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CAKLQF020000025.1__CAH1092116.1__SAMEA5780031_03485__00023
Bact-VirCAKLQF020000025.1__CAH1092116.1__SAMEA5780031_03485__00023
Identity
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-167
Domain cluster:
rep: ON470627.1__URC10665.1__X__00001__D8-184
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03695.19 best | UPF0149 | 90.6 | 1.90e-25 | 95.8% | 87.9% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1izmA00 | 1.20.120.740 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YgfB uncharacterised protein family PF03695 | 0.87 | 82.0 | 8.16e-01 | 98.8% | 97.6% |
| 4gytA00 | 1.20.120.740 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YgfB uncharacterised protein family PF03695 | 0.86 | 83.0 | 8.07e-01 | 99.4% | 94.9% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.54 | 20.0 | 2.72e-01 | 86.1% | 60.2% |
| 1q8cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.50 | 37.0 | 4.02e-01 | 86.7% | 94.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4094708 | 635.1.1.1 ↗ | alpha arrays › YgfB-like › YgfB-like › YgfB-like › UPF0149 | 0.89 | 85.0 | 8.35e-01 | 98.8% | 97.1% |
| 3967241 | 635.1.1.1 ↗ | alpha arrays › YgfB-like › YgfB-like › YgfB-like › UPF0149 | 0.89 | 85.0 | 8.55e-01 | 100.0% | 98.8% |
| 3983005 | 635.1.1.1 ↗ | alpha arrays › YgfB-like › YgfB-like › YgfB-like › UPF0149 | 0.89 | 85.0 | 8.30e-01 | 99.4% | 96.0% |
| 220107 | 635.1.1.1 ↗ | alpha arrays › YgfB-like › YgfB-like › YgfB-like › UPF0149 | 0.86 | 83.0 | 8.07e-01 | 99.4% | 94.9% |
| 4394957 | 635.1.1.1 ↗ | alpha arrays › YgfB-like › YgfB-like › YgfB-like › UPF0149 | 0.85 | 81.0 | 7.90e-01 | 99.4% | 94.9% |
| 3941721 | 635.1.1.1 ↗ | alpha arrays › YgfB-like › YgfB-like › YgfB-like › UPF0149 | 0.74 | 70.0 | 6.78e-01 | 99.4% | 96.6% |
| 3968894 | 635.1.1.1 ↗ | alpha arrays › YgfB-like › YgfB-like › YgfB-like › UPF0149 | 0.72 | 67.0 | 6.55e-01 | 97.6% | 97.7% |
| 3414762 | 5050.1.1.6 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP | 0.53 | 45.0 | 3.15e-01 | 90.3% | 80.3% |
| 3675059 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.51 | 44.0 | 3.15e-01 | 90.9% | 84.9% |