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CAKLQF020000018.1__CAH1088849.1__SAMEA5780031_03028__00068
Bact-VirCAKLQF020000018.1__CAH1088849.1__SAMEA5780031_03028__00068
Identity
- Kingdom:
- phage
Quality
82.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-120
Domain cluster:
rep: CAKLQF020000018.1__CAH1088853.1__SAMEA5780031_03029__00069__D52-135
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25642.2 best | DUF7944 | 87.6 | 9.50e-25 | 90.1% | 98.8% |
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.70 | 49.0 | 4.49e-01 | 71.4% | 77.4% |
| 2hz8A00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.66 | 45.0 | 4.16e-01 | 70.3% | 93.0% |
| 4o6mA02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.65 | 45.0 | 3.55e-01 | 71.4% | 60.5% |
| 8sbeA02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.65 | 57.0 | 4.54e-01 | 97.8% | 93.0% |
| 3mvuA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.65 | 57.0 | 4.33e-01 | 100.0% | 62.9% |
| 1ailA00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.64 | 46.0 | 5.11e-01 | 79.1% | 97.1% |
| 3kp9A01 | 1.20.1440.130 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain | 0.64 | 52.0 | 4.29e-01 | 89.0% | 50.0% |
| 2kmfA01 | 1.20.58.810 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 | 0.62 | 43.0 | 4.22e-01 | 72.5% | 95.1% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 55.0 | 4.79e-01 | 100.0% | 90.3% |
| 4k0dA00 | 1.20.120.1730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.62 | 43.0 | 3.76e-01 | 72.5% | 78.3% |
| 3axjB01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.62 | 44.0 | 3.67e-01 | 73.6% | 49.7% |
| 3vnxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 55.0 | 4.25e-01 | 100.0% | 80.0% |
| 2qvaA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.59 | 42.0 | 3.76e-01 | 73.6% | 57.4% |
| 7tzoA01 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.58 | 43.0 | 3.51e-01 | 78.0% | 85.6% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 43.0 | 4.20e-01 | 76.9% | 79.4% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.58 | 41.0 | 3.73e-01 | 73.6% | 83.2% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.58 | 44.0 | 3.67e-01 | 80.2% | 64.3% |
| 2yinA03 | 1.20.58.740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C | 0.57 | 41.0 | 3.67e-01 | 74.7% | 67.2% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 40.0 | 3.86e-01 | 74.7% | 91.6% |
| 1un8A02 | 1.25.40.340 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain | 0.56 | 40.0 | 3.24e-01 | 75.8% | 96.9% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.56 | 46.0 | 4.85e-01 | 100.0% | 98.8% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 40.0 | 3.81e-01 | 78.0% | 67.9% |
| 2i10B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 42.0 | 3.81e-01 | 83.5% | 72.8% |
| 6a95A01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 39.0 | 3.53e-01 | 75.8% | 88.1% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 39.0 | 3.72e-01 | 78.0% | 69.6% |
| 5ceeA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 44.0 | 3.36e-01 | 93.4% | 87.5% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 36.0 | 3.73e-01 | 90.1% | 74.7% |
| 8e83B01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 45.0 | 2.99e-01 | 100.0% | 82.7% |
| 4etrB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 47.0 | 4.25e-01 | 100.0% | 91.8% |
| 3rf7A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.52 | 43.0 | 3.51e-01 | 91.2% | 87.2% |
| 1wizA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.52 | 38.0 | 4.05e-01 | 80.2% | 89.9% |
| 1n81A00 | 1.10.3030.10 | Mainly Alpha › Orthogonal Bundle › Gametocyte protein Pfg27 › Gametocyte protein Pfg27 | 0.51 | 45.0 | 3.60e-01 | 97.8% | 48.9% |
| 2odvA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 38.0 | 3.56e-01 | 78.0% | 79.5% |
| 4nleA02 | 1.10.275.60 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › | 0.51 | 42.0 | 3.73e-01 | 90.1% | 78.0% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 35.0 | 3.71e-01 | 89.0% | 79.3% |
| 3i2fA02 | 1.10.3020.10 | Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) | 0.51 | 35.0 | 3.52e-01 | 93.4% | 69.5% |
| 1wbeA01 | 1.10.3520.10 | Mainly Alpha › Orthogonal Bundle › Glycolipid transfer protein, GLTP › Glycolipid transfer protein | 0.51 | 40.0 | 3.22e-01 | 85.7% | 50.8% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.50 | 45.0 | 4.15e-01 | 96.7% | 79.8% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4972352 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.74 | 58.0 | 5.12e-01 | 83.5% | 82.3% |
| 3839570 | 601.51.1.3 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › FliS_cochap | 0.71 | 49.0 | 4.16e-01 | 71.4% | 60.7% |
| 5065276 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.71 | 58.0 | 4.00e-01 | 89.0% | 48.4% |
| 3649574 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.71 | 55.0 | 5.17e-01 | 82.4% | 68.8% |
| 3629841 | 5050.1.1.8 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › FPN1 | 0.70 | 60.0 | 4.38e-01 | 93.4% | 75.2% |
| 4441542 | 601.25.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain › MnmE_helical | 0.69 | 48.0 | 3.99e-01 | 72.5% | 76.9% |
| 5074552 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.68 | 50.0 | 4.66e-01 | 78.0% | 64.3% |
| 3291710 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.68 | 61.0 | 4.27e-01 | 100.0% | 67.9% |
| 3658090 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.67 | 53.0 | 4.74e-01 | 85.7% | 61.5% |
| 3462254 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.66 | 59.0 | 4.57e-01 | 100.0% | 70.0% |
| 5026210 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.64 | 53.0 | 4.13e-01 | 90.1% | 78.5% |
| 5063060 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.63 | 51.0 | 4.01e-01 | 87.9% | 59.5% |
| 3486435 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.63 | 56.0 | 3.95e-01 | 98.9% | 71.6% |
| 5065508 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.63 | 47.0 | 4.56e-01 | 78.0% | 72.0% |
| 3991595 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.63 | 46.0 | 4.58e-01 | 75.8% | 73.7% |
| 3715999 | 3817.1.1.1 ↗ | alpha bundles › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Pex19 | 0.63 | 38.0 | 3.69e-01 | 70.3% | 54.0% |
| 4955064 | 5086.1.1.233 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF973 | 0.63 | 44.0 | 3.31e-01 | 72.5% | 79.4% |
| 4979163 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.62 | 51.0 | 4.28e-01 | 89.0% | 61.3% |
| 3620303 | 101.1.1.66 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 | 0.61 | 44.0 | 4.89e-01 | 74.7% | 97.1% |
| 3391623 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.61 | 51.0 | 4.11e-01 | 95.6% | 86.3% |
| 3594585 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.61 | 43.0 | 2.75e-01 | 74.7% | 37.6% |
| 3737954 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.61 | 43.0 | 3.67e-01 | 74.7% | 71.3% |
| 5006393 | 7014.1.1.2 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE | 0.60 | 53.0 | 5.09e-01 | 98.9% | 92.4% |
| 3732116 | 5050.1.1.12 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › TRI12 | 0.60 | 52.0 | 3.99e-01 | 98.9% | 74.1% |
| 4637738 | 1075.1.1.27 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › PF27280 | 0.60 | 43.0 | 3.40e-01 | 75.8% | 59.5% |
| 3172417 | 603.1.1.6 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 | 0.59 | 42.0 | 3.55e-01 | 74.7% | 50.7% |
| 3289203 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.58 | 41.0 | 3.94e-01 | 74.7% | 90.9% |
| 3279029 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.58 | 49.0 | 3.92e-01 | 94.5% | 84.2% |
| 3590562 | 4002.1.1.5 ↗ | alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › ADH_Fe_C | 0.57 | 44.0 | 3.46e-01 | 83.5% | 51.2% |
| 5020905 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.57 | 43.0 | 3.90e-01 | 81.3% | 86.4% |
| 5006972 | 5045.1.1.3 ↗ | alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › V_ATPase_I | 0.57 | 44.0 | 3.20e-01 | 85.7% | 29.1% |
| 4003485 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 38.0 | 3.36e-01 | 74.7% | 46.7% |
| 4996751 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.56 | 43.0 | 4.17e-01 | 83.5% | 97.1% |
| 4928071 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.56 | 46.0 | 3.12e-01 | 87.9% | 51.3% |
| 4018806 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.56 | 38.0 | 3.76e-01 | 73.6% | 66.3% |
| 3448464 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.55 | 39.0 | 2.76e-01 | 73.6% | 69.3% |
| 5047089 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.55 | 45.0 | 4.27e-01 | 91.2% | 82.7% |
| 3647555 | 632.15.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › GAUT_1 | 0.54 | 42.0 | 3.97e-01 | 94.5% | 69.1% |
| 4432442 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.54 | 45.0 | 3.48e-01 | 87.9% | 93.0% |
| 3400531 | 197.1.1.1 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M | 0.53 | 43.0 | 3.98e-01 | 93.4% | 66.7% |
| 3369198 | 632.2.1.27 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › GAUT_1 | 0.53 | 41.0 | 3.89e-01 | 92.3% | 69.1% |
| 3654938 | 632.1.1.12 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › GAUT_1 | 0.52 | 41.0 | 3.93e-01 | 83.5% | 75.2% |
| 4874187 | 3051.1.1.1 ↗ | alpha arrays › Superantigen MAM C-terminal domain › Superantigen MAM C-terminal domain › Superantigen MAM C-terminal domain › MA-Mit | 0.52 | 41.0 | 3.73e-01 | 100.0% | 63.9% |
| 3377582 | 632.21.1.4 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Helical bundle domain in endo-beta-N-acetylglucosaminidase F2 › Helical bundle domain in endo-beta-N-acetylglucosaminidase F2 › GAUT_1 | 0.52 | 41.0 | 4.07e-01 | 84.6% | 86.3% |
| 3837826 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.51 | 48.0 | 3.79e-01 | 98.9% | 78.8% |
| 3605830 | 1189.1.1.1 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › Trypan_glycop | 0.51 | 43.0 | 2.94e-01 | 96.7% | 65.6% |
| 4009669 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.51 | 43.0 | 3.39e-01 | 97.8% | 45.4% |
| 3788414 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.51 | 37.0 | 3.76e-01 | 87.9% | 80.0% |
| 3286065 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.50 | 36.0 | 3.98e-01 | 95.6% | 98.6% |