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CAKLQF020000020.1__CAH1090501.1__SAMEA5780031_03159__00051
Bact-VirCAKLQF020000020.1__CAH1090501.1__SAMEA5780031_03159__00051
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 236-283
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d8mA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.68 | 57.0 | 4.01e-01 | 100.0% | 79.4% |
| 3weoA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.65 | 52.0 | 4.30e-01 | 100.0% | 54.5% |
| 3ffjA04 | 2.60.40.4040 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 54.0 | 4.09e-01 | 100.0% | 64.6% |
| 1l9mA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 51.0 | 4.29e-01 | 97.9% | 85.6% |
| 4e8dA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 50.0 | 3.58e-01 | 100.0% | 54.2% |
| 4dk0A02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.63 | 53.0 | 4.42e-01 | 100.0% | 91.1% |
| 5f7uA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.63 | 52.0 | 4.61e-01 | 100.0% | 68.4% |
| 1k3iA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 51.0 | 3.75e-01 | 100.0% | 48.7% |
| 2enpA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.63 | 50.0 | 3.77e-01 | 100.0% | 59.9% |
| 2a74A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 49.0 | 4.13e-01 | 100.0% | 71.6% |
| 3ottB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 50.0 | 3.89e-01 | 100.0% | 73.4% |
| 2f2hA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 47.0 | 4.77e-01 | 93.8% | 100.0% |
| 4wtxA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 48.0 | 4.05e-01 | 100.0% | 74.2% |
| 5vqfD01 | 2.60.120.970 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 48.0 | 3.26e-01 | 100.0% | 39.4% |
| 6l4cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 47.0 | 3.37e-01 | 100.0% | 40.8% |
| 8afoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 47.0 | 4.10e-01 | 100.0% | 78.4% |
| 6v55A01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.59 | 48.0 | 3.85e-01 | 100.0% | 86.6% |
| 3h8uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 48.0 | 3.70e-01 | 100.0% | 41.0% |
| 5f7cA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 45.0 | 4.51e-01 | 95.8% | 100.0% |
| 1wktA00 | 2.60.20.20 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › | 0.58 | 46.0 | 4.00e-01 | 100.0% | 93.2% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 44.0 | 4.02e-01 | 89.6% | 77.9% |
| 3ztdF01 | 2.60.40.780 | Mainly Beta › Sandwich › Immunoglobulin-like › von Hippel-Lindau disease tumour suppressor, beta domain | 0.57 | 43.0 | 3.74e-01 | 93.8% | 53.3% |
| 4brvA00 | 2.60.40.730 | Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain | 0.56 | 43.0 | 3.48e-01 | 100.0% | 66.1% |
| 2i45D00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 44.0 | 3.74e-01 | 100.0% | 68.7% |
| 5eqjB01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.56 | 41.0 | 3.73e-01 | 85.4% | 81.7% |
| 3cjxA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 43.0 | 3.26e-01 | 100.0% | 46.7% |
| 3wdhA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 44.0 | 3.87e-01 | 100.0% | 57.1% |
| 1cfbA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 3.61e-01 | 100.0% | 72.7% |
| 3rpiB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 3.61e-01 | 100.0% | 83.7% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 41.0 | 3.63e-01 | 100.0% | 91.2% |
| 5t89Y06 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.60e-01 | 100.0% | 84.8% |
| 1wgyA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 42.0 | 3.80e-01 | 100.0% | 93.4% |
| 4f7kA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.53 | 40.0 | 3.11e-01 | 93.8% | 78.3% |
| 1wjnA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 41.0 | 3.49e-01 | 100.0% | 78.4% |
| 2sliA03 | 2.40.220.10 | Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 | 0.52 | 38.0 | 3.04e-01 | 79.2% | 87.0% |
| 1f97A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.27e-01 | 93.8% | 87.3% |
| 4dmiA02 | 2.60.120.1010 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 39.0 | 3.10e-01 | 100.0% | 71.5% |
| 2dn8A01 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 36.0 | 3.30e-01 | 81.2% | 56.9% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 40.0 | 2.68e-01 | 100.0% | 65.9% |
| 3tm8B00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.50 | 39.0 | 2.52e-01 | 100.0% | 17.3% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3981534 | 375.1.1.197 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF1451 | 0.72 | 57.0 | 5.86e-01 | 97.9% | 95.6% |
| 3994700 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.69 | 57.0 | 4.84e-01 | 100.0% | 62.5% |
| 4256871 | 10.32.1.18 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C | 0.68 | 56.0 | 3.92e-01 | 100.0% | 91.6% |
| 4565791 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.66 | 57.0 | 4.66e-01 | 100.0% | 90.0% |
| 4932061 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.64 | 44.0 | 4.57e-01 | 91.7% | 80.0% |
| 5002695 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.63 | 51.0 | 4.56e-01 | 100.0% | 81.3% |
| 2096154 | 12.1.1.50 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_31_3rd | 0.63 | 51.0 | 4.45e-01 | 100.0% | 65.5% |
| 4403433 | 11.1.1.11 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Usher | 0.63 | 48.0 | 4.46e-01 | 93.8% | 71.4% |
| 4381190 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.62 | 52.0 | 4.17e-01 | 100.0% | 83.8% |
| 3501346 | 10.32.1.221 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25900 | 0.62 | 49.0 | 3.60e-01 | 100.0% | 65.0% |
| 3820294 | 11.1.4.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 | 0.61 | 49.0 | 3.75e-01 | 95.8% | 45.4% |
| 3858828 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 49.0 | 4.27e-01 | 100.0% | 77.6% |
| 3642588 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.59 | 46.0 | 3.77e-01 | 93.8% | 46.7% |
| 3879356 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 48.0 | 4.25e-01 | 100.0% | 74.7% |
| 2641716 | 11.1.4.24 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarbopepD_reg_2 | 0.58 | 43.0 | 3.73e-01 | 91.7% | 53.8% |
| 4545546 | 11.1.1.21 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Tissue_fac | 0.56 | 44.0 | 3.79e-01 | 100.0% | 74.7% |
| 5053095 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 43.0 | 3.51e-01 | 100.0% | 74.8% |
| 3212270 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.54 | 42.0 | 3.40e-01 | 100.0% | 40.8% |
| 3206860 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.54 | 43.0 | 3.55e-01 | 100.0% | 69.2% |
| 4233293 | 268.2.1.1 ↗ | a+b two layers › Sterol carrier protein-like › LytR-Cps2A-Psr (LCP) enzymes › LytR-Cps2A-Psr (LCP) enzymes › LytR_cpsA_psr | 0.54 | 42.0 | 2.71e-01 | 95.8% | 17.9% |
| 3923675 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.51 | 40.0 | 3.73e-01 | 93.8% | 81.5% |
| 1211 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.51 | 40.0 | 2.68e-01 | 100.0% | 65.9% |
| 3992773 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 39.0 | 3.84e-01 | 93.8% | 92.7% |
D2
medium
residues 1-200
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08887.17 best | GAD-like | 97.0 | 8.60e-28 | 53.0% | 87.8% |
| PF08906.17 | T6SS_Tdi1_C | 69.9 | 1.90e-19 | 37.5% | 93.3% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2arzA02 | 3.20.180.10 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like | 0.66 | 30.0 | 4.43e-01 | 94.5% | 97.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2462317 | 4205.1.1.2 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › GAD-like,T6SS_Tdi1_C | 0.90 | 87.0 | 8.36e-01 | 100.0% | 90.0% |
| 4596164 | 4205.1.1.8 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › DUF2625 | 0.71 | 66.0 | 6.61e-01 | 98.5% | 100.0% |
| 4839749 | 3821.1.1.0 ↗ | a+b complex topology › CRISPR-associated endonuclease Cas9 beta-hairpin domain › CRISPR-associated endonuclease Cas9 beta-hairpin domain › CRISPR-associated endonuclease Cas9 beta-hairpin domain | 0.68 | 16.0 | 3.36e-01 | 90.5% | 84.4% |
| 3300008 | 4205.1.1.3 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SMI1_KNR4 | 0.67 | 52.0 | 5.09e-01 | 80.0% | 92.7% |
| 3284638 | 4205.1.1.3 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SMI1_KNR4 | 0.65 | 46.0 | 5.35e-01 | 75.5% | 100.0% |
| 4986017 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 21.0 | 3.30e-01 | 71.5% | 84.3% |
| 3587782 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.56 | 25.0 | 3.34e-01 | 91.5% | 74.5% |
| 3844573 | 5.1.3.170 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_IFT140_2nd | 0.52 | 37.0 | 3.06e-01 | 72.0% | 84.6% |