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CAKLQF020000014.1__CAH1087302.1__SAMEA5780031_02664__00085
Bact-VirCAKLQF020000014.1__CAH1087302.1__SAMEA5780031_02664__00085
Identity
- Kingdom:
- phage
Quality
95.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-83_145-225
Domain cluster:
rep: SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00136__D312-335_414-536
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00912.29 best | Transgly | 82.0 | 5.20e-23 | 60.0% | 42.7% |
D2
medium
residues 84-144
Domain cluster:
rep: CAKLQF020000004.1__CAH1076905.1__SAMEA5780031_01085__00179__D104-162
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00912.29 best | Transgly | 54.4 | 1.50e-14 | 100.0% | 34.3% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oqoA00 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.91 | 78.0 | 5.34e-01 | 100.0% | 30.4% |
| 2olvB02 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.82 | 65.0 | 4.56e-01 | 100.0% | 27.9% |
| 1ocsA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.56 | 48.0 | 3.84e-01 | 100.0% | 75.8% |
| 1rrsA01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.54 | 39.0 | 3.26e-01 | 100.0% | 41.4% |
| 4ewcA03 | 1.20.120.1660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 46.0 | 4.36e-01 | 100.0% | 88.0% |
| 1ztdA00 | 1.10.1520.20 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III | 0.53 | 43.0 | 3.46e-01 | 91.8% | 99.2% |
| 7miqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 36.0 | 2.95e-01 | 72.1% | 99.1% |
| 4ywoA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 45.0 | 3.13e-01 | 98.4% | 92.5% |
| 1r6bX03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 41.0 | 3.73e-01 | 95.1% | 94.3% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3971996 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.97 | 92.0 | 5.96e-01 | 100.0% | 27.3% |
| 4108282 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.97 | 93.0 | 5.96e-01 | 100.0% | 27.7% |
| 4173279 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.96 | 91.0 | 5.83e-01 | 100.0% | 25.4% |
| 4217977 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.95 | 90.0 | 5.65e-01 | 100.0% | 23.0% |
| 4669149 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.95 | 90.0 | 5.83e-01 | 100.0% | 27.1% |
| 3839655 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.95 | 90.0 | 5.70e-01 | 100.0% | 24.4% |
| 4179241 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.95 | 90.0 | 5.05e-01 | 100.0% | 11.2% |
| 4044894 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.95 | 89.0 | 5.63e-01 | 100.0% | 23.9% |
| 4319405 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.92 | 86.0 | 5.61e-01 | 100.0% | 27.1% |
| 3588448 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.92 | 85.0 | 5.33e-01 | 100.0% | 21.8% |
| 3980915 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.92 | 84.0 | 5.41e-01 | 100.0% | 24.5% |
| 4033682 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.91 | 84.0 | 5.42e-01 | 100.0% | 25.4% |
| 4584589 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.90 | 83.0 | 5.27e-01 | 100.0% | 25.0% |
| 3987240 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.89 | 82.0 | 5.25e-01 | 100.0% | 24.7% |
| 4107494 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.83 | 74.0 | 5.01e-01 | 100.0% | 28.6% |
| 4052832 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.82 | 72.0 | 4.83e-01 | 100.0% | 26.7% |
| 3987246 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.77 | 71.0 | 4.51e-01 | 100.0% | 22.2% |
| 3432597 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.69 | 49.0 | 4.09e-01 | 75.4% | 87.6% |
| 3579656 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.65 | 47.0 | 4.81e-01 | 95.1% | 78.3% |
| 3936884 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 38.0 | 3.77e-01 | 100.0% | 58.5% |
| 3514219 | 148.1.3.5 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Pol_alpha_B_N | 0.60 | 44.0 | 4.14e-01 | 78.7% | 100.0% |
| 3845947 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 36.0 | 3.68e-01 | 96.7% | 61.7% |
| 4599937 | 3754.1.1.0 ↗ | alpha bundles › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related | 0.59 | 48.0 | 3.11e-01 | 95.1% | 99.1% |
| 5044957 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.55 | 40.0 | 3.83e-01 | 77.0% | 100.0% |
| 1117752 | 4944.1.1.2 ↗ | alpha bundles › Helical bundle in flu nucleocapsid protein › Helical bundle in flu nucleocapsid protein › Helical bundle in flu nucleocapsid protein › NCAP_ISAV_hel | 0.53 | 46.0 | 3.91e-01 | 100.0% | 62.3% |
| 4027117 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.53 | 40.0 | 4.08e-01 | 98.4% | 86.2% |
| 5071640 | 3457.1.1.1 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 | 0.53 | 40.0 | 2.92e-01 | 85.2% | 55.8% |
| 4356696 | 101.1.17.1 ↗ | alpha arrays › HTH › HTH › FF domain › Ribosomal_S17e | 0.53 | 34.0 | 3.33e-01 | 70.5% | 57.1% |