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CAKLQF020000023.1__CAH1091761.1__SAMEA5780031_03395__00061
Bact-VirCAKLQF020000023.1__CAH1091761.1__SAMEA5780031_03395__00061
Identity
- Kingdom:
- phage
Quality
88.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-80_198-288
Domain cluster:
rep: Ig7659_scaffold_8_prodigal-single.1__X__X__00005__D19-40_71-94_213-301
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hxiA01 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.58 | 40.0 | 4.00e-01 | 70.2% | 87.1% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.53 | 25.0 | 3.53e-01 | 73.3% | 94.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937054 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.57 | 34.0 | 4.07e-01 | 88.8% | 88.6% |
| 3692102 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.57 | 34.0 | 3.77e-01 | 71.4% | 72.8% |
| 3618884 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.56 | 39.0 | 3.41e-01 | 70.8% | 95.1% |
| 4995855 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.56 | 39.0 | 3.37e-01 | 70.2% | 95.2% |
| 4012104 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.55 | 38.0 | 3.34e-01 | 70.2% | 94.3% |
| 4955808 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.55 | 38.0 | 3.38e-01 | 70.2% | 94.6% |
| 4568030 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.54 | 38.0 | 3.29e-01 | 70.2% | 93.9% |
| 4947319 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.54 | 38.0 | 3.29e-01 | 70.2% | 93.9% |
| 5047006 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.54 | 31.0 | 3.70e-01 | 88.8% | 83.6% |
D2
high
residues 81-195
Domain cluster:
rep: Ig7659_scaffold_8_prodigal-single.1__X__X__00005__D96-210
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20390.4 best | DUF6685 | 115.7 | 3.50e-33 | 97.4% | 51.2% |