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CAKLQF020000014.1__CAH1087151.1__SAMEA5780031_02614__00035

Bact-Vir

CAKLQF020000014.1__CAH1087151.1__SAMEA5780031_02614__00035

Identity

Kingdom:
phage

Quality

93.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 38-304
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01522.27 best Polysacc_deac_1 85.2 5.20e-24 64.0% 96.0%
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vusB00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.97 89.0 9.14e-01 97.8% 97.3%
4wcjA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.92 76.0 8.22e-01 98.1% 96.6%
5bu6A00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.92 84.0 8.48e-01 92.9% 95.8%
4hd5A02 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.88 70.0 7.78e-01 97.0% 98.6%
2cc0A00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.83 47.0 5.52e-01 84.6% 77.1%
5lfzA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.83 47.0 5.43e-01 83.1% 75.0%
2c71A00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.82 45.0 5.22e-01 76.8% 71.2%
4l1gA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.82 48.0 5.37e-01 81.3% 72.9%
4m1bA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.80 48.0 5.52e-01 98.1% 78.5%
3hftA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.74 52.0 5.45e-01 85.4% 76.9%
4v15A02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.69 43.0 4.65e-01 100.0% 72.2%
3rxzA00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.68 54.0 5.26e-01 80.9% 76.6%
2b5dX01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.68 52.0 4.44e-01 77.9% 83.7%
3wqcA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.67 41.0 4.51e-01 100.0% 72.2%
4ly4A00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.67 51.0 4.98e-01 78.3% 82.4%
1vkfB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 40.0 4.87e-01 99.3% 98.3%
4beqA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.62 40.0 4.37e-01 85.8% 78.3%
6xehA01 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 26.0 4.03e-01 89.5% 98.2%
1k1wA01 3.20.110.20 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › 0.59 49.0 4.39e-01 86.1% 79.4%
3oa3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 46.0 4.76e-01 98.5% 85.4%
2l69A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 30.0 4.16e-01 88.0% 97.8%
4nicA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 26.0 3.82e-01 87.3% 93.2%
1nowA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.57 53.0 4.85e-01 99.3% 90.0%
4lusA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.57 42.0 4.69e-01 95.1% 94.9%
4l9yD00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.56 47.0 4.77e-01 89.5% 87.9%
6d2xA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.56 52.0 4.85e-01 98.5% 92.9%
5kbpA01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.56 47.0 4.70e-01 99.6% 84.9%
3qq5A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 31.0 3.86e-01 90.3% 86.0%
1nvmA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 48.0 4.79e-01 99.3% 88.9%
2pljA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.55 43.0 4.59e-01 94.8% 92.6%
3lyeA00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.55 44.0 4.36e-01 95.1% 78.2%
3llxA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.55 42.0 4.59e-01 95.1% 95.0%
2ajtA01 3.40.50.10940 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 34.0 4.13e-01 87.6% 93.1%
4s1wB01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.54 29.0 3.31e-01 89.5% 68.5%
1vcfB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 45.0 4.33e-01 99.6% 78.9%
4m7tA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 43.0 4.45e-01 100.0% 89.8%
3qi7A01 3.40.50.11400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 26.0 3.44e-01 93.3% 85.5%
1d8cA01 3.20.20.360 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Malate synthase, domain 3 0.52 48.0 4.04e-01 99.3% 67.3%
5dmmA00 3.20.20.330 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain 0.52 48.0 4.69e-01 99.3% 95.5%
1rcuA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 33.0 4.00e-01 97.8% 100.0%
1f8iA00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.51 47.0 4.00e-01 98.5% 73.8%
4k36B00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 47.0 4.27e-01 100.0% 81.6%
1afsA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.50 47.0 4.43e-01 100.0% 88.7%
1kjnA00 3.40.50.10160 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MTH777-like 0.50 29.0 3.76e-01 89.9% 98.7%
1jx6A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 30.0 3.76e-01 93.3% 100.0%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1148175 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.97 93.0 9.35e-01 99.3% 97.4%
1489290 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.94 89.0 9.05e-01 97.0% 98.9%
1407103 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.92 76.0 8.22e-01 98.1% 96.6%
5028116 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.92 73.0 7.85e-01 100.0% 93.0%
2559813 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.89 73.0 7.90e-01 98.1% 97.4%
3946877 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.89 76.0 7.92e-01 96.6% 94.7%
2469812 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.88 71.0 7.79e-01 97.0% 98.6%
4033861 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.85 75.0 7.83e-01 98.1% 98.0%
4344827 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.84 47.0 5.58e-01 98.1% 76.8%
3977238 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.84 79.0 7.96e-01 100.0% 97.4%
4928198 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.83 50.0 5.64e-01 76.8% 75.0%
4200910 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.82 47.0 5.56e-01 85.8% 77.9%
4482177 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.81 47.0 5.35e-01 80.9% 73.3%
4928575 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.79 53.0 5.69e-01 77.2% 76.1%
None 0.79 49.0 5.02e-01 80.5% 64.1%
5028434 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.78 73.0 7.35e-01 97.0% 98.9%
4974206 2002.3.1.12 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › DUF2334 0.78 56.0 5.80e-01 79.0% 76.9%
3783671 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.77 48.0 5.27e-01 81.6% 73.8%
5003256 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.77 51.0 5.39e-01 77.5% 73.1%
4927343 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.76 53.0 5.47e-01 80.1% 74.4%
5028282 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.76 52.0 5.18e-01 80.5% 66.8%
5043600 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.75 52.0 5.72e-01 84.6% 83.1%
4973285 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.74 53.0 5.62e-01 76.8% 80.0%
4999883 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.74 55.0 5.69e-01 78.3% 79.6%
5048251 2002.3.1.12 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › DUF2334 0.74 51.0 5.55e-01 80.5% 82.6%
5081061 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.73 56.0 5.32e-01 78.3% 78.7%
4968830 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.73 69.0 6.85e-01 97.4% 100.0%
3970855 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.72 68.0 6.37e-01 98.9% 92.8%
4929231 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.72 55.0 5.43e-01 86.1% 73.7%
3967543 2002.3.1.12 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › DUF2334 0.72 53.0 5.52e-01 78.7% 80.4%
4988751 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.71 51.0 5.31e-01 77.2% 78.0%
4974492 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.71 56.0 5.53e-01 81.3% 76.7%
5022925 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.70 53.0 5.15e-01 78.7% 70.2%
4970327 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.70 53.0 4.87e-01 76.8% 81.2%
5076025 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.70 54.0 5.40e-01 79.8% 77.8%
5030140 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.70 53.0 5.10e-01 77.5% 79.6%
4998010 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.69 54.0 5.10e-01 85.8% 68.9%
5026690 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.69 53.0 5.52e-01 78.3% 96.8%
5029139 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.69 52.0 5.30e-01 77.5% 85.3%
8997 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.68 52.0 4.44e-01 77.9% 83.7%
422782 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.68 54.0 5.24e-01 80.9% 76.3%
3977005 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.68 53.0 5.17e-01 80.9% 76.9%
3720513 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.67 52.0 4.97e-01 78.7% 79.0%
3196271 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.67 51.0 4.99e-01 77.2% 74.7%
None 0.67 52.0 4.97e-01 78.7% 79.7%
4012500 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.67 52.0 5.25e-01 80.9% 78.5%
3283761 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.67 53.0 5.23e-01 80.9% 78.1%
3726098 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.67 51.0 4.72e-01 78.3% 78.5%
4299826 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.66 50.0 4.95e-01 81.3% 73.8%
5052248 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.66 51.0 4.77e-01 78.3% 98.4%
5020691 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.66 50.0 4.79e-01 76.8% 79.7%
4358328 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.66 50.0 4.41e-01 77.9% 80.0%
3282380 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.66 52.0 5.08e-01 80.9% 76.2%
None 0.66 51.0 4.98e-01 78.7% 98.6%
4047268 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.65 55.0 5.31e-01 86.5% 98.3%
5065919 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.64 50.0 4.56e-01 79.0% 94.9%
4962030 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.64 53.0 5.10e-01 85.0% 80.7%
4939021 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.63 52.0 4.91e-01 84.6% 72.8%
4950444 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.63 52.0 4.96e-01 85.4% 77.0%
4941724 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.62 49.0 4.90e-01 80.5% 80.4%
4412950 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.61 47.0 4.92e-01 78.7% 86.7%
5002896 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.61 50.0 4.73e-01 85.0% 77.4%
5082093 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.60 51.0 4.90e-01 86.9% 99.0%
None 0.60 50.0 4.73e-01 85.4% 79.7%
4457810 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.58 47.0 4.71e-01 99.6% 82.6%
4997470 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.57 48.0 4.75e-01 98.9% 84.4%
5000003 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.56 47.0 4.59e-01 99.3% 80.3%
None 0.55 47.0 4.63e-01 98.9% 83.9%
5046845 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.55 46.0 4.63e-01 98.9% 85.8%
4987837 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.54 50.0 4.99e-01 99.3% 94.9%
4960582 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.54 51.0 4.90e-01 99.6% 93.8%
5072669 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.54 47.0 4.76e-01 99.3% 92.2%
1106783 2002.1.1.125 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,SPASM 0.53 43.0 4.45e-01 100.0% 89.8%
4110991 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.53 24.0 3.52e-01 99.3% 92.8%
5054042 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.52 48.0 4.59e-01 98.9% 85.9%
5012605 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.52 50.0 4.67e-01 100.0% 95.9%
5010770 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.52 48.0 4.04e-01 99.6% 62.3%
4937609 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.52 48.0 4.49e-01 98.9% 85.3%
4417085 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.51 48.0 4.17e-01 99.3% 91.1%
4999944 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.51 34.0 4.12e-01 89.5% 99.4%
4945495 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.51 48.0 4.44e-01 99.3% 89.4%
3590339 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.51 29.0 3.53e-01 100.0% 84.7%
D2 medium residues 309-401_438-467_512-551_611-664
PDB
Domain cluster: representative
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF14883.13 best GHL13 174.0 6.10e-51 41.9% 27.2%
PF14883.13 GHL13 35.6 7.90e-09 20.7% 13.0%
PF14883.13 GHL13 39.1 6.70e-10 16.6% 10.5%
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4p7oB00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.97 94.0 7.69e-01 98.6% 99.4%
1rh9A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.79 75.0 6.14e-01 99.5% 94.9%
7plsA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.77 72.0 6.14e-01 98.2% 95.1%
7lnpA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.76 71.0 5.94e-01 98.2% 95.2%
7db5A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.76 71.0 6.01e-01 98.2% 94.7%
7o0eA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.76 71.0 5.97e-01 100.0% 96.1%
1myrA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.75 69.0 5.19e-01 98.2% 94.6%
1b1yA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.75 70.0 5.24e-01 99.5% 88.0%
3amlA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.74 70.0 5.38e-01 100.0% 87.3%
1hl8A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.74 70.0 5.92e-01 99.1% 94.0%
4jcmA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.74 69.0 5.61e-01 99.1% 97.7%
3zr5A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.74 66.0 5.86e-01 94.9% 94.1%
3k1dA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.74 69.0 5.59e-01 100.0% 93.4%
2c0hA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.73 68.0 5.68e-01 99.1% 92.9%
2wc7A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.73 67.0 5.45e-01 98.2% 97.4%
3zssA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.72 68.0 5.62e-01 100.0% 98.6%
6y9tB01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.72 67.0 5.46e-01 100.0% 98.5%
1m53A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.72 67.0 5.39e-01 100.0% 97.8%
1eswA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.71 66.0 4.96e-01 98.6% 99.0%
6ecaA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.71 67.0 5.86e-01 100.0% 94.9%
6ddtA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.70 64.0 5.25e-01 95.9% 92.1%
3alfA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.69 64.0 5.88e-01 99.1% 99.3%
3ijdA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.68 63.0 5.70e-01 97.2% 95.8%
3oyzA01 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.68 62.0 5.80e-01 96.8% 97.8%
7wmzC01 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.68 62.0 5.66e-01 96.3% 100.0%
1b5tA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.67 62.0 5.67e-01 97.2% 98.2%
2d73A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 61.0 5.33e-01 100.0% 94.1%
5w4zA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.66 61.0 4.77e-01 100.0% 95.7%
7bipB01 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.65 59.0 5.15e-01 97.2% 100.0%
6ketA01 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.65 59.0 5.00e-01 97.2% 100.0%
1lucA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.64 60.0 5.17e-01 99.5% 99.4%
3b9oA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.64 60.0 4.72e-01 100.0% 96.1%
1lucB00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.64 58.0 5.06e-01 96.3% 99.7%
3dxiA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 59.0 5.28e-01 98.2% 80.6%
1ad1A00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.63 58.0 5.46e-01 98.6% 96.2%
4uwmA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.63 58.0 4.91e-01 100.0% 99.2%
6lr1A00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.63 58.0 4.56e-01 100.0% 94.9%
1p0kA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 58.0 5.14e-01 99.5% 79.4%
2e67A00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.62 58.0 5.41e-01 100.0% 94.3%
3ks6A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.60 56.0 5.32e-01 97.7% 96.8%
2h9aA01 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.60 56.0 5.25e-01 98.6% 93.0%
5vakA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 54.0 4.30e-01 97.7% 94.5%
1gkpA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.60 55.0 4.67e-01 99.5% 89.6%
1l6wA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 49.0 4.90e-01 94.0% 89.1%
1to3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 51.0 4.66e-01 100.0% 94.8%
3qkwB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.55 42.0 4.68e-01 99.1% 98.9%
3rptA00 3.20.20.40 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase 0.54 48.0 4.55e-01 94.9% 99.6%
1k3rA01 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.54 44.0 4.71e-01 96.8% 97.9%
2pr7A00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.53 33.0 4.05e-01 95.4% 96.4%
3k2gA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.53 49.0 4.15e-01 100.0% 92.4%
3nl6C02 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 43.0 3.85e-01 85.3% 89.1%
8kcaB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 31.0 3.48e-01 75.1% 73.7%
3i3oG00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 38.0 3.68e-01 75.1% 92.2%
1l1lA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.51 47.0 3.55e-01 100.0% 68.1%
4rg1A01 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.50 43.0 4.48e-01 95.9% 97.5%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3943700 2002.1.1.182 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GHL13 0.97 94.0 7.46e-01 97.7% 93.9%
1299845 2002.1.1.182 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GHL13 0.97 93.0 7.53e-01 97.7% 97.3%
2319354 2002.1.1.182 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GHL13 0.97 93.0 7.61e-01 98.2% 99.4%
3229618 2002.1.1.86 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_59 0.75 70.0 6.11e-01 98.6% 92.7%
3495953 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.74 70.0 5.52e-01 100.0% 95.0%
3959199 2002.1.1.4 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase 0.73 69.0 5.78e-01 100.0% 98.3%
4944334 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.73 68.0 5.96e-01 97.7% 91.3%
4391441 2002.1.1.4 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase 0.73 69.0 5.77e-01 100.0% 92.4%
1094998 2002.1.1.4 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase 0.73 68.0 5.16e-01 100.0% 92.8%
4426583 2002.1.1.93 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_77 0.68 61.0 4.59e-01 96.8% 94.9%
3282806 2002.1.1.16 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.67 61.0 5.54e-01 97.2% 100.0%
3288478 2002.1.1.16 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.66 60.0 5.23e-01 97.2% 99.1%
4945240 2002.1.1.36 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind 0.65 60.0 5.50e-01 97.7% 93.6%
3944933 2002.1.1.16 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.65 60.0 5.16e-01 97.7% 99.1%
4591130 2002.1.1.16 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.65 60.0 5.05e-01 99.5% 99.4%
4454718 2002.1.1.36 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind 0.64 60.0 5.51e-01 100.0% 91.1%
5040463 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.64 60.0 5.35e-01 99.1% 98.3%
2388233 2002.1.1.16 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.64 59.0 4.61e-01 100.0% 94.7%
4547012 2002.1.1.22 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL 0.63 52.0 3.88e-01 87.6% 52.3%
4967914 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 33.0 3.67e-01 75.1% 62.9%
4012806 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.62 56.0 4.71e-01 97.2% 94.2%
4013187 2002.1.1.108 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NMO 0.60 52.0 5.11e-01 91.2% 90.6%
3953330 2002.1.1.176 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase 0.60 52.0 4.91e-01 92.2% 83.3%
5050667 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.58 53.0 4.91e-01 97.7% 100.0%
3789521 2003.1.1.48 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › YjeF_N 0.55 40.0 3.71e-01 75.1% 77.5%
3928585 207.1.1.156 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 0.55 40.0 4.02e-01 74.7% 89.8%
4968084 2004.1.1.343 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 0.54 34.0 3.39e-01 75.1% 60.0%
4947525 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.54 40.0 3.66e-01 75.1% 98.6%
4971254 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.54 31.0 3.79e-01 84.8% 90.0%
4425802 2003.1.1.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.54 39.0 3.53e-01 73.3% 89.5%
5026607 2488.1.1.6 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_3 0.53 46.0 4.78e-01 97.2% 96.6%
5044445 2488.1.1.6 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_3 0.53 47.0 4.89e-01 97.2% 99.5%
4983276 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.53 39.0 3.60e-01 75.1% 99.3%
3059315 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.52 33.0 4.00e-01 98.6% 96.4%
4975254 2488.1.1.6 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_3 0.52 46.0 4.71e-01 97.2% 95.3%
5078157 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.52 38.0 3.26e-01 75.1% 99.2%
4027084 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.52 37.0 3.98e-01 99.5% 85.4%
4971998 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.52 38.0 3.20e-01 75.1% 95.5%
4990108 2488.1.1.6 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_3 0.52 42.0 4.57e-01 96.3% 100.0%
4939054 2488.1.1.6 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_3 0.51 44.0 4.62e-01 95.4% 99.0%
4930896 2488.1.1.6 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_3 0.51 43.0 4.56e-01 95.4% 99.5%
5043073 2488.1.1.6 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_3 0.51 45.0 4.68e-01 96.8% 100.0%
4392313 2006.1.3.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.50 32.0 3.71e-01 95.9% 87.1%
D3 medium residues 402-437_468-511
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14883.13 best GHL13 38.8 8.30e-10 56.2% 13.6%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4p7oB00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.80 76.0 4.78e-01 100.0% 28.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2319354 2002.1.1.182 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GHL13 0.89 85.0 5.33e-01 100.0% 31.2%
3943700 2002.1.1.182 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GHL13 0.76 72.0 4.49e-01 100.0% 28.8%
4185320 2003.1.5.174 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_15 0.51 43.0 2.88e-01 100.0% 79.7%
D4 medium residues 552-610
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14883.13 best GHL13 71.5 9.00e-20 100.0% 18.2%
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4p7oB00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.94 87.0 5.23e-01 100.0% 17.6%
2heuB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.65 46.0 3.38e-01 84.7% 26.2%
3ctpA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 50.0 3.89e-01 98.3% 37.0%
2bmbA02 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.65 55.0 3.50e-01 100.0% 38.5%
2ymbA00 3.30.870.30 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain 0.64 53.0 4.03e-01 96.6% 58.2%
2o20A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 52.0 3.97e-01 100.0% 38.7%
1eljA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.64 46.0 3.30e-01 88.1% 25.1%
3ty4B00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.63 53.0 3.33e-01 98.3% 41.7%
1r6uA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 53.0 3.55e-01 100.0% 39.1%
1z05A03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 51.0 3.77e-01 93.2% 79.4%
3k9cA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 54.0 4.14e-01 98.3% 53.9%
3k7lA01 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.63 48.0 3.38e-01 84.7% 29.4%
3mt0A00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 51.0 3.28e-01 91.5% 22.4%
8fazD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 52.0 3.55e-01 100.0% 55.0%
3fdxA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 52.0 4.12e-01 98.3% 56.7%
7p8na01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 46.0 4.20e-01 84.7% 61.4%
4ombA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 42.0 3.21e-01 98.3% 28.6%
2i9iA00 3.30.160.180 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Putative neuraminyllactose-binding hemagglutinin homolog like domain 0.60 43.0 2.97e-01 78.0% 22.6%
7wd3A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 49.0 3.70e-01 100.0% 81.4%
1yp1A00 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.59 47.0 3.31e-01 89.8% 30.2%
4xrpA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 43.0 3.31e-01 79.7% 96.4%
3cr8C02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 49.0 3.48e-01 98.3% 31.3%
3prbA03 3.30.70.2210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 49.0 4.64e-01 100.0% 95.9%
4eadA02 3.40.1030.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.58 48.0 3.36e-01 100.0% 42.4%
1p1mA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.57 47.0 3.12e-01 100.0% 39.1%
5kztA03 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.57 47.0 3.32e-01 100.0% 53.9%
1z8fA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 44.0 3.57e-01 88.1% 78.5%
1d2gA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 46.0 3.38e-01 100.0% 53.7%
4nu0A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 49.0 3.37e-01 100.0% 44.8%
1ig0A01 3.40.50.10240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain 0.55 43.0 3.16e-01 91.5% 50.3%
1xknA00 3.75.10.10 Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A 0.54 43.0 2.80e-01 98.3% 58.1%
7kseA02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 45.0 3.51e-01 100.0% 62.3%
2j49A00 1.25.40.500 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain 0.54 40.0 3.18e-01 83.1% 44.0%
3tauA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 41.0 3.28e-01 88.1% 68.4%
5ywwA01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.52 42.0 3.57e-01 98.3% 62.6%
4dqlA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.52 43.0 3.26e-01 100.0% 60.2%
3i8oA01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.51 42.0 3.45e-01 100.0% 68.0%
3fzvD02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 39.0 3.38e-01 91.5% 58.7%
1onfA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 41.0 2.92e-01 96.6% 58.8%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2319354 2002.1.1.182 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GHL13 0.97 91.0 5.36e-01 100.0% 16.4%
5082467 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.67 59.0 3.91e-01 100.0% 43.7%
4056757 2004.1.1.414 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 0.67 58.0 3.85e-01 100.0% 72.2%
5060625 2004.1.1.14 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU 0.65 55.0 3.85e-01 100.0% 80.9%
5075149 2002.1.1.57 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D 0.65 53.0 3.29e-01 96.6% 16.6%
3357471 2007.5.1.1 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL 0.64 49.0 3.62e-01 88.1% 55.4%
3337981 2484.1.1.176 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 0.63 53.0 3.31e-01 98.3% 48.3%
4355789 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.63 50.0 3.80e-01 91.5% 79.4%
1036840 2485.1.1.9 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › 2Fe-2S_thioredx 0.63 48.0 4.03e-01 86.4% 53.6%
4992747 2007.22.1.1 a/b three-layered sandwiches › Flavodoxin-like › Methyl-viologen reducing hydrogenase subunit D › Methyl-viologen reducing hydrogenase subunit D › FlpD 0.62 49.0 4.20e-01 91.5% 89.5%
1563571 301.9.1.1 a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA 0.62 51.0 4.91e-01 98.3% 82.4%
3435216 2005.1.1.41 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C 0.62 52.0 3.83e-01 100.0% 47.4%
4974681 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.62 49.0 3.57e-01 93.2% 32.4%
4185839 2007.1.13.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase 0.61 50.0 3.78e-01 94.9% 52.9%
4627252 7589.1.1.2 a/b three-layered sandwiches › YgbK-like › YgbK-like › YgbK-like › NBD_C 0.61 49.0 3.60e-01 91.5% 60.6%
2488644 2005.1.1.15 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase 0.59 49.0 3.99e-01 98.3% 50.4%
4935279 246.1.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase 0.59 48.0 3.23e-01 100.0% 39.6%
3611168 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.59 47.0 3.09e-01 93.2% 31.1%
3938861 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.58 48.0 3.50e-01 94.9% 66.9%
5078047 327.7.1.2 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C 0.58 44.0 4.32e-01 91.5% 78.5%
5083794 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.57 45.0 3.28e-01 89.8% 48.0%
3926777 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.57 45.0 3.49e-01 98.3% 82.4%
5052862 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 46.0 3.89e-01 98.3% 70.4%
4000850 7516.1.1.8 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Galactosyl_T 0.57 46.0 3.31e-01 96.6% 31.5%
3724141 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.56 45.0 2.76e-01 91.5% 17.6%
3193950 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.56 42.0 3.14e-01 84.7% 70.3%
3839780 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 46.0 3.09e-01 100.0% 56.0%
3800077 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.56 43.0 3.48e-01 84.7% 50.4%
5065518 327.7.1.2 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C 0.56 45.0 4.39e-01 96.6% 86.2%
4260704 224.1.1.2 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.56 47.0 4.09e-01 98.3% 87.4%
3799601 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 44.0 3.08e-01 93.2% 26.5%
4881934 2485.1.1.10 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DSBA 0.52 42.0 4.14e-01 100.0% 87.7%
3376097 2004.1.1.675 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2, NBD_SMAX1 0.52 46.0 2.66e-01 100.0% 30.2%
3597358 301.1.1.0 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like 0.51 40.0 3.31e-01 96.6% 51.5%