Back to structures

CAKLQF020000015.1__CAH1087569.1__SAMEA5780031_02742__00063

Bact-Vir

CAKLQF020000015.1__CAH1087569.1__SAMEA5780031_02742__00063

Identity

Kingdom:
phage

Quality

89.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-99
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01381.29 best HTH_3 35.6 1.00e-08 59.8% 85.5%
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ox6D00 1.10.3100.10 Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein 0.86 48.0 3.89e-01 70.7% 32.3%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 57.0 6.69e-01 81.5% 100.0%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 57.0 6.27e-01 78.3% 88.0%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 60.0 6.81e-01 92.4% 100.0%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 54.0 6.42e-01 73.9% 100.0%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 59.0 6.24e-01 75.0% 87.7%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 56.0 5.88e-01 71.7% 87.1%
3mlfE00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 51.0 5.25e-01 75.0% 68.6%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 57.0 6.14e-01 73.9% 92.4%
3cecA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 57.0 5.74e-01 73.9% 80.2%
3pxpA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 59.0 5.93e-01 78.3% 96.8%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 54.0 6.07e-01 70.7% 92.9%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 49.0 5.71e-01 77.2% 89.4%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 54.0 6.26e-01 71.7% 100.0%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 58.0 6.45e-01 93.5% 100.0%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 49.0 5.11e-01 71.7% 69.8%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 53.0 6.03e-01 71.7% 100.0%
3u3wA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 54.0 6.22e-01 76.1% 98.6%
6f8hC00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 55.0 5.53e-01 75.0% 80.6%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 54.0 5.47e-01 73.9% 80.0%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 55.0 5.30e-01 77.2% 95.1%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 54.0 5.94e-01 76.1% 97.3%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 53.0 5.77e-01 73.9% 88.3%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 54.0 5.90e-01 77.2% 93.5%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 51.0 5.38e-01 73.9% 84.1%
6b9sB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 51.0 5.67e-01 76.1% 95.9%
2awiA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 49.0 5.63e-01 77.2% 100.0%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 48.0 5.25e-01 70.7% 85.5%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 56.0 5.89e-01 85.9% 100.0%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 50.0 5.41e-01 78.3% 96.1%
3g7dA04 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 50.0 5.06e-01 82.6% 83.5%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 32.0 3.90e-01 98.9% 78.2%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 36.0 3.87e-01 83.7% 73.8%
6s6hA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.51 35.0 3.36e-01 71.7% 75.2%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5036222 101.1.4.16 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 0.89 59.0 7.03e-01 73.9% 96.9%
4979598 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 57.0 6.52e-01 70.7% 88.6%
4950501 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.86 57.0 6.75e-01 72.8% 95.4%
4984923 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 59.0 6.32e-01 72.8% 80.0%
5054533 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 58.0 6.87e-01 77.2% 98.5%
3587762 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 58.0 5.96e-01 77.2% 72.7%
4585952 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.85 59.0 6.69e-01 70.7% 95.7%
5030212 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 58.0 6.67e-01 70.7% 92.9%
4969117 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 58.0 5.60e-01 73.9% 64.0%
4956880 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 57.0 6.51e-01 72.8% 91.4%
4975718 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 57.0 6.29e-01 73.9% 85.3%
3285035 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 59.0 6.05e-01 72.8% 74.4%
5059226 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 58.0 6.19e-01 75.0% 81.2%
3974678 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.84 55.0 6.53e-01 72.8% 95.4%
4978931 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.83 58.0 6.64e-01 71.7% 95.7%
4943355 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.83 58.0 6.40e-01 78.3% 88.0%
3062945 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 59.0 6.65e-01 79.3% 94.4%
4982971 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 56.0 6.02e-01 73.9% 80.0%
5057975 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 60.0 6.66e-01 82.6% 92.0%
None 0.82 57.0 6.71e-01 81.5% 100.0%
5015314 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 59.0 6.34e-01 81.5% 85.0%
5003089 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 57.0 6.54e-01 78.3% 94.3%
373382 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 57.0 6.24e-01 78.3% 86.8%
3290072 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 56.0 5.70e-01 70.7% 77.8%
3972208 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 59.0 6.58e-01 78.3% 93.3%
5000483 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 57.0 5.95e-01 76.1% 78.8%
3164725 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 57.0 5.66e-01 72.8% 75.8%
3591049 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 55.0 4.59e-01 70.7% 43.3%
4940014 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 60.0 6.55e-01 77.2% 94.7%
4929297 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 59.0 6.64e-01 81.5% 100.0%
4010418 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 58.0 6.23e-01 75.0% 86.3%
4952242 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.80 56.0 6.41e-01 78.3% 95.7%
430036 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 56.0 5.67e-01 72.8% 79.3%
3978391 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.80 56.0 6.36e-01 76.1% 94.3%
4300595 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 57.0 5.69e-01 73.9% 75.8%
4393390 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 58.0 5.74e-01 75.0% 78.9%
3589821 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.80 57.0 6.47e-01 81.5% 97.1%
4212800 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 57.0 5.36e-01 73.9% 67.6%
4367316 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 57.0 5.26e-01 75.0% 64.3%
3965549 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 55.0 6.08e-01 76.1% 89.3%
4507416 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 56.0 5.27e-01 78.3% 61.8%
1185976 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 56.0 6.30e-01 85.9% 95.8%
3953562 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 55.0 6.30e-01 77.2% 95.7%
4380509 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 56.0 5.35e-01 73.9% 68.6%
4038777 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 58.0 5.75e-01 77.2% 76.8%
2581392 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 55.0 6.27e-01 75.0% 95.8%
3588760 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 59.0 5.65e-01 79.3% 70.5%
3974079 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 59.0 5.60e-01 79.3% 72.4%
3944738 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 55.0 6.13e-01 78.3% 90.7%
2773 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 55.0 6.04e-01 77.2% 88.3%
3990067 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 55.0 5.90e-01 73.9% 88.7%
3971898 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 52.0 6.15e-01 79.3% 100.0%
5083215 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.76 52.0 6.07e-01 79.3% 100.0%
3506728 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 59.0 5.30e-01 81.5% 77.6%
3587838 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 55.0 6.29e-01 81.5% 98.6%
4537353 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 58.0 5.15e-01 79.3% 58.4%
3969553 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 58.0 6.35e-01 80.4% 98.7%
4448496 101.1.4.27 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.75 52.0 5.91e-01 71.7% 94.3%
4392992 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 55.0 5.86e-01 79.3% 87.5%
3277880 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 57.0 6.26e-01 78.3% 97.3%
3976255 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.75 58.0 6.39e-01 81.5% 100.0%
3587893 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 55.0 5.39e-01 78.3% 71.0%
1510513 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 54.0 5.11e-01 77.2% 64.5%
4274007 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 57.0 6.11e-01 80.4% 92.5%
4033847 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 57.0 5.50e-01 81.5% 72.4%
3957550 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 55.0 6.25e-01 76.1% 100.0%
147355 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 55.0 6.05e-01 78.3% 94.7%
4536849 10.12.1.146 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HTH_3 0.72 60.0 3.87e-01 90.2% 47.6%
4425759 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 53.0 5.02e-01 78.3% 66.4%
5003294 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 53.0 5.85e-01 80.4% 96.0%
148652 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 58.0 5.91e-01 85.9% 88.8%
3999292 101.1.4.27 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.69 50.0 5.17e-01 75.0% 82.4%