3969394 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.68 | 61.0 | 4.04e-01 | 100.0% | 28.9% |
| 3839454 | 5084.5.1.25 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › HP_OMP_2 | 0.67 | 60.0 | 3.79e-01 | 96.6% | 32.3% |
| 3188245 | 867.1.1.1 ↗ | a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coprogen_oxidas | 0.67 | 60.0 | 4.02e-01 | 100.0% | 82.9% |
| 4669999 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.64 | 58.0 | 4.00e-01 | 100.0% | 33.2% |
| 5081121 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.64 | 58.0 | 4.52e-01 | 96.6% | 53.7% |
| 145377 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.63 | 51.0 | 4.23e-01 | 96.6% | 50.0% |
| 3164124 | 5084.1.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity | 0.62 | 50.0 | 4.50e-01 | 95.5% | 64.2% |
| 4537321 | 5084.1.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity | 0.58 | 46.0 | 3.65e-01 | 95.5% | 41.7% |
| 3285688 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.58 | 48.0 | 4.74e-01 | 97.8% | 83.2% |
| 3968198 | 7503.1.1.1 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CsgG | 0.57 | 46.0 | 3.61e-01 | 88.8% | 64.0% |
| 3937062 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.56 | 41.0 | 3.38e-01 | 93.3% | 40.0% |
| 3838701 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.55 | 49.0 | 3.19e-01 | 98.9% | 59.3% |
| 4934997 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.55 | 47.0 | 4.24e-01 | 95.5% | 68.3% |
| 4305692 | 5084.1.1.34 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2715 | 0.55 | 47.0 | 3.75e-01 | 97.8% | 47.9% |
| 169832 | 5084.1.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane | 0.54 | 46.0 | 3.57e-01 | 96.6% | 51.2% |
| 4042627 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.53 | 46.0 | 3.72e-01 | 95.5% | 50.6% |
| 3838975 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.52 | 44.0 | 3.50e-01 | 93.3% | 51.4% |
| 4279299 | 5084.1.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane | 0.52 | 44.0 | 3.56e-01 | 94.4% | 47.8% |
| 3525853 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.51 | 41.0 | 3.47e-01 | 91.0% | 52.0% |