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CAKLQF020000023.1__CAH1091709.1__SAMEA5780031_03382__00048

Bact-Vir

CAKLQF020000023.1__CAH1091709.1__SAMEA5780031_03382__00048

Identity

Kingdom:
phage

Quality

58.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 58-195
PDB
Domain cluster: rep: MF356679.1__ASR76345.1__D6_42__00042__D3-153
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 33.0 4.14e-01 81.9% 76.5%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.64 27.0 3.90e-01 95.7% 88.3%
2je2A00 3.50.70.20 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › Cytochrome P460 0.63 37.0 3.51e-01 94.2% 50.3%
3vrdB03 3.90.760.10 Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain 0.61 26.0 3.47e-01 88.4% 73.0%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.60 29.0 2.84e-01 100.0% 41.6%
4ojdH01 2.60.98.60 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 0.59 36.0 3.43e-01 100.0% 51.2%
4pc3C02 3.30.479.20 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Elongation factor Ts, dimerisation domain 0.57 25.0 3.11e-01 80.4% 64.0%
4fumA01 2.20.230.10 Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. 0.55 28.0 3.66e-01 75.4% 90.5%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 25.0 3.24e-01 83.3% 74.7%
3f62A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 27.0 3.03e-01 71.7% 64.8%
3uaqB02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.51 26.0 2.46e-01 81.9% 37.4%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.50 37.0 3.78e-01 100.0% 79.4%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3681710 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.75 36.0 4.38e-01 94.9% 68.4%
4643976 101.1.2.654 ↗ alpha arrays › HTH › HTH › winged helix domain › RPA 0.64 59.0 5.59e-01 100.0% 88.5%
3524331 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 29.0 3.57e-01 74.6% 73.3%
3918277 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 29.0 3.06e-01 84.8% 53.8%
3709829 305.2.1.1 ↗ a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.53 30.0 3.40e-01 72.5% 71.4%
3773175 883.1.1.1 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.52 36.0 3.28e-01 94.9% 52.4%
3569021 883.1.1.1 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.51 36.0 3.23e-01 94.9% 52.4%
4966376 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.51 38.0 2.94e-01 78.3% 86.4%