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CAKLQF020000021.1__CAH1090643.1__SAMEA5780031_03219__00041

Bact-Vir

CAKLQF020000021.1__CAH1090643.1__SAMEA5780031_03219__00041

Identity

Kingdom:
phage

Quality

95.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-84
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08666.18 best SAF 24.3 5.20e-05 89.9% 93.7%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lazA01 2.30.130.110 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › 0.97 93.0 9.33e-01 100.0% 98.7%
3k3sH01 2.30.130.110 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › 0.94 90.0 8.93e-01 100.0% 96.3%
3frnA02 3.90.1210.10 Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain 0.59 45.0 4.92e-01 81.0% 95.6%
3g8rA02 3.90.1210.10 Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain 0.59 45.0 4.52e-01 81.0% 79.0%
1wvoA00 3.90.1210.10 Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain 0.58 43.0 4.40e-01 82.3% 78.5%
2wqpA02 3.90.1210.10 Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain 0.57 45.0 4.68e-01 82.3% 89.0%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 34.0 3.64e-01 91.1% 75.8%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 34.0 3.22e-01 91.1% 56.2%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4123066 70.3.1.12 beta barrels › beta-clip › SET domain-like › SET domain-like › PF30644 0.98 94.0 9.39e-01 100.0% 97.5%
1295900 70.3.1.12 beta barrels › beta-clip › SET domain-like › SET domain-like › PF30644 0.97 93.0 8.63e-01 100.0% 83.0%
4996605 70.3.1.12 beta barrels › beta-clip › SET domain-like › SET domain-like › PF30644 0.95 89.0 8.92e-01 97.5% 96.2%
3980990 70.3.1.12 beta barrels › beta-clip › SET domain-like › SET domain-like › PF30644 0.93 89.0 8.69e-01 100.0% 97.6%
5024532 70.3.1.12 beta barrels › beta-clip › SET domain-like › SET domain-like › PF30644 0.93 88.0 8.58e-01 98.7% 98.8%
4144942 70.3.1.12 beta barrels › beta-clip › SET domain-like › SET domain-like › PF30644 0.92 86.0 8.42e-01 98.7% 100.0%
4268048 70.3.1.3 beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.59 45.0 4.93e-01 79.7% 95.4%
3962108 70.3.1.3 beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.58 45.0 4.74e-01 81.0% 94.3%
3182804 70.3.1.11 beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND 0.57 51.0 3.38e-01 94.9% 89.3%
3909202 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 33.0 3.52e-01 89.9% 64.3%
4046971 70.3.1.3 beta barrels › beta-clip › SET domain-like › SET domain-like › SAF 0.57 44.0 4.81e-01 81.0% 98.5%
4602101 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.52 32.0 3.54e-01 88.6% 76.9%
D2 high residues 115-263
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04295.19 best GD_AH_second 120.7 7.00e-35 99.3% 99.3%
CATH (86)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2q5cA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 45.0 5.48e-01 100.0% 100.0%
5e3iA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.70 46.0 5.53e-01 93.3% 100.0%
3nbmA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 47.0 5.47e-01 90.6% 100.0%
2zskA01 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 51.0 5.64e-01 100.0% 100.0%
4p1zA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 52.0 5.53e-01 93.3% 93.7%
3ojcA01 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 51.0 5.62e-01 90.6% 100.0%
1evlA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.67 46.0 5.24e-01 100.0% 93.8%
1dpgA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 49.0 4.61e-01 75.8% 84.0%
1sulB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 57.0 5.18e-01 92.6% 90.3%
5y58A01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.66 54.0 4.72e-01 87.2% 100.0%
3s99A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 51.0 5.30e-01 90.6% 89.0%
4c5cA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 38.0 4.84e-01 78.5% 100.0%
3flkA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.65 57.0 4.26e-01 93.3% 86.4%
3g85A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 52.0 5.29e-01 92.6% 86.7%
4hwtA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.65 45.0 5.18e-01 100.0% 96.4%
1cnzA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.65 57.0 4.25e-01 94.0% 86.2%
3h5tA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 50.0 5.26e-01 91.3% 91.7%
4pevA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 50.0 5.25e-01 91.3% 93.1%
4wzzA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 50.0 4.85e-01 93.3% 75.3%
4joqA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 51.0 5.22e-01 94.0% 88.7%
4rkrB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 47.0 5.03e-01 91.3% 89.2%
7kdyB01 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.63 52.0 5.25e-01 89.9% 86.2%
2b4aA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 47.0 5.23e-01 100.0% 100.0%
3brsA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 50.0 5.23e-01 98.7% 92.0%
3qi7A01 3.40.50.11400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 56.0 5.70e-01 100.0% 98.6%
2qtlA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.62 45.0 4.49e-01 74.5% 100.0%
1tjyA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 49.0 4.80e-01 98.0% 76.1%
6ln3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 54.0 4.87e-01 94.0% 100.0%
1dbrC00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 47.0 4.16e-01 79.2% 57.2%
3wl5A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 54.0 4.17e-01 96.0% 90.2%
2iueA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.62 53.0 4.75e-01 93.3% 99.1%
4dqlA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.62 45.0 4.41e-01 75.2% 95.0%
3u7iA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.62 53.0 4.72e-01 95.3% 98.2%
5awhA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 53.0 4.99e-01 93.3% 83.2%
1jx6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 51.0 4.81e-01 91.3% 73.1%
3ty4B00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.61 56.0 4.23e-01 100.0% 88.5%
1shuX00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.61 52.0 4.92e-01 93.3% 97.8%
5hvmA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.61 54.0 4.81e-01 96.0% 84.1%
5jioA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.60 53.0 4.77e-01 96.0% 85.6%
3fzvD02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 38.0 4.33e-01 89.9% 85.3%
1xrsB02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.60 52.0 5.11e-01 94.0% 88.7%
5dxfA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.60 53.0 4.74e-01 96.0% 83.1%
5g5tA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 48.0 4.71e-01 98.7% 80.1%
3a1fA00 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.59 43.0 4.17e-01 73.8% 90.2%
7xlqD02 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.59 51.0 4.69e-01 92.6% 97.9%
4ttrA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 51.0 4.65e-01 94.0% 99.0%
4b4dA02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.59 43.0 4.19e-01 75.2% 91.4%
3rofA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 51.0 5.07e-01 94.6% 97.5%
1xo1A02 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.58 39.0 3.83e-01 100.0% 62.9%
3hv2A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 47.0 4.89e-01 94.0% 94.1%
2f4nA01 3.40.50.10790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal 0.58 49.0 4.93e-01 99.3% 91.9%
4ccsA01 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 40.0 4.61e-01 92.6% 100.0%
6wctD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 48.0 4.90e-01 94.0% 89.8%
1b0zA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 51.0 4.46e-01 97.3% 93.4%
4pyrA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 52.0 4.92e-01 100.0% 82.6%
3qkiB01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 51.0 3.82e-01 98.0% 94.5%
7mjzA01 3.40.50.12160 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylthiotransferase, N-terminal domain 0.57 43.0 4.61e-01 90.6% 95.9%
3cf4A02 3.40.50.2030 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 50.0 4.55e-01 94.6% 82.1%
2js7A01 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.57 48.0 5.01e-01 90.6% 100.0%
2bwjA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 51.0 4.63e-01 97.3% 100.0%
2xciA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 50.0 4.66e-01 96.0% 84.5%
1t1jA00 3.40.50.10400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein PA1492 0.56 42.0 4.65e-01 96.6% 99.2%
3g13B00 3.40.50.1390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Resolvase, N-terminal catalytic domain 0.56 42.0 4.40e-01 93.3% 85.5%
8cuyA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.56 47.0 3.44e-01 92.6% 99.8%
3lv8A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 49.0 4.45e-01 98.7% 100.0%
3lgdA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.55 46.0 3.28e-01 91.3% 79.7%
3vxbA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 43.0 3.96e-01 82.6% 82.9%
2eg4A01 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.55 36.0 3.94e-01 96.0% 82.2%
1zghA01 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.55 47.0 4.55e-01 91.9% 90.9%
1sbpA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 44.0 4.40e-01 88.6% 83.4%
4tl8F00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 42.0 3.78e-01 83.2% 90.1%
3bs4A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 43.0 3.69e-01 86.6% 78.4%
7fg9A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 47.0 4.63e-01 96.0% 89.5%
1yp1A00 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.53 45.0 4.14e-01 93.3% 92.5%
1b0zA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.53 46.0 4.30e-01 95.3% 80.4%
4n13A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 39.0 4.35e-01 92.6% 100.0%
3c6cA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 44.0 3.55e-01 91.3% 98.0%
2fm7A00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.52 24.0 3.41e-01 75.8% 100.0%
5iaiA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 41.0 3.78e-01 83.2% 80.2%
3lw6A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.52 38.0 3.29e-01 77.2% 71.4%
4ecfA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 38.0 3.96e-01 82.6% 82.6%
2qytA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 45.0 4.22e-01 96.6% 95.2%
5ci5A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 42.0 3.98e-01 90.6% 87.5%
4do7A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.51 41.0 3.42e-01 89.3% 97.9%
4dddA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 44.0 4.35e-01 96.0% 93.2%
3n5lA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 41.0 4.32e-01 89.3% 97.8%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3942137 2007.1.20.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Dehydratase-like › GD_AH_second 0.99 92.0 9.41e-01 94.6% 97.2%
3981639 2007.1.14.30 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › GD_AH_second 0.99 97.0 9.59e-01 100.0% 96.1%
4010009 2003.1.1.89 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GD_AH_second 0.89 79.0 8.19e-01 100.0% 97.9%
3513731 2007.1.20.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Dehydratase-like › GD_AH_second 0.89 79.0 8.19e-01 100.0% 97.9%
3947738 2007.1.13.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › GD_AH_second 0.89 79.0 8.15e-01 100.0% 97.9%
3386936 2007.1.2.45 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › GD_AH_second 0.85 68.0 7.47e-01 95.3% 99.2%
3210066 7579.1.1.51 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF676 0.72 63.0 4.68e-01 94.6% 94.6%
3633478 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.71 63.0 4.99e-01 94.6% 96.6%
3541218 2004.1.1.589 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › URGCP, URGCP_GTPase 0.70 61.0 3.89e-01 94.0% 33.0%
3282907 7579.1.1.44 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 0.70 59.0 4.93e-01 89.9% 98.4%
4643881 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.69 45.0 4.69e-01 94.0% 70.7%
None 0.67 55.0 4.30e-01 86.6% 89.1%
3205681 4303.1.1.1 alpha arrays › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › ILVD_EDD 0.67 61.0 4.41e-01 100.0% 65.8%
3244232 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 61.0 5.44e-01 100.0% 95.2%
3692091 4303.1.1.1 alpha arrays › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › ILVD_EDD 0.66 61.0 4.49e-01 100.0% 64.7%
3400494 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.66 57.0 4.73e-01 93.3% 66.9%
3195172 4303.1.1.1 alpha arrays › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › ILVD_EDD 0.66 60.0 4.41e-01 100.0% 62.0%
3225301 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.66 57.0 5.02e-01 92.6% 76.7%
4886012 2007.1.20.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Dehydratase-like › ILVD_EDD 0.66 60.0 4.32e-01 100.0% 58.6%
4957948 2007.2.1.3 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › FMN_red 0.66 56.0 4.70e-01 92.6% 71.4%
3193526 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.65 59.0 4.64e-01 98.7% 93.7%
3971443 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.65 52.0 4.59e-01 91.3% 58.1%
3976932 4303.1.1.1 alpha arrays › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › ILVD_EDD 0.65 60.0 4.44e-01 100.0% 62.1%
3974707 4303.1.1.0 alpha arrays › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like 0.65 60.0 4.34e-01 100.0% 58.8%
3475840 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.65 56.0 4.54e-01 94.0% 71.0%
4934862 2007.1.20.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Dehydratase-like › ILVD_EDD 0.65 59.0 4.43e-01 100.0% 64.8%
4399711 4303.1.1.1 alpha arrays › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › ILVD_EDD 0.65 60.0 4.26e-01 100.0% 59.3%
3225505 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.65 57.0 5.17e-01 94.0% 88.2%
4945636 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.65 55.0 5.03e-01 92.6% 98.0%
3401021 2007.9.1.0 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain 0.64 56.0 5.56e-01 94.6% 96.8%
5064752 4303.1.1.1 alpha arrays › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › ILVD_EDD 0.64 58.0 4.32e-01 100.0% 65.1%
5036878 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.63 44.0 4.99e-01 95.3% 95.4%
4599955 4303.1.1.0 alpha arrays › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like 0.63 59.0 4.34e-01 100.0% 64.3%
3249751 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.63 55.0 4.50e-01 93.3% 78.1%
3191387 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.63 58.0 4.47e-01 99.3% 99.4%
3221914 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.63 57.0 5.03e-01 100.0% 76.8%
4176536 4303.1.1.1 alpha arrays › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › lvD/EDD N-terminal domain-like › ILVD_EDD 0.62 57.0 4.22e-01 100.0% 62.9%
4945260 2006.1.2.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.62 50.0 4.07e-01 86.6% 51.4%
3222021 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.62 54.0 4.57e-01 93.3% 70.2%
4999346 2007.1.5.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › Asp_Glu_race 0.62 45.0 4.95e-01 77.9% 95.7%
2773587 7579.1.1.4 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9,BD-FAE 0.62 54.0 4.58e-01 94.6% 94.0%
4885999 2487.1.1.4 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › ILVD_EDD 0.62 56.0 4.24e-01 100.0% 64.1%
4367162 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.62 57.0 5.21e-01 100.0% 79.5%
3375451 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.62 55.0 4.64e-01 96.6% 73.2%
4961516 2007.1.5.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › Asp_Glu_race 0.62 45.0 4.82e-01 83.9% 88.8%
3199938 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.62 44.0 4.06e-01 72.5% 82.7%
3983363 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.61 56.0 5.04e-01 100.0% 91.7%
5076870 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.61 55.0 5.17e-01 96.6% 86.1%
4237305 2007.1.2.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Bmp 0.61 52.0 4.00e-01 91.3% 73.1%
4957739 2007.1.5.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › Asp_Glu_race 0.61 44.0 4.91e-01 77.9% 96.5%
2617273 2007.1.20.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Dehydratase-like › ILVD_EDD 0.61 49.0 4.78e-01 83.2% 96.9%
3275946 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.61 45.0 4.38e-01 75.2% 97.5%
4391132 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.61 56.0 4.95e-01 100.0% 75.8%
4026015 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.61 44.0 4.39e-01 75.2% 95.0%
5019444 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.61 49.0 4.02e-01 86.6% 52.9%
3602914 2007.2.1.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.60 53.0 5.31e-01 94.6% 100.0%
4984198 2011.1.1.38 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › DUF2119 0.60 55.0 5.00e-01 100.0% 82.3%
5027226 7576.1.1.0 a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain 0.60 50.0 4.51e-01 90.6% 93.3%
4493613 2007.2.1.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_2 0.60 50.0 4.55e-01 92.6% 100.0%
4179809 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.60 54.0 5.46e-01 99.3% 99.3%
3629002 2011.1.1.0 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases 0.59 51.0 4.72e-01 94.6% 92.3%
3941002 2003.1.5.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.58 48.0 3.42e-01 87.2% 40.2%
4040940 2007.1.2.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Bmp 0.58 49.0 4.44e-01 91.9% 67.0%
4142129 2004.1.1.214 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CSM2 0.58 44.0 3.92e-01 78.5% 65.7%
3960263 2007.1.20.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Dehydratase-like › ILVD_EDD 0.58 42.0 4.20e-01 76.5% 72.8%
3494566 7516.1.1.8 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Galactosyl_T 0.58 47.0 3.83e-01 89.3% 91.6%
3190180 2005.1.1.38 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTU2 0.58 47.0 3.52e-01 88.6% 59.7%
3190036 2007.1.5.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like 0.57 43.0 4.53e-01 77.9% 91.5%
4379372 2004.1.1.10 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab 0.57 45.0 3.48e-01 83.9% 78.8%
3300280 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.57 45.0 3.97e-01 85.2% 95.6%
3287018 2007.13.1.1 a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit › CobN-Mg_chel 0.56 49.0 4.53e-01 94.0% 92.6%
3264189 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.56 43.0 3.71e-01 81.2% 77.6%
5050628 2006.1.6.21 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE 0.55 47.0 4.09e-01 91.3% 73.8%
4983079 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.55 43.0 3.65e-01 82.6% 65.1%
4975716 7566.1.1.2 a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N 0.55 39.0 3.66e-01 85.2% 58.4%
3242208 7516.1.1.8 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Galactosyl_T 0.55 44.0 3.43e-01 86.6% 72.6%
4946457 7523.1.1.28 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_8 0.54 45.0 3.42e-01 89.3% 75.8%
4359810 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.54 46.0 3.79e-01 91.9% 71.9%
5016873 2007.1.14.33 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › CGGC 0.54 43.0 4.48e-01 87.2% 93.3%
5069110 2007.1.5.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG 0.54 44.0 4.43e-01 88.6% 96.7%
3925518 7590.1.1.9 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › PF29016 0.54 45.0 4.62e-01 93.3% 95.2%
4382076 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.54 44.0 3.73e-01 88.6% 90.6%
4979210 7566.1.1.2 a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N 0.53 37.0 3.50e-01 84.6% 56.8%
3697018 7516.1.1.77 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF3405 0.53 42.0 3.09e-01 85.2% 70.8%
4029456 7528.1.1.4 a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › AMG1_III 0.52 42.0 3.92e-01 84.6% 77.2%
3510301 7516.1.1.37 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CHGN 0.52 39.0 3.25e-01 78.5% 94.2%
5009774 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.51 37.0 3.70e-01 85.9% 72.7%
1523054 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.51 37.0 4.10e-01 75.2% 100.0%
3575415 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.51 41.0 3.72e-01 87.2% 94.1%
4998490 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.50 42.0 3.62e-01 91.3% 89.8%
3885829 7516.1.1.37 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CHGN 0.50 39.0 3.21e-01 81.9% 92.5%
D3 medium residues 307-423
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20629.3 best GD_AH_C 129.7 1.70e-37 100.0% 48.4%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tj7A03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.58 27.0 3.33e-01 86.3% 69.0%
4fzlA01 1.10.150.790 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.52 33.0 3.70e-01 97.4% 83.9%
3fseB02 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.51 43.0 4.06e-01 93.2% 84.0%
2gs4A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 43.0 3.92e-01 94.0% 83.5%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4681149 7512.1.1.124 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › GD_AH_C 1.00 98.0 6.93e-01 100.0% 40.3%
3589824 2004.1.1.875 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GD_AH_C 0.98 96.0 7.15e-01 100.0% 47.8%
3518126 2003.1.1.192 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GD_AH_C 0.98 95.0 6.98e-01 100.0% 45.0%
3388143 2003.1.1.192 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GD_AH_C 0.96 93.0 6.97e-01 100.0% 47.2%
4550276 2007.1.2.35 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › GD_AH_C 0.95 92.0 6.83e-01 100.0% 47.1%
3285620 4953.1.1.2 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ADSL_C 0.53 27.0 3.35e-01 82.9% 80.0%
5053735 4953.1.1.2 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ADSL_C 0.51 26.0 3.22e-01 82.9% 74.7%
5040942 150.1.1.7 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF892 0.51 44.0 4.07e-01 94.0% 88.0%
D4 medium residues 424-511
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20629.3 best GD_AH_C 89.3 3.60e-25 100.0% 34.3%
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wadB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.69 50.0 3.68e-01 76.1% 53.4%
4ml3D00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 50.0 4.40e-01 76.1% 62.6%
3gmsA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 45.0 4.04e-01 70.5% 54.8%
7bovA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.67 49.0 3.81e-01 78.4% 57.7%
1c3pA00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.66 47.0 3.13e-01 76.1% 23.4%
1lluA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 44.0 3.81e-01 70.5% 50.7%
3q7rA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 45.0 4.17e-01 73.9% 62.7%
3otgA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.63 45.0 3.33e-01 75.0% 40.2%
3abiA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 51.0 4.07e-01 87.5% 46.5%
1a49A01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.63 45.0 3.63e-01 76.1% 45.5%
1a3wA01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.62 45.0 3.76e-01 76.1% 51.6%
3clmA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 41.0 2.78e-01 70.5% 56.2%
1iirA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.60 43.0 3.26e-01 75.0% 52.0%
5dp2A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 43.0 3.70e-01 75.0% 48.2%
5o1pA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 47.0 3.78e-01 87.5% 49.1%
2iyaA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 43.0 3.19e-01 78.4% 56.3%
7oo1A02 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.57 41.0 3.78e-01 76.1% 62.7%
1f0kA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 51.0 4.04e-01 97.7% 95.4%
2e28A03 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.57 41.0 3.62e-01 76.1% 54.8%
3hgmA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 39.0 3.36e-01 73.9% 75.5%
3okpA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 48.0 3.80e-01 97.7% 94.7%
2vn8A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 45.0 3.55e-01 90.9% 86.3%
6d9yA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 47.0 3.42e-01 97.7% 87.3%
3o26A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 47.0 3.27e-01 97.7% 95.9%
2a4kB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 47.0 3.65e-01 97.7% 89.3%
5hn3A00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.53 41.0 2.88e-01 87.5% 61.7%
3vayA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 44.0 3.85e-01 97.7% 95.8%
1o97D01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 41.0 3.28e-01 87.5% 90.5%
6ifdB00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.52 45.0 3.38e-01 100.0% 86.8%
4gbjC01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 37.0 3.12e-01 76.1% 91.7%
6ckmA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.51 45.0 3.38e-01 100.0% 88.4%
1qyiA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.51 44.0 3.55e-01 100.0% 99.5%
1qwjB00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.51 44.0 3.33e-01 100.0% 86.9%
3gqvA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 44.0 3.49e-01 100.0% 74.2%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4006212 2003.1.1.192 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GD_AH_C 1.00 98.0 6.32e-01 100.0% 28.4%
4681149 7512.1.1.124 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › GD_AH_C 1.00 96.0 6.32e-01 98.9% 30.0%
4550276 2007.1.2.35 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › GD_AH_C 0.97 86.0 5.87e-01 93.2% 31.8%
3518126 2003.1.1.192 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GD_AH_C 0.96 80.0 5.45e-01 89.8% 29.2%
3388143 2003.1.1.192 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GD_AH_C 0.96 89.0 6.12e-01 98.9% 34.0%
3589824 2004.1.1.875 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GD_AH_C 0.95 81.0 5.60e-01 94.3% 31.8%
4634054 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.69 50.0 4.47e-01 76.1% 64.0%
3910068 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.68 50.0 3.97e-01 78.4% 55.6%
4305337 7512.1.1.117 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_28, Glyco_tran_28_C 0.67 55.0 3.62e-01 90.9% 44.5%
3599286 7518.1.1.0 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like 0.65 47.0 4.08e-01 76.1% 58.5%
4014028 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.64 49.0 4.18e-01 81.8% 57.2%
3989326 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.64 46.0 4.48e-01 76.1% 72.0%
3348829 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 47.0 4.15e-01 76.1% 74.4%
5027900 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.63 45.0 3.86e-01 76.1% 52.0%
3687442 2004.1.1.132 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DLIC 0.63 47.0 3.12e-01 79.5% 74.8%
3630392 7518.1.1.1 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.62 45.0 3.96e-01 76.1% 57.9%
5038350 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.62 44.0 4.22e-01 75.0% 68.6%
4941226 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 43.0 3.82e-01 72.7% 51.9%
5080764 7518.1.1.0 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like 0.61 44.0 3.96e-01 75.0% 65.8%
4201409 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.60 44.0 3.50e-01 78.4% 72.1%
3927898 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.60 43.0 4.09e-01 77.3% 70.0%
5040189 7518.1.1.0 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like 0.60 43.0 3.89e-01 75.0% 65.8%
4324645 7518.1.1.1 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.58 42.0 3.73e-01 76.1% 56.9%
3056597 7518.1.1.1 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.58 41.0 3.69e-01 75.0% 61.1%
5051118 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.58 42.0 3.95e-01 77.3% 70.9%
4445463 7512.1.1.10 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_28 0.57 50.0 3.96e-01 97.7% 95.1%
1517806 7518.1.1.1 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.57 41.0 3.68e-01 76.1% 58.3%
4489672 7512.1.1.33 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_41 0.57 51.0 3.94e-01 100.0% 76.9%
4301522 7519.1.1.1 a/b three-layered sandwiches › ATP synthase (F1-ATPase), gamma subunit › ATP synthase (F1-ATPase), gamma subunit › ATP synthase (F1-ATPase), gamma subunit › ATP-synt 0.57 42.0 3.12e-01 81.8% 38.1%
4323951 7519.1.1.1 a/b three-layered sandwiches › ATP synthase (F1-ATPase), gamma subunit › ATP synthase (F1-ATPase), gamma subunit › ATP synthase (F1-ATPase), gamma subunit › ATP-synt 0.57 42.0 3.13e-01 81.8% 37.3%
4192094 2003.1.1.70 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N_2 0.56 46.0 3.32e-01 89.8% 64.7%
4221223 7512.1.1.38 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › EryCIII-like_N 0.56 40.0 3.04e-01 75.0% 98.0%
4953504 7516.1.1.11 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CTP_transf_3 0.55 48.0 3.63e-01 100.0% 87.6%
3694546 2003.1.1.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N 0.54 48.0 3.84e-01 100.0% 78.3%
2775295 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.54 46.0 3.79e-01 97.7% 94.7%
4354763 7516.1.1.10 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CofC 0.53 46.0 3.52e-01 98.9% 79.4%
5046872 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.53 47.0 3.72e-01 100.0% 83.7%
4665789 7519.1.1.1 a/b three-layered sandwiches › ATP synthase (F1-ATPase), gamma subunit › ATP synthase (F1-ATPase), gamma subunit › ATP synthase (F1-ATPase), gamma subunit › ATP-synt 0.53 40.0 2.94e-01 81.8% 36.7%
5062908 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.53 46.0 3.64e-01 97.7% 96.8%
4948526 206.1.3.8 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 0.53 46.0 3.10e-01 100.0% 88.1%
5079340 7516.1.1.11 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CTP_transf_3 0.53 46.0 3.45e-01 100.0% 88.7%
10295 7516.1.1.11 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CTP_transf_3 0.52 46.0 3.44e-01 100.0% 88.4%
4930131 7516.1.1.11 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CTP_transf_3 0.52 45.0 3.37e-01 100.0% 83.0%
3808886 2487.1.1.7 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.52 38.0 3.48e-01 80.7% 60.0%
2507438 7516.1.1.11 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CTP_transf_3 0.52 45.0 3.38e-01 100.0% 86.8%
4562695 7516.1.1.10 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CofC 0.51 43.0 3.36e-01 98.9% 81.8%
4967526 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.51 44.0 3.14e-01 100.0% 44.5%
4615601 2003.1.1.31 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CbiJ 0.50 43.0 3.88e-01 97.7% 99.2%
4972354 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.50 41.0 3.59e-01 92.0% 97.9%