←Back to structures
CAKLQF020000019.1__CAH1089660.1__SAMEA5780031_03048__00017
Bact-VirCAKLQF020000019.1__CAH1089660.1__SAMEA5780031_03048__00017
Identity
- Kingdom:
- phage
Quality
96.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-99
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18977.6 best | DUF5713 | 59.0 | 7.60e-16 | 100.0% | 86.0% |
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.71 | 56.0 | 5.18e-01 | 83.9% | 91.5% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.69 | 62.0 | 5.80e-01 | 100.0% | 82.3% |
| 2bduA02 | 1.10.150.340 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain | 0.69 | 46.0 | 5.00e-01 | 71.0% | 85.1% |
| 1xdpA01 | 1.20.58.310 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Polyphosphate kinase N-terminal domain | 0.66 | 49.0 | 4.75e-01 | 78.5% | 82.9% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.64 | 47.0 | 4.56e-01 | 83.9% | 69.8% |
| 1wteB01 | 1.10.3250.10 | Mainly Alpha › Orthogonal Bundle › type ii restriction endonuclease, domain 1 › type ii restriction endonuclease, domain 1 | 0.64 | 50.0 | 4.32e-01 | 84.9% | 74.8% |
| 7lb8B01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.63 | 51.0 | 3.56e-01 | 88.2% | 55.8% |
| 2b1eA04 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.63 | 54.0 | 4.86e-01 | 94.6% | 96.1% |
| 3jsbA01 | 1.20.1440.300 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain | 0.61 | 39.0 | 4.15e-01 | 100.0% | 74.1% |
| 5f42A02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.60 | 42.0 | 4.51e-01 | 88.2% | 82.9% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.60 | 42.0 | 3.94e-01 | 73.1% | 73.5% |
| 1ya0A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 47.0 | 3.71e-01 | 87.1% | 52.4% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.59 | 48.0 | 3.86e-01 | 89.2% | 61.0% |
| 1uz3B00 | 1.10.1240.40 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › ENT domain | 0.59 | 45.0 | 4.52e-01 | 93.5% | 81.4% |
| 3kkbA00 | 1.20.120.880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain | 0.59 | 44.0 | 4.09e-01 | 82.8% | 61.9% |
| 4nx9A01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.58 | 48.0 | 4.05e-01 | 89.2% | 69.0% |
| 4d8mA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.58 | 45.0 | 3.57e-01 | 88.2% | 59.7% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.57 | 41.0 | 4.28e-01 | 87.1% | 83.7% |
| 5nl6B01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 43.0 | 3.98e-01 | 82.8% | 85.1% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 43.0 | 4.23e-01 | 100.0% | 77.5% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 41.0 | 4.13e-01 | 77.4% | 95.7% |
| 4w8pA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 44.0 | 4.01e-01 | 88.2% | 81.5% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 44.0 | 3.82e-01 | 88.2% | 90.6% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 44.0 | 3.99e-01 | 89.2% | 77.6% |
| 2odvA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 41.0 | 3.91e-01 | 80.6% | 87.5% |
| 5u56A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 44.0 | 4.25e-01 | 91.4% | 97.3% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 43.0 | 4.53e-01 | 83.9% | 97.5% |
| 1u8bA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 31.0 | 3.72e-01 | 75.3% | 86.9% |
| 1yhuB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 47.0 | 4.16e-01 | 100.0% | 68.8% |
| 7tzoA01 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.54 | 42.0 | 3.44e-01 | 83.9% | 48.3% |
| 5xtck00 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 38.0 | 3.83e-01 | 86.0% | 72.2% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 44.0 | 4.00e-01 | 89.2% | 82.0% |
| 8ai9B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 44.0 | 4.32e-01 | 95.7% | 88.5% |
| 2gnxA01 | 1.10.3450.30 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › | 0.52 | 46.0 | 3.77e-01 | 98.9% | 92.7% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 38.0 | 4.02e-01 | 89.2% | 88.9% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 40.0 | 3.88e-01 | 84.9% | 90.0% |
| 3vhlA02 | 1.20.58.740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C | 0.50 | 41.0 | 3.82e-01 | 91.4% | 89.2% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3233936 | 627.1.1.2 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › DUF5601 | 0.75 | 63.0 | 6.33e-01 | 93.5% | 90.5% |
| 5031241 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.72 | 54.0 | 5.72e-01 | 88.2% | 91.3% |
| 3829906 | 2484.1.1.198 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 | 0.69 | 54.0 | 3.83e-01 | 82.8% | 68.0% |
| 3706550 | 109.4.1.72 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C | 0.69 | 48.0 | 3.83e-01 | 89.2% | 36.2% |
| 3917324 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.67 | 54.0 | 4.78e-01 | 88.2% | 95.7% |
| 5031891 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.66 | 50.0 | 4.81e-01 | 90.3% | 70.4% |
| 5024540 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.65 | 50.0 | 4.31e-01 | 90.3% | 52.4% |
| 3638308 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 52.0 | 4.20e-01 | 91.4% | 51.1% |
| 4954587 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.63 | 51.0 | 4.31e-01 | 90.3% | 77.6% |
| 3843 | 604.14.1.1 ↗ | alpha bundles › Spectrin repeat-like › PPK N-terminal domain-like › PPK N-terminal domain-like › PP_kinase_N | 0.63 | 49.0 | 4.92e-01 | 83.9% | 86.2% |
| 3743047 | 604.5.1.28 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TBCC_N | 0.63 | 48.0 | 5.03e-01 | 83.9% | 98.8% |
| 3320550 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 52.0 | 4.08e-01 | 91.4% | 46.8% |
| 5070237 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.62 | 51.0 | 5.26e-01 | 92.5% | 92.2% |
| 3980912 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.62 | 48.0 | 4.49e-01 | 82.8% | 67.8% |
| 3476594 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.62 | 49.0 | 4.70e-01 | 86.0% | 85.5% |
| 3223024 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.61 | 46.0 | 4.05e-01 | 80.6% | 86.7% |
| 3927597 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.61 | 47.0 | 4.39e-01 | 84.9% | 87.5% |
| 2756826 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.61 | 48.0 | 4.48e-01 | 84.9% | 84.3% |
| 3516162 | 603.1.1.23 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Sec20 | 0.60 | 49.0 | 4.06e-01 | 89.2% | 71.8% |
| 1769448 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.60 | 42.0 | 3.85e-01 | 73.1% | 68.3% |
| 3732909 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.60 | 45.0 | 4.75e-01 | 80.6% | 100.0% |
| 3220072 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.60 | 48.0 | 4.51e-01 | 86.0% | 82.6% |
| 3215185 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.60 | 47.0 | 4.09e-01 | 84.9% | 82.6% |
| 3312910 | 603.1.1.111 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TBCC_N | 0.60 | 46.0 | 4.70e-01 | 84.9% | 86.7% |
| 3313934 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.60 | 49.0 | 4.92e-01 | 90.3% | 92.6% |
| 3638386 | 603.1.1.111 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TBCC_N | 0.60 | 46.0 | 4.44e-01 | 83.9% | 79.0% |
| 4003115 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 47.0 | 3.17e-01 | 91.4% | 21.6% |
| 3405261 | 604.22.1.1 ↗ | alpha bundles › Spectrin repeat-like › tubulin binding cofactor C N-terminal domain › tubulin binding cofactor C N-terminal domain › TBCC_N | 0.59 | 46.0 | 4.29e-01 | 86.0% | 65.8% |
| 4973584 | 604.3.1.51 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › 8xMP | 0.59 | 47.0 | 4.86e-01 | 89.2% | 92.0% |
| 3271959 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.59 | 46.0 | 4.59e-01 | 84.9% | 88.4% |
| 3815026 | 604.1.1.148 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TBCC_N | 0.58 | 45.0 | 4.70e-01 | 84.9% | 94.1% |
| 3261432 | 603.1.1.17 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE | 0.58 | 46.0 | 3.60e-01 | 88.2% | 80.9% |
| 4024116 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.58 | 43.0 | 3.44e-01 | 79.6% | 84.6% |
| 3799931 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.57 | 45.0 | 4.34e-01 | 84.9% | 82.9% |
| 3251611 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.57 | 45.0 | 3.50e-01 | 87.1% | 88.2% |
| 3580283 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.57 | 45.0 | 4.74e-01 | 88.2% | 91.8% |
| 3943720 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 43.0 | 3.86e-01 | 90.3% | 55.0% |
| 3870690 | 109.4.1.1647 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28330 | 0.57 | 45.0 | 4.15e-01 | 90.3% | 64.8% |
| 375971 | 633.21.1.1 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › DUF326 | 0.57 | 44.0 | 4.29e-01 | 100.0% | 75.2% |
| 3272586 | 109.4.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 | 0.56 | 45.0 | 2.82e-01 | 87.1% | 17.4% |
| 3177042 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.56 | 45.0 | 4.26e-01 | 89.2% | 73.6% |
| 4972154 | 604.12.1.135 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Oxidored_q2 | 0.56 | 43.0 | 4.29e-01 | 84.9% | 80.0% |
| 3626530 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 44.0 | 4.39e-01 | 86.0% | 89.5% |
| 3934925 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.56 | 43.0 | 4.58e-01 | 84.9% | 95.0% |
| 3457190 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.55 | 48.0 | 4.23e-01 | 100.0% | 75.9% |
| 3381774 | 4954.1.1.0 ↗ | a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit | 0.55 | 45.0 | 3.74e-01 | 91.4% | 60.0% |
| 4069906 | 604.12.1.108 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › CRPA | 0.55 | 44.0 | 4.08e-01 | 88.2% | 70.0% |
| 3243299 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.55 | 38.0 | 4.15e-01 | 77.4% | 97.1% |
| 5045256 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.54 | 42.0 | 4.23e-01 | 86.0% | 86.3% |
| 3668287 | 601.2.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr | 0.54 | 41.0 | 3.93e-01 | 83.9% | 79.1% |
| 3718534 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 41.0 | 2.90e-01 | 89.2% | 24.0% |
| 4957532 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.53 | 45.0 | 4.05e-01 | 93.5% | 76.9% |
| 3244235 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.53 | 46.0 | 4.52e-01 | 100.0% | 96.0% |
| 3736725 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 46.0 | 3.53e-01 | 100.0% | 93.5% |
| 3174089 | 109.4.1.435 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RICTOR_N | 0.52 | 40.0 | 3.12e-01 | 87.1% | 36.2% |
| 3067227 | 109.1.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_3 | 0.52 | 44.0 | 4.24e-01 | 94.6% | 84.8% |
| 1282201 | 109.1.1.14 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › MglA_C | 0.52 | 45.0 | 4.23e-01 | 100.0% | 89.0% |