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CAKLQF020000017.1__CAH1088270.1__SAMEA5780031_02871__00003

Bact-Vir

CAKLQF020000017.1__CAH1088270.1__SAMEA5780031_02871__00003

Identity

Kingdom:
phage

Quality

83.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-105
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01740.27 best STAS 34.6 2.00e-08 99.0% 85.9%
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1h4xA00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.88 82.0 7.92e-01 100.0% 89.2%
6m37B01 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.86 78.0 7.90e-01 99.0% 100.0%
4qtpD00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.85 77.0 7.37e-01 100.0% 86.1%
1auzA00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.84 78.0 7.47e-01 100.0% 87.1%
3f43A01 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.84 76.0 7.37e-01 97.0% 89.0%
4xs5B00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.82 72.0 6.97e-01 99.0% 84.2%
4hylA00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.82 74.0 7.12e-01 100.0% 87.6%
2vy9A00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.82 74.0 7.11e-01 98.0% 86.8%
3t6oA00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.81 75.0 7.10e-01 100.0% 89.0%
3if5A02 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.81 63.0 6.68e-01 88.1% 93.3%
6xgzB01 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.79 66.0 6.92e-01 96.0% 100.0%
4dghA00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.79 69.0 6.37e-01 95.0% 75.0%
1vc1A00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.78 70.0 6.85e-01 100.0% 92.7%
4dgfA00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.77 69.0 6.45e-01 97.0% 82.8%
7d06C01 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.76 59.0 6.35e-01 89.1% 100.0%
3bf0C01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.75 64.0 5.09e-01 93.1% 47.8%
3lklA00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.75 61.0 6.30e-01 88.1% 94.6%
3ny7A00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.74 66.0 6.33e-01 100.0% 88.1%
3lloA00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.72 65.0 5.97e-01 100.0% 87.9%
3simA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.71 64.0 4.67e-01 100.0% 53.8%
5o34C00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.71 59.0 4.72e-01 99.0% 46.4%
2ookA00 3.40.50.10600 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SpoIIaa-like domains 0.70 63.0 5.89e-01 100.0% 87.2%
2o55A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.69 62.0 4.58e-01 98.0% 57.1%
1eucB03 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.67 60.0 5.29e-01 99.0% 83.6%
6qelJ01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 58.0 4.81e-01 97.0% 92.1%
3n4eA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.65 58.0 4.30e-01 99.0% 51.1%
7lnpA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 58.0 3.97e-01 99.0% 47.4%
3ghfA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 50.0 5.09e-01 92.1% 85.0%
4jz5A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 56.0 4.48e-01 100.0% 57.8%
3lkdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 48.0 3.48e-01 84.2% 29.1%
1mjgM02 3.40.50.2030 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 55.0 4.46e-01 95.0% 79.9%
3eccA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 54.0 4.64e-01 96.0% 73.5%
2ljaA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 40.0 3.50e-01 74.3% 43.4%
3e02A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 54.0 3.86e-01 99.0% 59.2%
1vh7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 53.0 4.01e-01 97.0% 48.0%
2dgmA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.61 51.0 3.73e-01 94.1% 40.1%
4yo7A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 52.0 4.83e-01 94.1% 78.5%
2r60A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.60 51.0 3.92e-01 94.1% 78.4%
1gg4A01 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.60 50.0 4.59e-01 99.0% 68.4%
1id1A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 51.0 4.45e-01 95.0% 79.7%
3ksmA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 50.0 4.38e-01 93.1% 74.7%
3ejfA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.59 49.0 4.17e-01 91.1% 80.7%
6xehA01 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 49.0 4.79e-01 91.1% 83.8%
4ml3D00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 50.0 4.58e-01 93.1% 80.9%
2o8bB05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 50.0 3.88e-01 96.0% 48.3%
4g1vA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.58 46.0 4.18e-01 96.0% 63.2%
2c61A00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 50.0 3.38e-01 100.0% 55.0%
5t3uB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.58 44.0 4.06e-01 100.0% 62.4%
3gdwB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.57 43.0 3.88e-01 100.0% 58.0%
4jc0B01 3.40.50.12160 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylthiotransferase, N-terminal domain 0.55 46.0 4.31e-01 92.1% 75.8%
3bamA00 3.40.91.20 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.53 48.0 3.79e-01 100.0% 58.3%
3odhA00 3.40.91.20 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.52 47.0 3.80e-01 100.0% 60.8%
3drnB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 41.0 3.65e-01 96.0% 60.0%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3969700 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.97 93.0 9.03e-01 99.0% 90.9%
11462 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.88 82.0 7.92e-01 100.0% 89.2%
3278437 2496.1.1.5 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS_2 0.87 78.0 7.63e-01 100.0% 88.2%
11463 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.87 81.0 7.72e-01 100.0% 87.8%
4952186 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.85 78.0 7.57e-01 100.0% 90.0%
4468651 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.84 78.0 7.56e-01 100.0% 90.9%
1314498 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.84 77.0 7.33e-01 100.0% 85.3%
4674560 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.84 79.0 7.07e-01 100.0% 88.1%
4228838 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.84 77.0 7.46e-01 100.0% 90.9%
3974592 2496.1.1.5 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS_2 0.83 76.0 7.67e-01 99.0% 99.0%
169543 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.83 76.0 7.31e-01 100.0% 88.5%
3959968 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.83 70.0 7.08e-01 91.1% 91.0%
991597 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.83 76.0 7.32e-01 100.0% 88.6%
4952174 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.82 76.0 7.23e-01 100.0% 87.0%
3289354 2496.1.1.5 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS_2 0.82 71.0 7.06e-01 100.0% 89.5%
3685610 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.82 76.0 6.43e-01 100.0% 91.3%
3279675 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.82 76.0 7.39e-01 100.0% 91.8%
3967030 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.82 73.0 7.35e-01 99.0% 97.0%
1038794 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.81 75.0 7.10e-01 100.0% 89.0%
3960730 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.81 75.0 6.93e-01 100.0% 82.4%
1498185 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.81 75.0 6.99e-01 100.0% 82.8%
3284133 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.81 73.0 6.99e-01 99.0% 86.1%
154202 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.81 73.0 7.00e-01 100.0% 86.1%
3698359 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.80 73.0 5.56e-01 100.0% 77.4%
5053391 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.80 74.0 6.84e-01 100.0% 84.0%
5051916 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.79 72.0 6.72e-01 100.0% 88.6%
3586882 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.79 73.0 6.65e-01 100.0% 85.4%
3926452 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.79 72.0 5.71e-01 100.0% 70.0%
3288712 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.79 71.0 6.55e-01 97.0% 90.4%
138986 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.79 69.0 6.37e-01 95.0% 75.0%
3294125 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.79 72.0 6.00e-01 100.0% 78.8%
3744130 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.79 71.0 5.51e-01 100.0% 87.3%
3667361 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.79 72.0 6.06e-01 100.0% 81.1%
3970825 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.78 69.0 6.75e-01 96.0% 90.0%
3826072 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.78 71.0 6.24e-01 100.0% 83.9%
3937689 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.78 71.0 6.22e-01 100.0% 86.7%
3740596 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.78 71.0 5.41e-01 100.0% 87.4%
3629417 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.78 71.0 5.74e-01 100.0% 74.6%
3174873 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.78 71.0 5.63e-01 100.0% 92.5%
3171216 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.78 71.0 5.50e-01 100.0% 81.8%
11464 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.78 70.0 6.85e-01 100.0% 92.7%
2792047 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.77 70.0 6.41e-01 100.0% 78.0%
4944017 2486.1.1.7 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 0.77 71.0 5.12e-01 100.0% 61.5%
3966695 2496.1.1.5 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS_2 0.77 67.0 6.80e-01 98.0% 97.0%
4235758 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.77 67.0 6.87e-01 98.0% 100.0%
3960577 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.77 70.0 6.73e-01 100.0% 88.7%
3405177 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.77 69.0 6.30e-01 100.0% 78.5%
3784939 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.77 67.0 5.23e-01 97.0% 88.2%
2526040 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.77 69.0 6.59e-01 100.0% 86.4%
3352027 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.76 69.0 5.57e-01 100.0% 68.2%
5075843 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.76 70.0 6.52e-01 100.0% 82.9%
2702519 2496.1.1.5 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS_2 0.76 65.0 6.70e-01 100.0% 100.0%
3957136 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.76 69.0 6.61e-01 100.0% 87.8%
3601167 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.76 68.0 5.60e-01 100.0% 73.0%
1839909 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.75 68.0 6.35e-01 100.0% 84.0%
3165211 2496.1.1.5 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS_2 0.75 67.0 6.67e-01 99.0% 99.0%
1174292 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.75 64.0 4.79e-01 93.1% 39.3%
3956491 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.75 68.0 6.34e-01 100.0% 82.4%
3980038 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.75 67.0 6.38e-01 100.0% 86.7%
4007097 2486.1.1.5 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 0.75 65.0 3.97e-01 95.0% 18.9%
3593334 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.74 66.0 5.65e-01 100.0% 88.5%
3164821 2486.1.1.8 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41,DUF3340 0.73 67.0 4.54e-01 100.0% 36.6%
118104 2496.1.1.4 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › SpoIIAA-like 0.71 65.0 6.17e-01 100.0% 85.8%
5056387 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.71 64.0 5.98e-01 100.0% 86.4%
5068744 2007.3.1.6 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 0.70 60.0 5.13e-01 93.1% 85.6%
11465 2496.1.1.4 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › SpoIIAA-like 0.70 63.0 5.89e-01 100.0% 87.2%
3402825 2486.1.1.1 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.70 63.0 4.82e-01 100.0% 50.4%
3929333 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.68 58.0 4.68e-01 93.1% 83.6%
4979280 2007.3.1.0 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.68 58.0 4.98e-01 93.1% 85.6%
4003239 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.68 58.0 4.59e-01 93.1% 87.3%
4927931 2007.3.1.0 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.68 58.0 5.21e-01 93.1% 81.2%
4844616 2486.1.1.3 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans 0.67 61.0 5.65e-01 100.0% 87.4%
3957164 2007.3.1.0 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.67 60.0 5.13e-01 100.0% 79.4%
4114769 2007.3.1.1 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA 0.66 58.0 4.97e-01 99.0% 77.4%
5069208 2007.3.1.1 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA 0.66 58.0 4.94e-01 99.0% 78.2%
5047937 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 55.0 4.76e-01 94.1% 79.4%
3812948 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.63 57.0 3.60e-01 100.0% 20.6%
3659461 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.63 53.0 4.83e-01 94.1% 77.9%
3936405 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.62 53.0 4.19e-01 93.1% 83.3%
5013576 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.62 51.0 3.74e-01 92.1% 34.8%
5055417 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.61 54.0 4.53e-01 99.0% 93.7%
3279820 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.60 52.0 4.62e-01 97.0% 65.8%
4356125 2002.1.1.43 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth 0.60 53.0 3.91e-01 100.0% 82.4%
4552252 2007.9.1.4 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 0.59 49.0 4.44e-01 94.1% 82.1%
3501020 7516.1.1.16 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_43 0.52 45.0 3.19e-01 93.1% 33.8%
4626033 2008.1.1.5 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C 0.50 44.0 4.23e-01 100.0% 85.0%
D2 high residues 125-171
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hhcC00 1.20.1250.60 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interferon lambda 0.94 83.0 5.63e-01 95.7% 29.8%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.92 80.0 6.75e-01 100.0% 59.5%
3k6tB00 1.20.5.4010 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.91 72.0 7.12e-01 100.0% 81.6%
4b6xA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.90 81.0 7.04e-01 100.0% 75.4%
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.90 71.0 7.04e-01 85.1% 95.9%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.89 76.0 6.28e-01 100.0% 54.3%
2oh3A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.87 77.0 5.37e-01 100.0% 34.0%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.87 78.0 7.00e-01 100.0% 78.1%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.86 75.0 6.88e-01 95.7% 96.7%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.86 73.0 6.36e-01 100.0% 63.4%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.85 68.0 6.32e-01 87.2% 100.0%
2jdiG01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.85 65.0 5.95e-01 100.0% 63.9%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.85 71.0 6.38e-01 100.0% 67.7%
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.85 76.0 6.38e-01 100.0% 61.5%
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.84 73.0 6.66e-01 100.0% 81.0%
4abxA02 6.10.140.1090 Special › Helix non-globular › Helix Hairpins › 0.83 69.0 5.58e-01 100.0% 49.4%
7ymiZ01 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.82 72.0 6.73e-01 100.0% 81.0%
4uelA02 1.20.58.860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 71.0 6.19e-01 100.0% 66.7%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.81 69.0 6.21e-01 100.0% 89.6%
3jcuZ00 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.80 68.0 6.37e-01 100.0% 80.3%
4mhlA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.80 72.0 4.89e-01 100.0% 95.0%
1vmgA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.80 58.0 4.92e-01 100.0% 46.3%
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.77 67.0 6.22e-01 97.9% 78.0%
1x0tA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.77 60.0 5.54e-01 87.2% 72.1%
1rtwB00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.76 65.0 4.25e-01 100.0% 23.1%
3t9jA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.72 58.0 4.22e-01 100.0% 31.2%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.70 60.0 5.00e-01 100.0% 59.3%
3nymA00 6.10.290.10 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.70 56.0 4.33e-01 100.0% 37.1%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.70 57.0 4.90e-01 100.0% 57.6%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.69 56.0 5.22e-01 100.0% 90.6%
1bhaA00 1.10.287.170 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.69 58.0 5.25e-01 100.0% 74.6%
2yxhA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.68 52.0 4.19e-01 100.0% 39.8%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.67 53.0 4.90e-01 100.0% 67.6%
2x2vA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.67 55.0 5.00e-01 97.9% 70.6%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 49.0 3.99e-01 89.4% 79.4%
2yevA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 52.0 4.73e-01 100.0% 63.5%
4u1cA01 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.64 47.0 4.65e-01 95.7% 78.8%
4a4kA01 1.20.1500.20 Mainly Alpha › Up-down Bundle › YheA-like fold › 0.63 51.0 4.04e-01 100.0% 42.5%
5b1oA00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.61 46.0 4.38e-01 95.7% 70.8%
5svlA01 1.10.287.940 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel 0.61 51.0 4.60e-01 100.0% 67.6%
3qf7A02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.61 49.0 4.61e-01 100.0% 79.4%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3606007 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.95 88.0 6.05e-01 100.0% 33.6%
3211407 3652.1.1.0 alpha duplicates or obligate multimers › Qua1 › Qua1 › Qua1 0.93 74.0 7.25e-01 100.0% 80.0%
3356293 192.4.1.22 alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › PF26575 0.92 73.0 6.70e-01 100.0% 66.7%
3411668 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.91 80.0 6.73e-01 95.7% 60.0%
3323995 3652.1.1.3 alpha duplicates or obligate multimers › Qua1 › Qua1 › Qua1 › PF26575 0.90 72.0 6.36e-01 100.0% 61.5%
3928281 3652.1.1.2 alpha duplicates or obligate multimers › Qua1 › Qua1 › Qua1 › STAR_dimer 0.89 71.0 7.23e-01 100.0% 88.9%
4601944 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.89 78.0 6.56e-01 95.7% 92.0%
4520081 192.5.1.20 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › Val_tRNA-synt_C 0.87 80.0 7.29e-01 100.0% 90.0%
3698138 5055.1.1.0 extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel 0.86 77.0 6.27e-01 100.0% 56.5%
3602213 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 65.0 4.55e-01 85.1% 29.7%
4106620 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.83 73.0 6.23e-01 100.0% 68.0%
2663455 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.82 71.0 6.36e-01 100.0% 70.6%
4367294 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.80 62.0 5.97e-01 100.0% 74.1%
3419256 3652.1.1.2 alpha duplicates or obligate multimers › Qua1 › Qua1 › Qua1 › STAR_dimer 0.78 66.0 6.47e-01 91.5% 94.0%
3485413 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.77 65.0 6.43e-01 97.9% 92.0%
5039030 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.75 64.0 6.12e-01 97.9% 83.6%
4595410 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.69 55.0 5.12e-01 100.0% 83.1%
3270838 3184.1.1.1 alpha bundles › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain › CSTF2_hinge 0.68 53.0 4.71e-01 87.2% 64.3%
4181677 192.29.1.272 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Val_tRNA-synt_C 0.68 55.0 4.98e-01 100.0% 67.1%
4010384 361.1.1.0 few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.66 53.0 4.93e-01 100.0% 86.2%
4299170 192.7.1.4 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Val_tRNA-synt_C 0.65 51.0 4.72e-01 100.0% 67.1%
4013585 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.65 50.0 4.68e-01 100.0% 87.1%