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CAKLQF020000024.1__CAH1091845.1__SAMEA5780031_03406__00005

Bact-Vir

CAKLQF020000024.1__CAH1091845.1__SAMEA5780031_03406__00005

Identity

Kingdom:
phage

Quality

88.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-130
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mc8A00 3.10.450.590 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.79 69.0 6.50e-01 95.7% 90.4%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.77 66.0 6.29e-01 93.6% 100.0%
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.77 66.0 6.35e-01 93.6% 100.0%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.73 66.0 6.12e-01 100.0% 95.8%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 63.0 5.97e-01 97.9% 82.5%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 63.0 5.81e-01 100.0% 93.5%
3er7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 60.0 5.50e-01 95.7% 95.9%
3ub1A01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 53.0 4.77e-01 96.8% 90.4%
2wadA01 6.20.70.10 Special › Other non-globular › Ubiquitin Ligase Nedd4; Chain: W; › 0.62 23.0 3.62e-01 94.7% 100.0%
3imoC00 3.30.920.70 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › 0.57 45.0 4.34e-01 90.4% 75.7%
6bm0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 49.0 3.32e-01 97.9% 42.1%
6bbtB01 2.60.40.3050 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 39.0 3.43e-01 72.3% 90.0%
1pfoA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.54 28.0 3.54e-01 96.8% 86.8%
3w0fA01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.54 47.0 4.41e-01 100.0% 95.0%
1jovA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 46.0 3.42e-01 98.9% 49.1%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.53 47.0 3.21e-01 97.9% 48.5%
1ki1B02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 41.0 3.65e-01 86.2% 90.8%
1k82B01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.52 45.0 4.16e-01 100.0% 92.9%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 45.0 3.19e-01 97.9% 44.9%
1n7vA01 2.105.10.10 Mainly Beta › 3 Propeller › Pseudo beta propeller › Pseudo beta propeller 0.51 43.0 3.50e-01 94.7% 49.7%
3kxeA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.50 33.0 3.34e-01 91.5% 66.0%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4104010 243.1.1.23 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 0.85 72.0 7.21e-01 90.4% 100.0%
5033517 243.1.1.23 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 0.82 71.0 7.02e-01 93.6% 100.0%
4960364 243.1.1.23 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 0.80 71.0 6.90e-01 96.8% 100.0%
4949878 243.1.1.23 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 0.79 71.0 6.74e-01 98.9% 98.2%
136977 243.1.1.20 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4878 0.77 66.0 6.35e-01 93.6% 100.0%
4032029 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.76 63.0 6.30e-01 88.3% 91.6%
3957605 243.1.1.35 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ORF_12_N 0.74 65.0 6.54e-01 96.8% 100.0%
3240119 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.71 60.0 5.85e-01 93.6% 100.0%
4015043 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.68 61.0 5.67e-01 100.0% 99.2%
1143749 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.68 40.0 4.93e-01 89.4% 94.8%
4950477 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.62 36.0 3.96e-01 91.5% 70.7%
3698130 216.1.1.14 a+b two layers › UBC-like › UBC-like › UBC-like › Med1 0.62 35.0 3.45e-01 92.6% 48.6%
5054994 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 30.0 3.98e-01 71.3% 91.7%
3711234 5.1.4.175 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT122_2nd 0.60 44.0 3.18e-01 98.9% 27.5%
4951171 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.60 35.0 3.90e-01 88.3% 75.7%
1883345 1099.1.1.1 a+b two layers › RNase inhibitor Dip › RNase inhibitor Dip › RNase inhibitor Dip › Dip 0.56 45.0 3.39e-01 89.4% 36.4%
3599544 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 47.0 3.24e-01 95.7% 26.0%
4028247 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 48.0 3.20e-01 97.9% 55.8%
4027423 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 48.0 3.26e-01 97.9% 38.5%
4609138 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.53 32.0 2.85e-01 92.6% 36.7%
5009473 243.3.1.77 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Ta0938 0.53 46.0 4.50e-01 94.7% 85.7%
4960615 5.1.3.277 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7133 0.53 42.0 2.89e-01 96.8% 23.9%
4029991 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 46.0 3.10e-01 97.9% 29.2%
5077103 5.1.11.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › PQQ_2 0.53 48.0 3.05e-01 100.0% 24.8%
5000931 244.4.1.2 a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases 0.53 42.0 3.37e-01 92.6% 43.8%
4047545 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 37.0 3.20e-01 73.4% 66.5%
3267019 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 47.0 3.21e-01 98.9% 54.2%
5015972 244.4.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit 0.52 38.0 3.92e-01 77.7% 86.7%
5031617 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.52 37.0 3.98e-01 73.4% 100.0%
3491346 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 46.0 3.07e-01 97.9% 37.0%
3682328 372.2.1.1 a+b complex topology › RNase A-like › EndoU-like › EndoU-like › XendoU 0.51 44.0 3.32e-01 100.0% 90.0%
3274206 5.1.4.433 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › HPS3_N 0.51 46.0 3.14e-01 100.0% 51.2%
3997759 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 46.0 2.98e-01 100.0% 43.1%
5061628 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.50 38.0 2.68e-01 79.8% 35.0%
4031135 6043.1.1.3 a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N 0.50 32.0 3.34e-01 92.6% 70.6%
D2 high residues 134-172_323-412
PDB
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xepB02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.87 83.0 6.38e-01 100.0% 97.7%
4hesA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.82 77.0 5.86e-01 99.2% 94.9%
4ewfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.81 75.0 5.80e-01 99.2% 94.4%
5hw3A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.80 74.0 5.71e-01 98.4% 96.3%
6bn3A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.80 74.0 5.71e-01 98.4% 97.8%
6izcA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.80 74.0 5.75e-01 99.2% 99.2%
3qhyA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.80 73.0 5.71e-01 98.4% 100.0%
2j7vB01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.79 73.0 5.71e-01 99.2% 96.9%
1w5dA01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.79 73.0 5.86e-01 100.0% 99.2%
2ex2A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.79 71.0 5.71e-01 97.7% 99.2%
5tfqA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.79 72.0 5.56e-01 99.2% 97.5%
1m6kA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.78 72.0 5.69e-01 98.4% 98.8%
3v39A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.78 67.0 5.36e-01 90.7% 93.3%
3p09A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.78 72.0 5.60e-01 99.2% 98.5%
4jf6A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.78 72.0 5.79e-01 100.0% 100.0%
2wuqB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.78 71.0 5.46e-01 99.2% 98.9%
1k38A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.77 71.0 5.72e-01 98.4% 97.5%
1e25A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.77 70.0 5.43e-01 99.2% 97.1%
3cjmA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.77 71.0 5.59e-01 99.2% 94.9%
3v3sA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.77 70.0 5.47e-01 99.2% 97.0%
1nrfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.77 70.0 5.57e-01 97.7% 95.9%
4mnrA02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.75 69.0 5.10e-01 99.2% 97.2%
3wa5B00 2.60.120.1690 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 5.11e-01 100.0% 98.4%
2uuvB01 3.40.462.40 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidase, cap domain/gating helix 0.57 38.0 3.06e-01 96.9% 33.3%
1r0uA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 39.0 3.82e-01 74.4% 93.0%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 38.0 3.33e-01 73.6% 97.5%
3hlzB01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.53 48.0 4.74e-01 100.0% 92.9%
4ew7A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 41.0 4.30e-01 85.3% 96.5%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.51 36.0 3.48e-01 71.3% 89.5%
3caxA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 41.0 4.02e-01 86.0% 85.5%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.51 38.0 2.89e-01 78.3% 98.6%
4meeA00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.50 40.0 3.05e-01 85.3% 95.7%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.50 41.0 4.04e-01 90.7% 82.0%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3950100 223.3.1.0 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins 0.87 82.0 7.59e-01 100.0% 98.7%
4369334 223.3.1.8 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.82 76.0 5.81e-01 98.4% 98.5%
4625649 223.3.1.6 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S13 0.82 76.0 6.77e-01 100.0% 87.6%
4568018 223.3.1.8 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.81 75.0 5.70e-01 99.2% 96.1%
4951648 223.3.1.6 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S13 0.81 74.0 6.64e-01 98.4% 94.9%
3285336 223.3.1.0 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins 0.79 73.0 6.82e-01 97.7% 94.8%
3165671 223.3.1.6 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S13 0.79 72.0 6.63e-01 98.4% 92.1%
4157404 223.3.1.8 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.79 73.0 5.52e-01 99.2% 93.7%
4162647 223.3.1.8 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.78 72.0 5.46e-01 99.2% 92.4%
4247068 223.3.1.3 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.78 72.0 5.67e-01 98.4% 98.8%
3290222 223.3.1.8 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.78 71.0 5.37e-01 96.9% 98.9%
3967491 223.3.1.6 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S13 0.78 72.0 6.90e-01 99.2% 97.9%
4090115 223.3.1.3 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.78 71.0 5.68e-01 98.4% 95.9%
4463774 223.3.1.8 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.78 72.0 6.41e-01 99.2% 99.4%
4465852 223.3.1.3 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.77 71.0 6.66e-01 98.4% 93.5%
3285474 223.3.1.8 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.76 69.0 5.58e-01 99.2% 96.7%
3283383 223.3.1.6 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S13 0.75 70.0 6.29e-01 100.0% 91.9%
3989971 223.3.1.8 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.74 69.0 6.50e-01 99.2% 94.7%
5073525 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.68 57.0 5.83e-01 99.2% 92.0%
5048375 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.68 57.0 5.82e-01 99.2% 92.0%
5053654 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 50.0 5.14e-01 93.8% 85.8%
4946344 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 50.0 4.88e-01 89.1% 72.4%
4979132 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.65 56.0 5.70e-01 100.0% 95.3%
4926836 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 56.0 5.75e-01 99.2% 99.2%
5049326 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 56.0 5.69e-01 100.0% 98.4%
4954977 304.6.1.1 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C 0.61 33.0 2.71e-01 96.9% 28.5%
4928046 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 51.0 5.31e-01 98.4% 100.0%
3290484 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.60 56.0 5.00e-01 99.2% 90.9%
3913066 223.2.1.36 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 0.59 53.0 4.71e-01 98.4% 88.0%
3605618 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 50.0 4.75e-01 93.0% 97.4%
3406485 1181.1.1.0 0.59 29.0 3.82e-01 76.7% 87.1%
3959664 304.6.1.0 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain 0.58 32.0 2.61e-01 100.0% 26.4%
4066540 223.1.1.134 a+b three layers › Profilin-like › sensor domains › sensor domains › PF30516 0.57 45.0 4.02e-01 85.3% 59.5%
3966283 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 42.0 4.18e-01 86.0% 72.1%
3713162 304.6.1.1 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C 0.56 40.0 3.06e-01 96.9% 31.7%
3944999 5084.8.1.0 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore 0.56 40.0 2.70e-01 73.6% 93.6%
3514856 1181.1.1.0 0.55 29.0 3.73e-01 79.8% 89.3%
3980013 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.54 40.0 2.76e-01 76.0% 97.1%
4646283 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.54 40.0 2.70e-01 76.0% 96.2%
3600107 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.54 42.0 3.40e-01 86.8% 42.4%
4954483 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.54 47.0 4.83e-01 100.0% 99.2%
4008074 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.54 39.0 2.63e-01 74.4% 97.1%
3980825 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.54 39.0 2.64e-01 75.2% 96.0%
4010676 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.53 39.0 2.68e-01 75.2% 96.6%
3291389 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.53 47.0 4.43e-01 98.4% 91.6%
3278990 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.53 48.0 4.47e-01 99.2% 89.2%
4009987 5084.8.1.0 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore 0.52 38.0 2.62e-01 75.2% 97.1%
5036897 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.51 47.0 4.54e-01 100.0% 97.9%
3714612 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.51 46.0 4.28e-01 100.0% 97.6%
D3 medium residues 178-320
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13354.13 best Beta-lactamase2 49.0 6.70e-13 85.3% 30.9%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ewfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.66 61.0 4.84e-01 97.9% 70.9%
1e25A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.65 61.0 4.75e-01 98.6% 72.7%
2j7vB01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.65 61.0 4.83e-01 97.9% 71.0%
4hesA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.65 60.0 4.73e-01 97.9% 68.4%
6izcA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.64 59.0 4.73e-01 98.6% 73.4%
2xepB02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.63 61.0 4.82e-01 98.6% 69.5%
1xp4A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.63 58.0 4.59e-01 97.2% 69.9%
2wuqB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.63 57.0 4.47e-01 96.5% 72.4%
5hw3A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.63 58.0 4.60e-01 97.9% 71.0%
3v3sA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.63 58.0 4.59e-01 97.9% 71.4%
1ghpA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.61 57.0 4.60e-01 98.6% 76.3%
3p09A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.61 56.0 4.52e-01 98.6% 75.4%
3hunA01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.61 55.0 4.31e-01 97.2% 65.5%
6bn3A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.60 56.0 4.50e-01 99.3% 73.4%
3qhyA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.59 55.0 4.44e-01 98.6% 74.4%
3cjmA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.59 56.0 4.45e-01 97.9% 68.2%
3mfdA01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 54.0 4.47e-01 97.2% 70.3%
2bcfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.57 53.0 4.21e-01 97.9% 63.2%
1nj4A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.56 52.0 4.19e-01 97.2% 66.0%
5df7A02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 45.0 3.42e-01 97.2% 66.2%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1842544 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.94 91.0 8.71e-01 100.0% 94.9%
3957597 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.88 84.0 8.07e-01 100.0% 93.8%
332649 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.86 60.0 6.96e-01 100.0% 93.6%
1179595 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.84 61.0 6.69e-01 100.0% 89.8%
1156509 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.83 60.0 6.77e-01 100.0% 93.8%
1156449 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.82 54.0 6.43e-01 100.0% 94.1%
3075871 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.80 58.0 6.46e-01 100.0% 93.0%
4298987 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.78 59.0 6.47e-01 100.0% 92.5%
4848667 223.3.1.8 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.78 57.0 6.35e-01 100.0% 93.9%
2092617 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.78 58.0 6.43e-01 100.0% 94.1%
4870 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.77 56.0 6.25e-01 100.0% 93.8%
1875688 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.77 56.0 5.54e-01 100.0% 70.4%
3963813 4019.1.1.2 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 0.77 56.0 6.36e-01 99.3% 96.4%
2833111 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.77 48.0 5.84e-01 100.0% 92.9%
4887114 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.75 55.0 6.11e-01 100.0% 93.9%
4864889 223.3.1.1 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.75 55.0 6.10e-01 100.0% 93.9%
141024 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.74 55.0 6.06e-01 100.0% 93.9%
3957658 4019.1.1.2 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 0.74 53.0 5.40e-01 97.9% 75.0%
1156456 4019.1.1.1 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.74 54.0 6.01e-01 100.0% 93.9%
4856421 223.3.1.8 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.74 49.0 5.43e-01 91.6% 83.5%
3290222 223.3.1.8 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.73 66.0 5.11e-01 100.0% 47.7%
3508640 4019.1.1.2 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 0.72 55.0 5.91e-01 100.0% 90.4%
3271175 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.71 49.0 5.69e-01 100.0% 94.3%
3165041 4019.1.1.2 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 0.71 50.0 5.66e-01 100.0% 92.7%
3970797 4019.1.1.0 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins 0.71 50.0 5.66e-01 100.0% 92.7%
4188430 4019.1.1.2 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 0.71 59.0 6.14e-01 100.0% 91.9%
3942144 4019.1.1.2 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 0.71 49.0 5.51e-01 100.0% 88.7%
4373127 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.70 61.0 6.34e-01 100.0% 97.0%
3291695 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.70 61.0 6.22e-01 92.3% 97.1%
4884 4019.1.1.2 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 0.67 56.0 5.88e-01 100.0% 94.7%
3164732 4019.1.1.3 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.63 44.0 4.92e-01 100.0% 91.8%
4284114 223.3.1.8 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.63 58.0 4.58e-01 97.9% 70.8%
4672684 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.61 57.0 4.53e-01 98.6% 71.4%
4628990 4019.1.1.3 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.59 40.0 4.63e-01 100.0% 98.0%
3282531 4019.1.1.6 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.59 55.0 4.46e-01 97.9% 77.2%
1918535 4019.1.1.3 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.55 41.0 4.47e-01 100.0% 94.0%
4665285 4019.1.1.0 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins 0.55 41.0 4.57e-01 100.0% 100.0%