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CAKLQF020000021.1__CAH1090700.1__SAMEA5780031_03238__00060
Bact-VirCAKLQF020000021.1__CAH1090700.1__SAMEA5780031_03238__00060
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-228
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03573.20 best | OprD | 45.6 | 7.70e-12 | 100.0% | 51.6% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5dl8A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.94 | 92.0 | 7.03e-01 | 100.0% | 54.0% |
| 5dl7A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.94 | 91.0 | 6.93e-01 | 100.0% | 52.7% |
| 5dl5A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.92 | 89.0 | 6.67e-01 | 100.0% | 47.4% |
| 3jtyB01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.89 | 87.0 | 6.72e-01 | 100.0% | 53.0% |
| 4frxA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.89 | 86.0 | 6.55e-01 | 100.0% | 49.7% |
| 3sybA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.89 | 78.0 | 5.89e-01 | 100.0% | 43.6% |
| 7vu0A01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.86 | 82.0 | 6.20e-01 | 100.0% | 50.8% |
| 6eheA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.66 | 61.0 | 5.23e-01 | 100.0% | 64.5% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.66 | 27.0 | 4.36e-01 | 85.4% | 100.0% |
| 2w16A03 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.63 | 60.0 | 4.25e-01 | 100.0% | 54.3% |
| 1kmoA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.63 | 59.0 | 4.28e-01 | 100.0% | 55.5% |
| 1a0sP00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.62 | 59.0 | 4.55e-01 | 100.0% | 55.0% |
| 4aipC02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.62 | 57.0 | 4.09e-01 | 100.0% | 55.4% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.61 | 57.0 | 3.94e-01 | 100.0% | 43.0% |
| 1xkwA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 56.0 | 4.08e-01 | 100.0% | 49.4% |
| 6wilA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.60 | 55.0 | 4.55e-01 | 100.0% | 63.0% |
| 3v89A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.58 | 53.0 | 3.79e-01 | 100.0% | 53.0% |
| 8p97A01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.57 | 53.0 | 3.68e-01 | 100.0% | 42.5% |
| 4ggtB00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.54 | 28.0 | 3.75e-01 | 84.8% | 91.5% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 33.0 | 3.72e-01 | 77.3% | 77.1% |
| 5azpA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.54 | 24.0 | 3.58e-01 | 84.8% | 98.8% |
| 2porA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.54 | 50.0 | 4.32e-01 | 100.0% | 69.4% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 26.0 | 3.18e-01 | 79.3% | 70.5% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 35.0 | 3.83e-01 | 97.0% | 84.5% |
| 4c4vB02 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.51 | 46.0 | 3.80e-01 | 100.0% | 80.2% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3966665 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.94 | 92.0 | 6.80e-01 | 100.0% | 49.1% |
| 3968316 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.94 | 92.0 | 6.73e-01 | 100.0% | 49.9% |
| 3968681 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.94 | 91.0 | 6.80e-01 | 100.0% | 50.2% |
| 1734925 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.94 | 91.0 | 6.93e-01 | 100.0% | 52.7% |
| 3966214 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.93 | 91.0 | 6.88e-01 | 100.0% | 52.8% |
| 3969139 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.93 | 91.0 | 6.68e-01 | 100.0% | 47.6% |
| 3966107 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.93 | 90.0 | 6.57e-01 | 100.0% | 48.7% |
| 3970069 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.92 | 90.0 | 6.86e-01 | 100.0% | 51.9% |
| 1734923 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.92 | 89.0 | 6.67e-01 | 100.0% | 47.5% |
| 3945018 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.91 | 87.0 | 6.70e-01 | 100.0% | 50.3% |
| 1307904 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.89 | 86.0 | 6.53e-01 | 100.0% | 49.1% |
| 3838584 | 5084.5.1.25 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › HP_OMP_2 | 0.76 | 72.0 | 5.34e-01 | 100.0% | 49.0% |
| 4458963 | 5084.5.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 | 0.68 | 64.0 | 5.20e-01 | 100.0% | 60.6% |
| 4494387 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.68 | 63.0 | 4.50e-01 | 100.0% | 49.3% |
| 4066147 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.68 | 64.0 | 5.29e-01 | 100.0% | 65.2% |
| 4886289 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.67 | 62.0 | 4.45e-01 | 100.0% | 67.8% |
| 4411442 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.67 | 62.0 | 4.44e-01 | 100.0% | 45.4% |
| 4655696 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.66 | 61.0 | 4.48e-01 | 100.0% | 66.3% |
| 3385526 | 5084.10.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD | 0.66 | 60.0 | 4.36e-01 | 100.0% | 38.2% |
| None | — | 0.66 | 61.0 | 4.45e-01 | 100.0% | 67.0% | |
| 4412478 | 5084.10.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD,LptD_2 | 0.66 | 61.0 | 4.39e-01 | 100.0% | 64.2% |
| 4196334 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.65 | 61.0 | 4.30e-01 | 100.0% | 65.9% |
| 4668983 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.64 | 34.0 | 3.80e-01 | 76.3% | 63.7% |
| 1828692 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.64 | 59.0 | 4.20e-01 | 100.0% | 55.6% |
| 1758278 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.63 | 59.0 | 4.23e-01 | 100.0% | 51.0% |
| 3942551 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.63 | 60.0 | 4.54e-01 | 100.0% | 55.4% |
| 3499326 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.63 | 48.0 | 4.20e-01 | 99.0% | 53.6% |
| 3970531 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.62 | 58.0 | 4.05e-01 | 100.0% | 53.2% |
| 5033097 | 5084.5.1.70 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DUF1302 | 0.62 | 57.0 | 4.51e-01 | 99.5% | 69.1% |
| 4100381 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.62 | 58.0 | 4.19e-01 | 100.0% | 47.1% |
| 3971477 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.61 | 56.0 | 3.98e-01 | 100.0% | 51.1% |
| 4865042 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.61 | 57.0 | 4.19e-01 | 100.0% | 57.3% |
| 4098598 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.61 | 57.0 | 4.10e-01 | 100.0% | 45.0% |
| 3974137 | 5084.5.1.69 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › B-barrel_PelB_C | 0.61 | 57.0 | 4.81e-01 | 100.0% | 69.8% |
| 1718522 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.60 | 56.0 | 4.08e-01 | 100.0% | 49.5% |
| 2755875 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.60 | 56.0 | 4.09e-01 | 100.0% | 59.5% |
| 4269370 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.60 | 56.0 | 3.91e-01 | 100.0% | 47.0% |
| 4188949 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.60 | 55.0 | 4.00e-01 | 99.0% | 67.8% |
| 4591679 | 5084.5.1.18 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C | 0.60 | 55.0 | 4.46e-01 | 100.0% | 54.4% |
| 3965621 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.59 | 54.0 | 3.64e-01 | 100.0% | 49.4% |
| 4174253 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.58 | 54.0 | 3.95e-01 | 100.0% | 45.8% |
| 1769389 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.58 | 53.0 | 3.84e-01 | 100.0% | 49.1% |
| 3963279 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.55 | 50.0 | 4.29e-01 | 99.0% | 69.0% |
| 2156904 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.54 | 47.0 | 3.88e-01 | 92.9% | 79.2% |
| 4356082 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.51 | 46.0 | 3.85e-01 | 96.0% | 70.9% |
| 3838722 | 5084.3.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 | 0.51 | 44.0 | 3.77e-01 | 91.9% | 85.7% |
| 139764 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.51 | 46.0 | 4.12e-01 | 99.0% | 70.2% |
| 4009884 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.50 | 47.0 | 4.01e-01 | 98.5% | 74.3% |
| 3979621 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.50 | 46.0 | 3.98e-01 | 98.5% | 74.4% |
| 4234836 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.50 | 47.0 | 4.02e-01 | 99.0% | 74.1% |
| 3971932 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.50 | 46.0 | 3.20e-01 | 98.0% | 38.7% |
D2
medium
residues 229-395
Domain cluster:
rep: NC_049954.1__YP_009910032.1__H3V36_gp61__00061__D147-380
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03573.20 best | OprD | 75.7 | 5.40e-21 | 99.4% | 43.0% |
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3sy9C01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.95 | 92.0 | 6.89e-01 | 100.0% | 55.2% |
| 5dl8A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.94 | 92.0 | 6.66e-01 | 100.0% | 44.0% |
| 5dl7A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.94 | 92.0 | 6.59e-01 | 100.0% | 46.3% |
| 3jtyB01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.94 | 91.0 | 6.68e-01 | 100.0% | 46.2% |
| 3sybA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.94 | 91.0 | 6.52e-01 | 100.0% | 47.8% |
| 5dl5A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.94 | 91.0 | 6.49e-01 | 100.0% | 48.8% |
| 4frxA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.93 | 90.0 | 6.54e-01 | 100.0% | 49.2% |
| 7vu0A01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.88 | 84.0 | 6.03e-01 | 99.4% | 48.9% |
| 1bt9A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.73 | 67.0 | 5.14e-01 | 99.4% | 47.1% |
| 2f1cX00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.72 | 66.0 | 5.62e-01 | 100.0% | 63.9% |
| 3qlbA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.71 | 67.0 | 4.59e-01 | 100.0% | 49.6% |
| 1t16A00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.71 | 68.0 | 4.87e-01 | 99.4% | 56.9% |
| 4aipC02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.71 | 67.0 | 4.54e-01 | 100.0% | 47.3% |
| 1xkwA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.70 | 66.0 | 4.53e-01 | 100.0% | 50.0% |
| 3efmA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.70 | 65.0 | 4.72e-01 | 100.0% | 54.8% |
| 2w16A03 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.69 | 66.0 | 4.46e-01 | 100.0% | 51.0% |
| 3njtA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.69 | 61.0 | 4.95e-01 | 100.0% | 51.6% |
| 5fokA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.69 | 66.0 | 4.46e-01 | 100.0% | 48.5% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.69 | 64.0 | 4.26e-01 | 100.0% | 38.0% |
| 1fepA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.69 | 65.0 | 4.41e-01 | 100.0% | 45.5% |
| 1a0sP00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.67 | 64.0 | 4.67e-01 | 100.0% | 55.0% |
| 3vy8X00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.67 | 63.0 | 4.92e-01 | 100.0% | 59.2% |
| 3fhhA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.66 | 62.0 | 4.34e-01 | 100.0% | 45.5% |
| 2oojA00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.65 | 41.0 | 4.61e-01 | 77.2% | 80.2% |
| 3bryA00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.65 | 60.0 | 4.51e-01 | 98.8% | 59.6% |
| 1af6A00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.65 | 60.0 | 4.38e-01 | 98.2% | 47.0% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.63 | 40.0 | 4.28e-01 | 76.0% | 72.8% |
| 1uynX00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.63 | 58.0 | 4.77e-01 | 97.0% | 60.9% |
| 1bxwA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.61 | 41.0 | 4.12e-01 | 74.3% | 66.3% |
| 2vdfA00 | 2.40.128.100 | Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin | 0.58 | 54.0 | 4.83e-01 | 97.0% | 82.2% |
| 2okmA00 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 33.0 | 3.50e-01 | 96.4% | 65.1% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.54 | 45.0 | 4.68e-01 | 91.6% | 94.2% |
| 4hzoA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 40.0 | 3.30e-01 | 77.2% | 85.4% |
| 4rlcA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 38.0 | 4.16e-01 | 92.8% | 93.3% |
| 1av4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 39.0 | 2.92e-01 | 79.6% | 90.3% |
| 3q1nA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 38.0 | 3.17e-01 | 77.8% | 100.0% |
| 2bmoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 35.0 | 3.39e-01 | 70.7% | 85.1% |
| 2yzcA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.50 | 43.0 | 3.54e-01 | 89.2% | 92.3% |
| 6f1uK02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.50 | 38.0 | 4.09e-01 | 90.4% | 91.7% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3966665 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.95 | 93.0 | 6.52e-01 | 100.0% | 45.2% |
| 3968316 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.95 | 92.0 | 6.41e-01 | 99.4% | 43.4% |
| 1734925 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.94 | 92.0 | 6.59e-01 | 100.0% | 46.3% |
| 3966107 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.94 | 91.0 | 6.36e-01 | 100.0% | 43.2% |
| 3970069 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.94 | 90.0 | 6.48e-01 | 98.2% | 48.1% |
| 1734923 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.94 | 91.0 | 6.49e-01 | 100.0% | 48.9% |
| 3945018 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.94 | 90.0 | 6.56e-01 | 99.4% | 49.0% |
| 1307904 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.93 | 90.0 | 6.51e-01 | 100.0% | 48.6% |
| 3966214 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.92 | 90.0 | 6.43e-01 | 100.0% | 42.5% |
| 4008277 | 5084.5.1.62 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27458 | 0.84 | 64.0 | 5.02e-01 | 98.2% | 40.9% |
| 4100165 | 5084.8.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher_TcfC | 0.76 | 63.0 | 4.45e-01 | 99.4% | 31.4% |
| 4113659 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.76 | 72.0 | 5.36e-01 | 99.4% | 45.1% |
| 3964794 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.75 | 71.0 | 6.19e-01 | 99.4% | 68.8% |
| 3385752 | 5084.5.4.7 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › DUF2860 | 0.75 | 69.0 | 5.63e-01 | 99.4% | 55.7% |
| 3965708 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.74 | 65.0 | 5.68e-01 | 100.0% | 64.2% |
| 4213133 | 5084.5.1.6 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprB | 0.74 | 70.0 | 5.24e-01 | 100.0% | 52.0% |
| 3839826 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.73 | 68.0 | 5.08e-01 | 98.2% | 43.4% |
| 4241521 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.73 | 65.0 | 5.17e-01 | 100.0% | 50.0% |
| 4622073 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.72 | 69.0 | 5.37e-01 | 99.4% | 52.3% |
| 3941832 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.72 | 66.0 | 4.98e-01 | 98.2% | 48.2% |
| 4591311 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.71 | 67.0 | 4.24e-01 | 100.0% | 39.2% |
| 4006163 | 5084.5.4.13 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › DUF481, Porin_OmpG | 0.71 | 63.0 | 5.13e-01 | 99.4% | 53.2% |
| 2755875 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.70 | 66.0 | 4.50e-01 | 100.0% | 50.6% |
| 3942050 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.69 | 58.0 | 4.65e-01 | 91.0% | 47.5% |
| 2410570 | 5084.5.1.14 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DcaP | 0.69 | 64.0 | 5.01e-01 | 100.0% | 49.1% |
| 3944979 | 5084.5.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 | 0.69 | 62.0 | 5.63e-01 | 98.2% | 73.2% |
| 3979654 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.68 | 64.0 | 4.31e-01 | 100.0% | 47.7% |
| 1718522 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.68 | 64.0 | 4.41e-01 | 100.0% | 50.3% |
| 3942866 | 5084.5.1.20 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_8 | 0.68 | 65.0 | 4.86e-01 | 100.0% | 64.3% |
| 4027955 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.68 | 61.0 | 4.71e-01 | 95.8% | 60.0% |
| 3971984 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.68 | 63.0 | 4.51e-01 | 100.0% | 48.7% |
| 3978947 | 5084.5.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 | 0.67 | 64.0 | 4.76e-01 | 100.0% | 62.7% |
| 4319395 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.67 | 64.0 | 4.89e-01 | 100.0% | 47.7% |
| 3379458 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.67 | 62.0 | 4.87e-01 | 98.2% | 51.2% |
| 3971597 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.67 | 62.0 | 4.84e-01 | 100.0% | 49.9% |
| 3385526 | 5084.10.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD | 0.67 | 63.0 | 4.40e-01 | 100.0% | 40.8% |
| 4367390 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.66 | 62.0 | 4.39e-01 | 98.2% | 64.0% |
| 3973457 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.66 | 63.0 | 4.41e-01 | 100.0% | 40.0% |
| 3981236 | 5084.5.4.6 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › TraF_2 | 0.66 | 59.0 | 4.85e-01 | 99.4% | 54.8% |
| 3979621 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.66 | 61.0 | 4.90e-01 | 98.2% | 65.9% |
| 3975037 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.65 | 60.0 | 4.37e-01 | 98.2% | 47.1% |
| None | — | 0.65 | 60.0 | 4.29e-01 | 100.0% | 43.3% | |
| 4602917 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.65 | 59.0 | 4.64e-01 | 95.8% | 60.3% |
| 3470169 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.65 | 61.0 | 4.49e-01 | 100.0% | 78.8% |
| 4055728 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.65 | 58.0 | 4.60e-01 | 97.0% | 56.5% |
| 3964155 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.64 | 60.0 | 5.06e-01 | 98.2% | 62.4% |
| 4606189 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.63 | 59.0 | 4.49e-01 | 100.0% | 66.9% |
| 4533056 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.63 | 60.0 | 4.36e-01 | 100.0% | 51.8% |
| 4437932 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.63 | 58.0 | 4.53e-01 | 96.4% | 61.5% |
| 3967388 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.63 | 59.0 | 4.68e-01 | 98.2% | 59.4% |
| 3387633 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.63 | 56.0 | 4.52e-01 | 97.6% | 56.2% |
| 3941401 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.62 | 57.0 | 4.33e-01 | 100.0% | 50.9% |
| 3838102 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.62 | 58.0 | 4.14e-01 | 100.0% | 42.8% |
| 3803010 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.62 | 57.0 | 4.95e-01 | 100.0% | 85.1% |
| 3964572 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.61 | 56.0 | 4.56e-01 | 96.4% | 56.3% |
| 4515973 | 5084.5.1.32 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › LOC400499 | 0.59 | 44.0 | 3.05e-01 | 97.0% | 24.0% |
| 884 | 5084.2.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPT-like › OMPT-like › OpcA | 0.58 | 54.0 | 4.83e-01 | 97.0% | 82.2% |
| 3360262 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.58 | 41.0 | 3.93e-01 | 97.0% | 63.2% |
| 3412367 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.57 | 44.0 | 4.34e-01 | 91.6% | 74.6% |
| 223918 | 3622.1.1.1 ↗ | beta meanders › Surface-exposed lipoprotein adhesin JlpA › Surface-exposed lipoprotein adhesin JlpA › Surface-exposed lipoprotein adhesin JlpA › JLPA | 0.57 | 52.0 | 4.07e-01 | 99.4% | 57.6% |
| 4823574 | 4030.1.1.1 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › F_actin_cap_B | 0.56 | 46.0 | 4.83e-01 | 92.2% | 92.3% |
| 4025861 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.56 | 47.0 | 4.67e-01 | 91.6% | 85.3% |
| 3544803 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.55 | 48.0 | 4.55e-01 | 97.0% | 79.0% |
| 3748213 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.54 | 46.0 | 3.86e-01 | 96.4% | 54.3% |
| 4025435 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.54 | 46.0 | 4.42e-01 | 91.0% | 82.6% |
| 3242425 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.53 | 46.0 | 4.39e-01 | 97.0% | 79.5% |
| 4668983 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.53 | 44.0 | 4.52e-01 | 91.6% | 90.6% |
| 3407004 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.53 | 45.0 | 4.06e-01 | 96.4% | 67.7% |
| 3622962 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.52 | 47.0 | 4.08e-01 | 96.4% | 64.7% |
| 3484227 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.51 | 40.0 | 4.04e-01 | 91.6% | 81.8% |
| 3507449 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.51 | 44.0 | 4.14e-01 | 97.0% | 75.6% |