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CAKLQF020000016.1__CAH1088148.1__SAMEA5780031_02828__00051
Bact-VirCAKLQF020000016.1__CAH1088148.1__SAMEA5780031_02828__00051
Identity
- Kingdom:
- phage
Quality
97.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-52
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06993.18 best | DUF1304 | 53.3 | 3.40e-14 | 86.5% | 41.8% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 49.0 | 4.67e-01 | 100.0% | 61.3% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.70 | 39.0 | 3.52e-01 | 80.8% | 37.8% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 51.0 | 4.30e-01 | 100.0% | 48.2% |
| 2cz2A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.69 | 47.0 | 3.52e-01 | 71.2% | 69.0% |
| 3bqoA00 | 1.25.40.210 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Telomere repeat-binding factor, dimerisation domain | 0.69 | 53.0 | 3.53e-01 | 100.0% | 21.8% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 45.0 | 3.84e-01 | 96.2% | 45.0% |
| 2avuB00 | 1.10.4000.10 | Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD | 0.64 | 51.0 | 4.06e-01 | 100.0% | 43.3% |
| 5kbwB00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.58 | 47.0 | 3.43e-01 | 100.0% | 83.0% |
| 8adbA01 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.58 | 39.0 | 2.65e-01 | 71.2% | 37.2% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 40.0 | 3.40e-01 | 75.0% | 76.6% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.57 | 48.0 | 3.06e-01 | 100.0% | 18.7% |
| 2ke4A00 | 6.10.140.470 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 48.0 | 3.91e-01 | 100.0% | 55.1% |
| 1oxjA01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.53 | 40.0 | 3.85e-01 | 84.6% | 98.4% |
| 3mczA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.59e-01 | 88.5% | 97.6% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 36.0 | 3.16e-01 | 75.0% | 73.6% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 36.0 | 3.19e-01 | 76.9% | 83.1% |
| 3q18A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 40.0 | 3.21e-01 | 92.3% | 71.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3961297 | 633.10.1.5 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › DUF1304 | 0.99 | 95.0 | 6.73e-01 | 100.0% | 40.0% |
| 4267174 | 614.1.1.24 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › GlutR_dimer | 0.81 | 45.0 | 3.94e-01 | 80.8% | 38.7% |
| 4564711 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.81 | 45.0 | 3.93e-01 | 80.8% | 38.7% |
| 3415494 | 5029.1.1.0 ↗ | extended segments › Oligosaccharyltransferase subunit ost4p › Oligosaccharyltransferase subunit ost4p › Oligosaccharyltransferase subunit ost4p | 0.79 | 62.0 | 5.87e-01 | 96.2% | 71.7% |
| 4009354 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.79 | 45.0 | 3.75e-01 | 100.0% | 33.3% |
| 3960640 | 6113.1.1.0 ↗ | alpha duplicates or obligate multimers › Dimerization element domain in modular polyketide synthases › Dimerization element domain in modular polyketide synthases › Dimerization element domain in modular polyketide synthases | 0.69 | 52.0 | 5.00e-01 | 84.6% | 71.7% |
| 3653791 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.60 | 54.0 | 4.77e-01 | 100.0% | 70.7% |
| 5044306 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.59 | 50.0 | 3.45e-01 | 100.0% | 26.7% |
| 3608380 | 7579.1.1.23 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PAF-AH_p_II | 0.58 | 51.0 | 3.01e-01 | 98.1% | 17.8% |
| 4964878 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.56 | 50.0 | 4.57e-01 | 100.0% | 80.0% |
| 3741234 | 605.2.1.3 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N | 0.55 | 50.0 | 3.80e-01 | 100.0% | 45.2% |
D2
medium
residues 53-117
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06993.18 best | DUF1304 | 73.7 | 1.60e-20 | 96.9% | 57.3% |
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.87 | 70.0 | 5.98e-01 | 100.0% | 56.0% |
| 4agsB04 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.87 | 62.0 | 4.81e-01 | 75.4% | 36.8% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.86 | 79.0 | 6.07e-01 | 100.0% | 87.4% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.84 | 61.0 | 5.89e-01 | 75.4% | 88.7% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.81 | 56.0 | 5.31e-01 | 73.8% | 61.8% |
| 3iq1B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.80 | 72.0 | 5.35e-01 | 100.0% | 84.3% |
| 1dpsA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.79 | 69.0 | 5.24e-01 | 100.0% | 80.5% |
| 2rklF00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.79 | 54.0 | 5.95e-01 | 72.3% | 90.4% |
| 1cnt200 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.78 | 57.0 | 4.48e-01 | 76.9% | 38.5% |
| 2c2uA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.78 | 70.0 | 5.07e-01 | 100.0% | 75.8% |
| 3agtA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.77 | 67.0 | 5.37e-01 | 100.0% | 57.1% |
| 2ebfX02 | 1.20.140.180 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.77 | 67.0 | 5.16e-01 | 100.0% | 44.1% |
| 6wv5A01 | 1.20.1440.130 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain | 0.77 | 68.0 | 5.34e-01 | 100.0% | 54.4% |
| 3e6sA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.76 | 67.0 | 5.05e-01 | 100.0% | 78.6% |
| 1rv2D04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.76 | 55.0 | 5.38e-01 | 76.9% | 90.0% |
| 3kwoA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.76 | 66.0 | 5.09e-01 | 100.0% | 87.9% |
| 2ondA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.75 | 67.0 | 4.27e-01 | 100.0% | 33.1% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 55.0 | 5.40e-01 | 76.9% | 72.5% |
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.75 | 66.0 | 5.98e-01 | 100.0% | 73.3% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 52.0 | 5.04e-01 | 73.8% | 87.7% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.74 | 64.0 | 4.89e-01 | 100.0% | 85.4% |
| 3mx3A01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.73 | 64.0 | 4.54e-01 | 98.5% | 36.9% |
| 4i4cB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.73 | 65.0 | 3.98e-01 | 100.0% | 25.4% |
| 7lb8B01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.73 | 53.0 | 3.38e-01 | 76.9% | 59.6% |
| 2chpA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.73 | 63.0 | 4.92e-01 | 100.0% | 89.9% |
| 2pihA00 | 1.20.1500.10 | Mainly Alpha › Up-down Bundle › YheA-like fold › YheA/YmcA-like | 0.73 | 52.0 | 4.17e-01 | 75.4% | 43.1% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 62.0 | 5.83e-01 | 96.9% | 97.5% |
| 2j4bB00 | 1.25.40.500 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain | 0.72 | 60.0 | 4.84e-01 | 98.5% | 46.6% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 51.0 | 4.73e-01 | 73.8% | 61.4% |
| 1r2jA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.72 | 63.0 | 4.89e-01 | 98.5% | 69.4% |
| 2bvlA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 63.0 | 5.82e-01 | 100.0% | 75.6% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.72 | 56.0 | 4.52e-01 | 89.2% | 43.7% |
| 4c91A03 | 1.20.58.2150 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 60.0 | 4.53e-01 | 100.0% | 46.9% |
| 1lkoA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.71 | 60.0 | 4.74e-01 | 100.0% | 85.5% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.70 | 56.0 | 5.31e-01 | 87.7% | 75.6% |
| 2rpaA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.70 | 61.0 | 5.83e-01 | 100.0% | 92.2% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.69 | 60.0 | 5.80e-01 | 100.0% | 98.6% |
| 1yy7A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.69 | 58.0 | 4.89e-01 | 92.3% | 68.6% |
| 3anwA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 53.0 | 4.49e-01 | 86.2% | 61.1% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.68 | 48.0 | 4.10e-01 | 75.4% | 44.5% |
| 3uj9A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 60.0 | 4.02e-01 | 100.0% | 88.4% |
| 3bvoA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.68 | 55.0 | 5.07e-01 | 90.8% | 77.9% |
| 1yvwA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.68 | 52.0 | 4.68e-01 | 84.6% | 62.0% |
| 2v5cA03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.68 | 60.0 | 4.72e-01 | 96.9% | 56.2% |
| 2b7mA00 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.67 | 59.0 | 3.50e-01 | 100.0% | 32.4% |
| 1jogA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.67 | 58.0 | 4.65e-01 | 100.0% | 84.4% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.66 | 55.0 | 4.86e-01 | 100.0% | 64.2% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.66 | 54.0 | 4.44e-01 | 89.2% | 62.9% |
| 2b1eA01 | 1.20.58.1150 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 58.0 | 5.31e-01 | 100.0% | 86.0% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.63 | 49.0 | 4.97e-01 | 92.3% | 88.9% |
| 3o2tA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.62 | 52.0 | 3.47e-01 | 100.0% | 33.6% |
| 8sorA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.62 | 51.0 | 3.37e-01 | 100.0% | 30.0% |
| 1z82B02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.55 | 44.0 | 3.57e-01 | 93.8% | 91.3% |
| 1q2lA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 42.0 | 2.95e-01 | 87.7% | 45.2% |
| 2khmA01 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.52 | 43.0 | 3.78e-01 | 98.5% | 83.3% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588281 | 622.4.1.34 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › DctQ | 0.86 | 73.0 | 5.95e-01 | 89.2% | 77.3% |
| 4175967 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.83 | 58.0 | 5.26e-01 | 72.3% | 55.3% |
| 5053943 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.83 | 72.0 | 5.42e-01 | 96.9% | 41.3% |
| 5079886 | 159.1.1.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 | 0.82 | 63.0 | 5.94e-01 | 80.0% | 69.3% |
| 4977808 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.82 | 74.0 | 7.26e-01 | 98.5% | 95.7% |
| 3831265 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.82 | 73.0 | 6.47e-01 | 100.0% | 69.5% |
| 3714307 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.80 | 72.0 | 5.36e-01 | 100.0% | 55.6% |
| 3480252 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.79 | 69.0 | 6.58e-01 | 98.5% | 90.7% |
| 3708191 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.78 | 69.0 | 6.64e-01 | 100.0% | 85.3% |
| 5055769 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.78 | 69.0 | 6.41e-01 | 98.5% | 96.2% |
| 3589063 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.77 | 53.0 | 4.32e-01 | 73.8% | 39.2% |
| 3315457 | 109.4.1.1666 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10 | 0.76 | 62.0 | 4.55e-01 | 100.0% | 33.7% |
| 3311490 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.76 | 65.0 | 5.85e-01 | 90.8% | 80.0% |
| 3999236 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.75 | 63.0 | 5.29e-01 | 90.8% | 64.8% |
| 5051427 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.74 | 64.0 | 4.39e-01 | 96.9% | 34.8% |
| 5024482 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.74 | 67.0 | 4.90e-01 | 100.0% | 39.4% |
| 4046023 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.74 | 62.0 | 5.53e-01 | 90.8% | 75.6% |
| 3393542 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.73 | 66.0 | 4.95e-01 | 100.0% | 46.5% |
| 3773235 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.73 | 65.0 | 5.83e-01 | 100.0% | 75.6% |
| 3708535 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 52.0 | 3.57e-01 | 98.5% | 21.8% |
| 54315 | 633.16.1.0 ↗ | alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like | 0.73 | 63.0 | 5.70e-01 | 100.0% | 71.1% |
| 4065692 | 622.1.1.0 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain | 0.73 | 61.0 | 5.44e-01 | 90.8% | 75.6% |
| 3998693 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.73 | 63.0 | 3.82e-01 | 95.4% | 64.2% |
| 3917160 | 3543.1.1.0 ↗ | alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel | 0.73 | 63.0 | 4.55e-01 | 100.0% | 37.9% |
| 4016845 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.73 | 61.0 | 5.46e-01 | 90.8% | 75.6% |
| 4862607 | 633.16.1.2 ↗ | alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like › TcdB_N | 0.72 | 63.0 | 5.73e-01 | 100.0% | 73.0% |
| 55853 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.72 | 62.0 | 4.89e-01 | 100.0% | 89.0% |
| 4123602 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.72 | 52.0 | 4.68e-01 | 87.7% | 55.6% |
| 3955636 | 604.12.1.106 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › PF28475 | 0.71 | 62.0 | 5.99e-01 | 100.0% | 90.7% |
| 4099493 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.70 | 61.0 | 5.40e-01 | 96.9% | 75.8% |
| 3725482 | 601.16.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase | 0.70 | 61.0 | 5.05e-01 | 100.0% | 65.8% |
| 3788338 | 604.12.1.9 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 | 0.70 | 61.0 | 5.93e-01 | 100.0% | 87.8% |
| 3641813 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.70 | 63.0 | 5.53e-01 | 100.0% | 88.4% |
| 1719257 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.70 | 64.0 | 4.61e-01 | 100.0% | 64.4% |
| 3278268 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.70 | 60.0 | 4.47e-01 | 100.0% | 37.1% |
| 3231047 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.70 | 59.0 | 4.74e-01 | 100.0% | 56.4% |
| 4411992 | 3710.1.1.1 ↗ | alpha bundles › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › CHD5 | 0.69 | 50.0 | 4.30e-01 | 76.9% | 47.6% |
| 3737294 | 604.13.1.1 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like › USP8_dimer | 0.69 | 61.0 | 5.01e-01 | 100.0% | 56.7% |
| 3271163 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 47.0 | 3.76e-01 | 70.8% | 40.8% |
| 3596384 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 60.0 | 3.79e-01 | 100.0% | 47.8% |
| 3911474 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.68 | 59.0 | 3.97e-01 | 100.0% | 84.7% |
| 434744 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.68 | 60.0 | 4.02e-01 | 100.0% | 88.4% |
| 3208614 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.67 | 58.0 | 4.77e-01 | 100.0% | 72.8% |
| 3777056 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.67 | 56.0 | 4.47e-01 | 100.0% | 64.0% |
| 3686452 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.67 | 58.0 | 4.89e-01 | 100.0% | 66.1% |
| 3415759 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.67 | 53.0 | 4.85e-01 | 86.2% | 75.3% |
| 4002718 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.67 | 59.0 | 4.15e-01 | 100.0% | 87.6% |
| 4982222 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.67 | 57.0 | 5.32e-01 | 100.0% | 82.4% |
| 3622123 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.67 | 57.0 | 4.45e-01 | 100.0% | 74.0% |
| 3264196 | 5067.1.1.13 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › ALMT | 0.65 | 57.0 | 4.23e-01 | 96.9% | 39.4% |
| 3512558 | 109.6.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF | 0.65 | 54.0 | 3.31e-01 | 95.4% | 22.8% |
| 4102269 | 604.34.1.1 ↗ | alpha bundles › Spectrin repeat-like › Helical bundle domain in arginine decarboxylase › Helical bundle domain in arginine decarboxylase › Arg_decarb_HB | 0.64 | 55.0 | 4.88e-01 | 96.9% | 66.3% |
| 5078101 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 56.0 | 3.77e-01 | 100.0% | 41.5% |
| 3561892 | 4106.1.1.0 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack | 0.63 | 53.0 | 4.23e-01 | 100.0% | 79.3% |
| 3785074 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.58 | 51.0 | 2.89e-01 | 100.0% | 8.4% |
| 1208317 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.57 | 44.0 | 3.72e-01 | 87.7% | 48.7% |