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CAKLQF020000023.1__CAH1091741.1__SAMEA5780031_03390__00056
Bact-VirCAKLQF020000023.1__CAH1091741.1__SAMEA5780031_03390__00056
Identity
- Kingdom:
- phage
Quality
77.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-127
D2
high
residues 135-259
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dfaA03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.63 | 44.0 | 4.96e-01 | 84.0% | 95.8% |
| 1j6wA00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.59 | 41.0 | 3.77e-01 | 70.4% | 85.7% |
| 4xchA00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.59 | 42.0 | 3.98e-01 | 72.8% | 94.0% |
| 1gd8A00 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.56 | 30.0 | 3.28e-01 | 95.2% | 60.0% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.56 | 40.0 | 2.97e-01 | 74.4% | 52.2% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.56 | 34.0 | 3.80e-01 | 72.8% | 76.5% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.55 | 37.0 | 3.80e-01 | 72.0% | 70.2% |
| 4v19R01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.55 | 30.0 | 3.18e-01 | 99.2% | 57.1% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 27.0 | 3.07e-01 | 71.2% | 61.6% |
| 3cueB00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.54 | 44.0 | 4.05e-01 | 88.8% | 68.3% |
| 2z04B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 37.0 | 3.23e-01 | 70.4% | 82.3% |
| 3d3bJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.53 | 36.0 | 4.20e-01 | 93.6% | 100.0% |
| 3n89A01 | 3.30.310.270 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.52 | 36.0 | 3.12e-01 | 70.4% | 80.9% |
| 7qh7701 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.52 | 37.0 | 3.21e-01 | 72.8% | 80.0% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4059572 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.63 | 46.0 | 4.88e-01 | 86.4% | 86.4% |
| 4971395 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.62 | 43.0 | 4.85e-01 | 82.4% | 94.7% |
| 4937054 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.62 | 43.0 | 4.66e-01 | 84.8% | 85.7% |
| 4128067 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.62 | 46.0 | 4.84e-01 | 85.6% | 89.1% |
| 3704413 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.61 | 45.0 | 3.11e-01 | 75.2% | 30.6% |
| 5028136 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.61 | 45.0 | 4.71e-01 | 85.6% | 84.3% |
| 4937024 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.61 | 41.0 | 4.66e-01 | 84.8% | 94.4% |
| 4970999 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.61 | 54.0 | 5.00e-01 | 100.0% | 87.9% |
| 4011959 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.59 | 48.0 | 4.17e-01 | 88.8% | 85.1% |
| 4980006 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.58 | 45.0 | 4.34e-01 | 83.2% | 100.0% |
| 4342044 | 309.1.1.3 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › LuxS | 0.57 | 41.0 | 3.70e-01 | 73.6% | 83.4% |
| 4198784 | 309.1.1.3 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › LuxS | 0.57 | 41.0 | 3.78e-01 | 74.4% | 89.9% |
| 3230573 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 40.0 | 2.85e-01 | 72.8% | 34.9% |
| 5081161 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.56 | 42.0 | 3.94e-01 | 78.4% | 80.0% |
| 3488016 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.56 | 40.0 | 3.09e-01 | 80.0% | 31.7% |
| 4024665 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 39.0 | 2.97e-01 | 74.4% | 29.8% |
| 4943870 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.55 | 39.0 | 4.10e-01 | 75.2% | 87.8% |
| 5022512 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.55 | 39.0 | 3.69e-01 | 75.2% | 63.9% |
| 4980261 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 38.0 | 4.08e-01 | 86.4% | 86.7% |
| 5007648 | 873.1.1.13 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › ATC_hydrolase | 0.54 | 43.0 | 3.64e-01 | 86.4% | 90.0% |
| 4997255 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 38.0 | 4.22e-01 | 88.8% | 94.0% |
| 4954912 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.53 | 40.0 | 3.65e-01 | 87.2% | 57.7% |
| 3598748 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.53 | 41.0 | 3.15e-01 | 81.6% | 64.9% |
| 5038306 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.53 | 32.0 | 3.66e-01 | 72.8% | 83.3% |
| 271678 | 304.4.1.9 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Chlor_dismutase | 0.52 | 37.0 | 3.70e-01 | 74.4% | 79.7% |
| 5057148 | 304.111.1.0 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like | 0.52 | 31.0 | 3.22e-01 | 100.0% | 62.6% |
| 4931524 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.51 | 40.0 | 3.74e-01 | 85.6% | 92.7% |
| 4933477 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.51 | 41.0 | 3.64e-01 | 87.2% | 91.4% |
| 3612456 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 36.0 | 2.82e-01 | 75.2% | 31.9% |
| 4953583 | 7523.1.1.17 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › OpuAC | 0.50 | 38.0 | 3.45e-01 | 79.2% | 69.2% |
| 4946992 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.50 | 41.0 | 3.67e-01 | 87.2% | 100.0% |