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CAKLQF020000014.1__CAH1087314.1__SAMEA5780031_02670__00091
Bact-VirCAKLQF020000014.1__CAH1087314.1__SAMEA5780031_02670__00091
Identity
- Kingdom:
- phage
Quality
96.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-52
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00301.26 best | Rubredoxin | 85.8 | 2.30e-24 | 94.0% | 100.0% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mbsA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.98 | 93.0 | 5.40e-01 | 100.0% | 14.5% |
| 6nw1A00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.96 | 78.0 | 8.21e-01 | 100.0% | 95.6% |
| 1h7vA00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.92 | 85.0 | 7.96e-01 | 100.0% | 83.3% |
| 4tpuA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.88 | 56.0 | 6.47e-01 | 100.0% | 89.2% |
| 1qcvA00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.81 | 72.0 | 7.09e-01 | 100.0% | 94.3% |
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.70 | 45.0 | 4.95e-01 | 92.0% | 91.7% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 136413 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.99 | 94.0 | 8.71e-01 | 100.0% | 83.3% |
| 4950512 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.98 | 93.0 | 8.37e-01 | 100.0% | 93.8% |
| 3665843 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.98 | 94.0 | 8.67e-01 | 100.0% | 83.3% |
| 4583647 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.98 | 93.0 | 7.90e-01 | 100.0% | 66.7% |
| 5052569 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.98 | 78.0 | 7.89e-01 | 100.0% | 84.0% |
| 2475329 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.97 | 92.0 | 5.33e-01 | 100.0% | 14.7% |
| 3352699 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.97 | 72.0 | 7.30e-01 | 100.0% | 78.0% |
| 4164508 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.97 | 92.0 | 8.83e-01 | 100.0% | 92.7% |
| 4410812 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.97 | 91.0 | 8.49e-01 | 100.0% | 83.3% |
| 3663415 | 375.1.1.64 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX | 0.97 | 72.0 | 6.71e-01 | 100.0% | 65.0% |
| 3439494 | 375.1.1.64 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX | 0.97 | 70.0 | 7.93e-01 | 98.0% | 97.4% |
| 2429323 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.96 | 89.0 | 5.18e-01 | 100.0% | 14.2% |
| 4854345 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.95 | 89.0 | 7.67e-01 | 100.0% | 71.2% |
| 3802236 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.94 | 70.0 | 7.05e-01 | 100.0% | 78.0% |
| 2596887 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.94 | 86.0 | 5.07e-01 | 100.0% | 15.1% |
| 89057 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.92 | 85.0 | 7.96e-01 | 100.0% | 83.3% |
| 5051417 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.90 | 61.0 | 6.13e-01 | 100.0% | 70.0% |
| 5056653 | 375.1.1.64 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX | 0.85 | 53.0 | 5.69e-01 | 100.0% | 74.4% |
| 3702338 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 51.0 | 5.49e-01 | 100.0% | 87.5% |
| 5071104 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 47.0 | 5.01e-01 | 98.0% | 100.0% |
| 5064210 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.62 | 52.0 | 3.90e-01 | 100.0% | 37.2% |
| 3263971 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.53 | 44.0 | 3.61e-01 | 100.0% | 59.0% |