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CAKLQF020000016.1__CAH1088172.1__SAMEA5780031_02853__00075
Bact-VirCAKLQF020000016.1__CAH1088172.1__SAMEA5780031_02853__00075
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-128
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.76 | 70.0 | 6.69e-01 | 98.9% | 96.2% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.76 | 69.0 | 6.57e-01 | 98.9% | 95.4% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.75 | 58.0 | 6.32e-01 | 81.9% | 100.0% |
| 3pcrA01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.74 | 40.0 | 4.06e-01 | 72.3% | 53.2% |
| 4u3qB00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.72 | 67.0 | 6.59e-01 | 98.9% | 93.9% |
| 1z24A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.70 | 63.0 | 5.02e-01 | 98.9% | 62.4% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.70 | 64.0 | 6.14e-01 | 100.0% | 92.5% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.68 | 59.0 | 5.05e-01 | 96.8% | 80.9% |
| 3ia8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.68 | 60.0 | 5.02e-01 | 98.9% | 95.7% |
| 2m4lA00 | 2.40.128.360 | Mainly Beta › Beta Barrel › Lipocalin › | 0.67 | 58.0 | 5.77e-01 | 98.9% | 89.9% |
| 2mhdA00 | 2.40.128.370 | Mainly Beta › Beta Barrel › Lipocalin › | 0.67 | 59.0 | 5.66e-01 | 98.9% | 90.0% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.66 | 58.0 | 4.79e-01 | 100.0% | 92.6% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.65 | 55.0 | 5.66e-01 | 96.8% | 98.9% |
| 1p6pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.64 | 55.0 | 5.01e-01 | 94.7% | 99.2% |
| 4kc7A02 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 56.0 | 5.53e-01 | 98.9% | 97.0% |
| 2w7qB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.63 | 56.0 | 4.56e-01 | 100.0% | 81.7% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.62 | 54.0 | 4.86e-01 | 97.9% | 99.3% |
| 2o62A02 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 54.0 | 4.82e-01 | 100.0% | 97.1% |
| 7nn3B01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 46.0 | 3.22e-01 | 80.9% | 49.4% |
| 3g7gH00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.61 | 50.0 | 4.31e-01 | 91.5% | 81.6% |
| 1nycA00 | 2.40.310.10 | Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors | 0.60 | 52.0 | 4.94e-01 | 100.0% | 81.1% |
| 2l9pA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 49.0 | 4.16e-01 | 96.8% | 78.7% |
| 2zf3C00 | 2.50.20.30 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.57 | 51.0 | 4.12e-01 | 98.9% | 90.1% |
| 2m7oA00 | 3.10.450.400 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 | 0.57 | 37.0 | 4.14e-01 | 91.5% | 88.6% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 48.0 | 4.35e-01 | 97.9% | 80.7% |
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.56 | 50.0 | 4.04e-01 | 100.0% | 83.6% |
| 3p0lD00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 46.0 | 3.80e-01 | 94.7% | 64.3% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.55 | 46.0 | 4.00e-01 | 91.5% | 75.3% |
| 1a87A01 | 3.30.1120.60 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin | 0.54 | 39.0 | 3.91e-01 | 76.6% | 84.5% |
| 4fa8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 4.01e-01 | 90.4% | 77.9% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 45.0 | 3.38e-01 | 100.0% | 98.8% |
| 4nzfD02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 36.0 | 3.70e-01 | 83.0% | 76.7% |
| 2p18A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 44.0 | 3.19e-01 | 96.8% | 86.6% |
| 4nehA01 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.51 | 42.0 | 2.84e-01 | 91.5% | 41.5% |
| 3flpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 3.32e-01 | 93.6% | 71.4% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1402067 | 9.1.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › NlpE | 0.75 | 65.0 | 6.61e-01 | 98.9% | 93.5% |
| 1291144 | 9.1.1.27 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_C | 0.73 | 66.0 | 6.10e-01 | 98.9% | 91.5% |
| 3939467 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.69 | 41.0 | 3.83e-01 | 93.6% | 47.5% |
| 5006845 | 295.1.1.27 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF25991 | 0.68 | 38.0 | 4.75e-01 | 81.9% | 94.5% |
| 868783 | 9.16.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 › DUF5640 | 0.67 | 58.0 | 5.77e-01 | 98.9% | 89.9% |
| 4380184 | 9.11.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC | 0.66 | 56.0 | 5.80e-01 | 93.6% | 100.0% |
| 4927832 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.65 | 56.0 | 5.33e-01 | 94.7% | 92.7% |
| 3964595 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.64 | 50.0 | 5.22e-01 | 97.9% | 94.1% |
| 3279724 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.62 | 53.0 | 4.76e-01 | 93.6% | 83.8% |
| 4635523 | 331.3.1.20 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C | 0.61 | 47.0 | 3.48e-01 | 84.0% | 67.1% |
| 3510681 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 42.0 | 4.62e-01 | 93.6% | 96.0% |
| 3254492 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.57 | 43.0 | 3.79e-01 | 92.6% | 54.3% |
| 3228776 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.57 | 38.0 | 2.72e-01 | 93.6% | 22.0% |
| 1066273 | 331.3.1.12 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › STK_08120-like | 0.56 | 48.0 | 4.35e-01 | 97.9% | 80.7% |
| 4606998 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.56 | 50.0 | 3.99e-01 | 100.0% | 61.1% |
| 3703463 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.55 | 45.0 | 2.52e-01 | 88.3% | 11.1% |
| 3989353 | 9.9.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 | 0.55 | 44.0 | 4.12e-01 | 92.6% | 98.4% |
| 3710725 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 44.0 | 2.89e-01 | 88.3% | 30.6% |
| 5014493 | 331.3.1.12 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › STK_08120-like | 0.54 | 47.0 | 3.57e-01 | 96.8% | 44.3% |
| 3719326 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 43.0 | 2.86e-01 | 86.2% | 38.5% |
| 4958282 | 12.3.1.14 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III | 0.54 | 47.0 | 3.26e-01 | 100.0% | 87.1% |
| 3781145 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.53 | 40.0 | 3.42e-01 | 83.0% | 81.2% |
| 1547989 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 41.0 | 2.85e-01 | 85.1% | 42.0% |
| 3743943 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.53 | 42.0 | 2.72e-01 | 86.2% | 32.8% |
| 3488355 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.52 | 43.0 | 3.65e-01 | 93.6% | 70.0% |
| 4630719 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.52 | 37.0 | 3.81e-01 | 85.1% | 77.8% |
| 5004981 | 3335.1.1.0 ↗ | beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B | 0.52 | 34.0 | 3.84e-01 | 94.7% | 96.9% |
| 4256135 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.51 | 45.0 | 3.65e-01 | 100.0% | 68.9% |
| 3398830 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.51 | 43.0 | 3.60e-01 | 94.7% | 71.2% |
| 3507448 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.51 | 42.0 | 3.40e-01 | 94.7% | 79.0% |
| 3754155 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.51 | 42.0 | 2.86e-01 | 93.6% | 29.9% |
| 3889733 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.51 | 42.0 | 3.45e-01 | 93.6% | 63.2% |
| 4243044 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.51 | 45.0 | 3.72e-01 | 98.9% | 73.5% |
| 4990115 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.51 | 38.0 | 3.90e-01 | 84.0% | 82.2% |
| 3784764 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.51 | 43.0 | 2.94e-01 | 93.6% | 37.1% |
| 3586270 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 37.0 | 2.46e-01 | 78.7% | 27.4% |
| 5054509 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.50 | 41.0 | 3.32e-01 | 91.5% | 58.5% |
| 5012271 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.50 | 40.0 | 2.84e-01 | 91.5% | 26.3% |
| 3188230 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 43.0 | 3.01e-01 | 93.6% | 67.9% |
| 4232261 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.50 | 41.0 | 3.51e-01 | 93.6% | 74.5% |