←Back to structures
CAKLQF020000018.1__CAH1088683.1__SAMEA5780031_02982__00024
Bact-VirCAKLQF020000018.1__CAH1088683.1__SAMEA5780031_02982__00024
Identity
- Kingdom:
- phage
Quality
83.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 63-83_278-412
Domain cluster:
rep: NC_048757.1__YP_009844891.1__HWC13_gp082__00082__D259-407
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03734.20 best | YkuD | 79.6 | 5.00e-22 | 84.6% | 97.3% |
D2
medium
residues 117-277
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01471.24 best | PG_binding_1 | 45.0 | 1.40e-11 | 31.7% | 82.5% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1eakA01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.80 | 32.0 | 5.26e-01 | 95.0% | 98.4% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4218606 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.83 | 43.0 | 6.05e-01 | 90.1% | 98.8% |
| 3299326 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.82 | 34.0 | 5.54e-01 | 88.2% | 100.0% |
| 3349612 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.81 | 27.0 | 5.00e-01 | 82.6% | 100.0% |
| 3395 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.79 | 40.0 | 5.71e-01 | 93.8% | 97.6% |
| 4492966 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 28.0 | 4.89e-01 | 83.9% | 96.4% |
| 3234671 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 27.0 | 4.73e-01 | 95.7% | 92.7% |
| 1498420 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.79 | 37.0 | 5.57e-01 | 92.5% | 98.7% |
| 3964920 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 29.0 | 4.90e-01 | 87.6% | 98.3% |
| 2644066 | 101.15.1.7 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM_RLK | 0.77 | 33.0 | 4.77e-01 | 98.8% | 85.5% |
| 4173379 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.77 | 38.0 | 5.40e-01 | 93.2% | 97.5% |
| 3903953 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 25.0 | 4.69e-01 | 95.0% | 100.0% |
| 3539881 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.75 | 34.0 | 5.00e-01 | 95.0% | 93.3% |
| 3324708 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 29.0 | 4.90e-01 | 94.4% | 100.0% |
| 3772398 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.74 | 34.0 | 4.85e-01 | 91.3% | 88.7% |
| 4321110 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.73 | 34.0 | 4.97e-01 | 98.8% | 96.0% |
| 3247155 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.73 | 31.0 | 4.82e-01 | 93.2% | 100.0% |
| 3319740 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.73 | 39.0 | 5.34e-01 | 96.9% | 100.0% |
| 3930763 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.72 | 34.0 | 5.12e-01 | 95.0% | 100.0% |
| 3711427 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.72 | 31.0 | 4.71e-01 | 91.9% | 95.7% |
| 3302194 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.71 | 40.0 | 5.21e-01 | 96.9% | 94.7% |
| 3221065 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.71 | 33.0 | 5.04e-01 | 93.8% | 100.0% |
| 3893524 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.71 | 31.0 | 4.90e-01 | 87.0% | 100.0% |
| 3933825 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.71 | 33.0 | 4.94e-01 | 95.0% | 98.7% |
| 4160453 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.70 | 31.0 | 4.84e-01 | 96.3% | 100.0% |
| 3537259 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.70 | 33.0 | 4.73e-01 | 94.4% | 92.5% |
| 3764906 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.70 | 32.0 | 4.54e-01 | 93.8% | 88.7% |
| 4857662 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.69 | 31.0 | 4.75e-01 | 98.1% | 98.6% |
| 3299934 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.69 | 40.0 | 4.98e-01 | 98.8% | 89.5% |
| 3772718 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.67 | 33.0 | 4.64e-01 | 98.1% | 92.9% |
| 3994858 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.66 | 33.0 | 4.78e-01 | 96.9% | 100.0% |
| 3332533 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.64 | 40.0 | 5.03e-01 | 98.1% | 100.0% |
| 3222017 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.64 | 35.0 | 4.63e-01 | 93.2% | 96.7% |
| 3698672 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.57 | 33.0 | 4.07e-01 | 91.9% | 87.6% |
| 4380775 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.54 | 41.0 | 3.79e-01 | 78.3% | 66.5% |
| 3274761 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.52 | 42.0 | 4.25e-01 | 95.0% | 81.8% |