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CAKLQF020000017.1__CAH1088332.1__SAMEA5780031_02903__00034
Bact-VirCAKLQF020000017.1__CAH1088332.1__SAMEA5780031_02903__00034
Identity
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-96
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04751.21 best | DarP | 75.8 | 4.80e-21 | 100.0% | 47.7% |
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p0tA01 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.89 | 76.0 | 7.61e-01 | 92.0% | 89.5% |
| 3t66A02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.72 | 57.0 | 4.03e-01 | 84.0% | 76.8% |
| 3rqtA02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.71 | 56.0 | 3.98e-01 | 84.0% | 76.1% |
| 7kz9A02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.70 | 56.0 | 3.99e-01 | 84.0% | 77.4% |
| 4ewcA03 | 1.20.120.1660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.70 | 53.0 | 5.33e-01 | 80.0% | 93.3% |
| 1uiuA02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.70 | 54.0 | 3.84e-01 | 84.0% | 76.8% |
| 1uqwA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.69 | 55.0 | 3.84e-01 | 84.0% | 75.1% |
| 3iqtA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.69 | 52.0 | 4.51e-01 | 80.0% | 64.9% |
| 3hl6A02 | 1.20.58.700 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 49.0 | 4.27e-01 | 74.7% | 67.0% |
| 6z74C02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.69 | 55.0 | 4.31e-01 | 86.7% | 91.8% |
| 2wolA02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.69 | 54.0 | 3.79e-01 | 84.0% | 76.6% |
| 4oevA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.69 | 55.0 | 3.91e-01 | 86.7% | 79.5% |
| 3tpaA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.68 | 56.0 | 3.96e-01 | 88.0% | 77.1% |
| 6i3gA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.68 | 56.0 | 4.01e-01 | 88.0% | 78.0% |
| 6epyA01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.68 | 56.0 | 3.78e-01 | 88.0% | 74.6% |
| 1dd5A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.67 | 38.0 | 3.31e-01 | 86.7% | 38.5% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.67 | 48.0 | 4.22e-01 | 77.3% | 88.8% |
| 5isuA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.67 | 55.0 | 3.92e-01 | 88.0% | 77.3% |
| 4ze8A03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.67 | 54.0 | 3.91e-01 | 88.0% | 77.6% |
| 8azbA01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.67 | 55.0 | 3.86e-01 | 88.0% | 82.5% |
| 6wm6A01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.66 | 53.0 | 3.77e-01 | 88.0% | 83.8% |
| 1xocA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.65 | 55.0 | 3.90e-01 | 92.0% | 80.4% |
| 1zu0A03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.65 | 54.0 | 3.74e-01 | 90.7% | 70.7% |
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.65 | 54.0 | 4.60e-01 | 97.3% | 64.4% |
| 7vevA01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.65 | 53.0 | 3.67e-01 | 88.0% | 75.8% |
| 3vadA01 | 1.20.140.20 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain | 0.64 | 48.0 | 3.81e-01 | 80.0% | 67.9% |
| 7wf8B01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.64 | 49.0 | 4.20e-01 | 82.7% | 100.0% |
| 1v9mA03 | 1.20.1690.10 | Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain | 0.64 | 43.0 | 4.02e-01 | 70.7% | 67.7% |
| 3ry3A02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.63 | 51.0 | 3.58e-01 | 88.0% | 78.3% |
| 3lsjA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 45.0 | 3.65e-01 | 77.3% | 72.5% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.61 | 50.0 | 4.09e-01 | 93.3% | 86.3% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 47.0 | 4.70e-01 | 96.0% | 84.2% |
| 2ijeS00 | 1.10.840.10 | Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain | 0.60 | 43.0 | 3.06e-01 | 76.0% | 74.3% |
| 1c17M00 | 1.20.120.220 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ATP synthase, F0 complex, subunit A | 0.60 | 43.0 | 3.49e-01 | 74.7% | 95.8% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 46.0 | 4.80e-01 | 100.0% | 100.0% |
| 2oo2A00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.59 | 43.0 | 4.32e-01 | 77.3% | 80.3% |
| 4cs9B02 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.59 | 50.0 | 4.55e-01 | 98.7% | 97.2% |
| 1e3mB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.58 | 41.0 | 3.33e-01 | 76.0% | 82.2% |
| 5iduA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.57 | 40.0 | 3.50e-01 | 73.3% | 61.7% |
| 1ezwA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.57 | 49.0 | 3.22e-01 | 98.7% | 25.9% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 34.0 | 3.50e-01 | 74.7% | 64.4% |
| 2g3vA00 | 1.20.120.1140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CAG pathogenicity island protein 13, CagS | 0.54 | 43.0 | 3.41e-01 | 88.0% | 57.1% |
| 3u60A02 | 1.20.272.50 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › Bacteriophage clamp loader A subunit, A' domain | 0.54 | 40.0 | 4.02e-01 | 94.7% | 79.5% |
| 3c8zA02 | 1.20.120.640 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.54 | 42.0 | 4.14e-01 | 94.7% | 78.3% |
| 7smgD00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.54 | 37.0 | 3.14e-01 | 73.3% | 47.2% |
| 2qffA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.53 | 43.0 | 4.38e-01 | 100.0% | 90.5% |
| 7craA02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 47.0 | 4.39e-01 | 100.0% | 91.3% |
| 4gc0A02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.53 | 47.0 | 3.31e-01 | 98.7% | 46.5% |
| 2pmsC00 | 6.10.140.920 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 37.0 | 3.23e-01 | 80.0% | 50.5% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.52 | 46.0 | 3.98e-01 | 100.0% | 82.2% |
| 3o4yA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 38.0 | 3.34e-01 | 81.3% | 54.5% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4106110 | 4338.1.1.1 ↗ | alpha complex topology › PSPTO4464 N-terminal domain-like › PSPTO4464 N-terminal domain-like › PSPTO4464 N-terminal domain-like › DUF615 | 0.93 | 88.0 | 8.38e-01 | 100.0% | 88.2% |
| 3963819 | 4338.1.1.1 ↗ | alpha complex topology › PSPTO4464 N-terminal domain-like › PSPTO4464 N-terminal domain-like › PSPTO4464 N-terminal domain-like › DUF615 | 0.90 | 79.0 | 7.94e-01 | 93.3% | 93.3% |
| 4427522 | 4338.1.1.1 ↗ | alpha complex topology › PSPTO4464 N-terminal domain-like › PSPTO4464 N-terminal domain-like › PSPTO4464 N-terminal domain-like › DUF615 | 0.86 | 79.0 | 7.41e-01 | 100.0% | 86.7% |
| 3945962 | 4338.1.1.1 ↗ | alpha complex topology › PSPTO4464 N-terminal domain-like › PSPTO4464 N-terminal domain-like › PSPTO4464 N-terminal domain-like › DUF615 | 0.85 | 77.0 | 7.36e-01 | 100.0% | 87.1% |
| 4962160 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.71 | 57.0 | 4.10e-01 | 86.7% | 77.6% |
| 4943968 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.70 | 53.0 | 4.17e-01 | 78.7% | 45.5% |
| 3282950 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.70 | 58.0 | 4.03e-01 | 88.0% | 75.2% |
| 5017761 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.70 | 55.0 | 3.88e-01 | 84.0% | 78.2% |
| 4986479 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.70 | 57.0 | 4.03e-01 | 86.7% | 77.6% |
| 3387695 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.69 | 56.0 | 3.93e-01 | 86.7% | 77.8% |
| 4962241 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.69 | 54.0 | 3.81e-01 | 84.0% | 76.5% |
| 3994165 | 633.16.1.0 ↗ | alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like | 0.69 | 50.0 | 4.89e-01 | 76.0% | 83.7% |
| 3494149 | 601.1.2.6 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Talin_IBS2B | 0.68 | 50.0 | 3.91e-01 | 78.7% | 58.8% |
| 4933463 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.68 | 54.0 | 3.87e-01 | 85.3% | 76.4% |
| None | — | 0.68 | 49.0 | 3.51e-01 | 74.7% | 28.1% | |
| 3285988 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.68 | 57.0 | 3.92e-01 | 89.3% | 70.6% |
| 4165877 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.68 | 56.0 | 3.96e-01 | 89.3% | 76.9% |
| 3245000 | 4338.1.1.0 ↗ | alpha complex topology › PSPTO4464 N-terminal domain-like › PSPTO4464 N-terminal domain-like › PSPTO4464 N-terminal domain-like | 0.67 | 54.0 | 5.26e-01 | 89.3% | 95.3% |
| 3949174 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.67 | 56.0 | 3.92e-01 | 89.3% | 72.7% |
| 4961520 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.67 | 55.0 | 3.88e-01 | 88.0% | 78.6% |
| 3701078 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.67 | 47.0 | 3.93e-01 | 74.7% | 78.5% |
| 4528499 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.67 | 55.0 | 3.87e-01 | 89.3% | 77.8% |
| 3809677 | 101.1.2.79 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 | 0.66 | 54.0 | 4.61e-01 | 90.7% | 64.0% |
| 5022179 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.66 | 54.0 | 4.83e-01 | 88.0% | 89.5% |
| 4938673 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.66 | 45.0 | 4.83e-01 | 74.7% | 81.5% |
| 3262893 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 56.0 | 4.70e-01 | 94.7% | 59.2% |
| 2429518 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.66 | 56.0 | 3.98e-01 | 92.0% | 77.2% |
| 3177312 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.66 | 49.0 | 3.99e-01 | 78.7% | 90.7% |
| 4963749 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.66 | 53.0 | 3.69e-01 | 88.0% | 77.6% |
| 2791 | 101.1.4.20 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 | 0.65 | 53.0 | 5.02e-01 | 97.3% | 75.3% |
| 4946174 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 44.0 | 4.16e-01 | 70.7% | 63.3% |
| 3892225 | 6157.1.1.1 ↗ | alpha bundles › GKAP homology domain 1 › GKAP homology domain 1 › GKAP homology domain 1 › GKAP | 0.64 | 45.0 | 3.87e-01 | 72.0% | 79.1% |
| 5047076 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.63 | 54.0 | 3.58e-01 | 98.7% | 26.4% |
| 3286065 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.59 | 42.0 | 4.39e-01 | 76.0% | 91.4% |
| 3646192 | 611.7.1.11 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › DUF7032 | 0.57 | 41.0 | 3.46e-01 | 76.0% | 65.4% |
| 3717847 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.54 | 37.0 | 3.02e-01 | 73.3% | 83.1% |
| 4329760 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.53 | 46.0 | 3.81e-01 | 100.0% | 78.6% |
| 3431353 | 1128.1.1.10 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › VIN3_C | 0.53 | 36.0 | 3.69e-01 | 70.7% | 75.7% |
| 4146104 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.52 | 43.0 | 4.20e-01 | 98.7% | 82.4% |
| 3458091 | 632.1.1.13 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Rx_N | 0.52 | 45.0 | 4.37e-01 | 98.7% | 94.1% |
| 3739998 | 5068.1.1.1 ↗ | alpha bundles › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › Cytochrom_B_C | 0.51 | 37.0 | 3.18e-01 | 77.3% | 63.2% |
| 3839677 | 5068.1.1.1 ↗ | alpha bundles › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › Cytochrom_B_C | 0.51 | 37.0 | 3.30e-01 | 78.7% | 71.3% |
| 1674680 | 4085.1.1.1 ↗ | alpha arrays › RbcX-like › RbcX-like › RbcX-like › RbcX | 0.51 | 44.0 | 3.81e-01 | 100.0% | 61.0% |
| 4214525 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.51 | 44.0 | 4.06e-01 | 98.7% | 96.0% |
D2
high
residues 100-176
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04751.21 best | DarP | 26.6 | 6.90e-06 | 90.9% | 32.7% |
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.91 | 79.0 | 8.23e-01 | 97.4% | 98.6% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.74 | 65.0 | 5.38e-01 | 96.1% | 96.3% |
| 4k0dA00 | 1.20.120.1730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.73 | 61.0 | 5.00e-01 | 92.2% | 70.6% |
| 1y4cA03 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.73 | 63.0 | 5.57e-01 | 96.1% | 88.5% |
| 4k7cA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.73 | 64.0 | 4.07e-01 | 98.7% | 31.0% |
| 1st6A04 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.72 | 61.0 | 5.35e-01 | 94.8% | 96.6% |
| 3eupB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.72 | 60.0 | 4.46e-01 | 93.5% | 61.0% |
| 4dvyP03 | 1.20.120.1270 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CagA exotoxin domain III | 0.71 | 62.0 | 4.76e-01 | 93.5% | 47.0% |
| 3gehA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.71 | 61.0 | 4.75e-01 | 94.8% | 75.4% |
| 1xzpA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.70 | 59.0 | 4.64e-01 | 93.5% | 70.5% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.70 | 55.0 | 4.49e-01 | 85.7% | 53.7% |
| 2l6hA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.70 | 58.0 | 4.69e-01 | 93.5% | 78.6% |
| 3d2eA06 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.70 | 55.0 | 4.86e-01 | 85.7% | 61.1% |
| 2l10A00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.69 | 56.0 | 4.53e-01 | 92.2% | 66.5% |
| 6fakA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.68 | 51.0 | 5.07e-01 | 80.5% | 77.8% |
| 1xwjA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.68 | 59.0 | 5.03e-01 | 100.0% | 93.1% |
| 4al0A00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.67 | 54.0 | 4.37e-01 | 87.0% | 49.3% |
| 3rguB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.67 | 54.0 | 5.23e-01 | 88.3% | 87.4% |
| 3iqtA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.67 | 57.0 | 4.97e-01 | 93.5% | 70.2% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.66 | 53.0 | 4.63e-01 | 88.3% | 76.3% |
| 6lumD01 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.65 | 49.0 | 4.21e-01 | 80.5% | 83.2% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.65 | 55.0 | 4.45e-01 | 94.8% | 74.2% |
| 4yjwA00 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.65 | 54.0 | 4.33e-01 | 92.2% | 89.5% |
| 1xwmA00 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.64 | 50.0 | 3.62e-01 | 83.1% | 35.4% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 50.0 | 5.08e-01 | 92.2% | 85.5% |
| 8etcb01 | 1.20.120.1190 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 53.0 | 4.43e-01 | 96.1% | 92.5% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.63 | 51.0 | 4.91e-01 | 88.3% | 86.2% |
| 2hfiA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.63 | 52.0 | 4.51e-01 | 92.2% | 91.1% |
| 1moqA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.63 | 51.0 | 3.69e-01 | 88.3% | 83.5% |
| 1a5tA03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.63 | 52.0 | 4.64e-01 | 94.8% | 84.5% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.62 | 48.0 | 4.56e-01 | 85.7% | 83.2% |
| 4yonA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.62 | 48.0 | 3.50e-01 | 84.4% | 42.6% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.61 | 49.0 | 4.16e-01 | 87.0% | 92.9% |
| 1gvnA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 49.0 | 4.71e-01 | 87.0% | 80.5% |
| 1vhnA02 | 1.10.1200.80 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2 | 0.60 | 49.0 | 5.12e-01 | 97.4% | 97.2% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.60 | 46.0 | 4.69e-01 | 88.3% | 84.2% |
| 1sxjB03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.59 | 48.0 | 4.58e-01 | 90.9% | 94.6% |
| 2wyhB04 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.59 | 46.0 | 4.28e-01 | 85.7% | 77.2% |
| 7k18A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.58 | 49.0 | 4.15e-01 | 94.8% | 85.1% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.58 | 45.0 | 4.43e-01 | 85.7% | 89.0% |
| 2lklA01 | 1.10.1900.40 | Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › Acidic terminal segments, variant surface antigen of PfEMP1 | 0.57 | 39.0 | 4.02e-01 | 100.0% | 77.8% |
| 1vljA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.57 | 44.0 | 3.34e-01 | 88.3% | 32.7% |
| 3h0dB02 | 1.10.1200.150 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Transcriptional repressor of class III stress genes, C-terminal domain | 0.57 | 46.0 | 4.57e-01 | 93.5% | 91.4% |
| 6l1kA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.56 | 44.0 | 3.37e-01 | 88.3% | 35.0% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.56 | 41.0 | 3.95e-01 | 87.0% | 67.8% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.55 | 48.0 | 3.85e-01 | 96.1% | 94.0% |
| 3bt5A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 46.0 | 3.70e-01 | 92.2% | 66.2% |
| 1f6fA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.55 | 46.0 | 3.57e-01 | 96.1% | 80.3% |
| 1sg7A00 | 1.10.1740.70 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB | 0.53 | 38.0 | 3.93e-01 | 77.9% | 96.0% |
| 4i8qA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 39.0 | 2.71e-01 | 87.0% | 63.2% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4091671 | 3684.1.1.1 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › DUF615 | 0.90 | 80.0 | 7.99e-01 | 100.0% | 92.4% |
| 4522200 | 3684.1.1.1 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › DUF615 | 0.90 | 80.0 | 7.75e-01 | 100.0% | 85.9% |
| 4662973 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.88 | 75.0 | 7.87e-01 | 94.8% | 100.0% |
| 4578321 | 3684.1.1.1 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › DUF615 | 0.87 | 81.0 | 8.01e-01 | 100.0% | 95.0% |
| 5060846 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.78 | 59.0 | 5.97e-01 | 89.6% | 81.3% |
| 4591251 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.77 | 62.0 | 5.99e-01 | 85.7% | 76.5% |
| 4679869 | 632.15.1.4 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › HSP70 | 0.77 | 62.0 | 5.98e-01 | 85.7% | 76.5% |
| 2492086 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.76 | 67.0 | 5.38e-01 | 96.1% | 80.3% |
| 3386454 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.76 | 68.0 | 6.20e-01 | 97.4% | 98.0% |
| 4927087 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.76 | 67.0 | 6.24e-01 | 96.1% | 97.9% |
| 3386453 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.75 | 65.0 | 5.87e-01 | 96.1% | 91.4% |
| 5028461 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.74 | 60.0 | 5.68e-01 | 85.7% | 74.4% |
| 3592841 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.74 | 58.0 | 6.08e-01 | 88.3% | 91.4% |
| 3991595 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.73 | 54.0 | 5.05e-01 | 77.9% | 72.6% |
| 3709588 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.73 | 59.0 | 5.82e-01 | 89.6% | 82.5% |
| 3973390 | 632.18.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 › DUF4398 | 0.73 | 59.0 | 6.15e-01 | 88.3% | 94.3% |
| 4105857 | 601.25.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain › MnmE_helical | 0.73 | 64.0 | 4.93e-01 | 94.8% | 78.8% |
| 3212799 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.73 | 59.0 | 5.76e-01 | 87.0% | 87.1% |
| 5060252 | 632.23.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Helical linker domain in nicking endonuclease N.BspD6I › Helical linker domain in nicking endonuclease N.BspD6I | 0.72 | 57.0 | 5.58e-01 | 88.3% | 77.6% |
| 4393454 | 632.15.1.6 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › DUF2678 | 0.72 | 60.0 | 5.45e-01 | 89.6% | 79.0% |
| 4176577 | 601.1.2.3 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › GCIP_C | 0.71 | 58.0 | 4.82e-01 | 87.0% | 60.0% |
| 3892515 | 632.22.1.173 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › DUF2678 | 0.71 | 58.0 | 5.34e-01 | 88.3% | 81.0% |
| 5054165 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 63.0 | 4.57e-01 | 100.0% | 60.5% |
| 4103507 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.71 | 59.0 | 5.46e-01 | 89.6% | 82.1% |
| 4220767 | 601.25.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain › MnmE_helical | 0.71 | 62.0 | 4.78e-01 | 96.1% | 77.0% |
| 4952876 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.70 | 57.0 | 5.46e-01 | 88.3% | 93.3% |
| 3279143 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.70 | 62.0 | 5.09e-01 | 98.7% | 99.3% |
| 3611066 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.70 | 56.0 | 5.88e-01 | 93.5% | 95.7% |
| 3989535 | 632.6.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit | 0.70 | 57.0 | 5.31e-01 | 88.3% | 75.8% |
| 4091420 | 5069.1.1.15 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm | 0.69 | 58.0 | 4.72e-01 | 93.5% | 73.8% |
| 4955309 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.68 | 56.0 | 5.53e-01 | 88.3% | 90.0% |
| 3568926 | 7515.1.1.6 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest | 0.68 | 60.0 | 3.81e-01 | 100.0% | 28.4% |
| 4362331 | 601.25.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain › MnmE_helical | 0.67 | 59.0 | 4.59e-01 | 98.7% | 97.6% |
| 5055497 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.67 | 56.0 | 4.58e-01 | 97.4% | 85.8% |
| 4100110 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.66 | 50.0 | 4.38e-01 | 80.5% | 91.3% |
| 3947493 | 601.3.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt | 0.66 | 56.0 | 4.98e-01 | 93.5% | 72.7% |
| 3253260 | 5069.1.3.4 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › CybS | 0.66 | 49.0 | 4.38e-01 | 79.2% | 77.1% |
| 3968542 | 601.3.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt | 0.66 | 57.0 | 4.99e-01 | 96.1% | 69.6% |
| 4473674 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 51.0 | 4.59e-01 | 85.7% | 87.3% |
| 3826910 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.65 | 55.0 | 4.35e-01 | 93.5% | 68.1% |
| 3793073 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.65 | 50.0 | 4.53e-01 | 85.7% | 63.6% |
| 4195415 | 3755.3.1.363 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › T1-F | 0.64 | 53.0 | 4.66e-01 | 96.1% | 70.4% |
| 4034270 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.64 | 49.0 | 4.91e-01 | 83.1% | 86.3% |
| 5053994 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.63 | 47.0 | 4.76e-01 | 85.7% | 84.0% |
| 4947163 | 601.30.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › MMR_HSR1 | 0.63 | 54.0 | 4.33e-01 | 97.4% | 81.2% |
| 4597634 | 632.19.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A | 0.61 | 47.0 | 4.66e-01 | 83.1% | 92.5% |
| 5046545 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 53.0 | 4.40e-01 | 98.7% | 55.7% |
| 3182665 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.60 | 48.0 | 4.53e-01 | 88.3% | 84.2% |
| 3393952 | 7515.1.1.6 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest | 0.60 | 52.0 | 3.40e-01 | 100.0% | 31.1% |
| 3814092 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.59 | 48.0 | 3.58e-01 | 93.5% | 67.3% |
| 5023033 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.59 | 49.0 | 4.38e-01 | 96.1% | 87.0% |
| 5013803 | 3843.1.1.4 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › PhaG_MnhG_YufB | 0.59 | 44.0 | 3.76e-01 | 80.5% | 64.0% |
| 4031559 | 3890.1.1.1 ↗ | alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Bax1-I | 0.58 | 51.0 | 3.73e-01 | 97.4% | 72.7% |
| 1180303 | 632.19.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › RICH | 0.57 | 44.0 | 4.37e-01 | 85.7% | 89.0% |
| 3835056 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.57 | 45.0 | 3.93e-01 | 85.7% | 55.9% |
| 4478129 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.56 | 40.0 | 3.89e-01 | 83.1% | 65.6% |
| 5046473 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.55 | 46.0 | 4.43e-01 | 97.4% | 90.0% |
| 4262050 | 4067.1.1.1 ↗ | alpha bundles › FdhE-like › FdhE-like › FdhE-like › FdhE | 0.55 | 43.0 | 3.61e-01 | 88.3% | 71.4% |
| 3980709 | 103.4.1.27 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TMP_2 | 0.54 | 44.0 | 3.65e-01 | 100.0% | 46.9% |