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CAKLQF020000025.1__CAH1092140.1__SAMEA5780031_03498__00035

Bact-Vir

CAKLQF020000025.1__CAH1092140.1__SAMEA5780031_03498__00035

Identity

Kingdom:
phage

Quality

89.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-60
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04060.19 best FeS 36.6 4.00e-09 58.9% 100.0%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4c1nA01 1.10.15.40 Mainly Alpha › Orthogonal Bundle › 3-methyladenine DNA Glycosylase II; Chain A, domain 3 › Electron transport complex subunit B, putative Fe-S cluster 0.87 78.0 7.78e-01 98.2% 96.5%
3rvyA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 51.0 4.26e-01 100.0% 63.6%
2kp6A00 1.10.10.1130 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Uncharacterised protein PF10982, DUF2789 0.54 41.0 3.81e-01 91.1% 94.9%
3gw7A00 1.10.3210.50 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › 0.52 42.0 3.01e-01 100.0% 45.1%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4063341 3858.1.1.1 few secondary structure elements › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › FeS 0.97 94.0 8.28e-01 100.0% 74.7%
4967802 3858.1.1.1 few secondary structure elements › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › FeS 0.95 89.0 9.05e-01 98.2% 100.0%
4560469 3858.1.1.1 few secondary structure elements › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › FeS 0.95 90.0 8.02e-01 100.0% 74.7%
4939004 3858.1.1.1 few secondary structure elements › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › FeS 0.91 81.0 8.17e-01 94.6% 96.4%
4989431 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.90 71.0 4.56e-01 82.1% 21.4%
4948583 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.89 66.0 4.42e-01 80.4% 23.4%
4268931 3858.1.1.1 few secondary structure elements › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › FeS 0.87 77.0 7.27e-01 94.6% 95.4%
5023343 3858.1.1.1 few secondary structure elements › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › FeS 0.87 79.0 7.31e-01 100.0% 85.7%
5048325 3858.1.1.1 few secondary structure elements › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › FeS 0.87 73.0 7.41e-01 91.1% 100.0%
5000016 3858.1.1.1 few secondary structure elements › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › FeS 0.86 78.0 7.19e-01 98.2% 85.7%
4973847 3858.1.1.1 few secondary structure elements › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › FeS 0.86 77.0 7.58e-01 98.2% 91.7%
4982390 3858.1.1.1 few secondary structure elements › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit › FeS 0.86 78.0 6.88e-01 100.0% 75.0%
3949518 2003.1.5.80 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 0.56 46.0 3.02e-01 98.2% 25.4%
3411579 601.19.1.0 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein 0.53 43.0 2.98e-01 100.0% 73.9%
4297406 601.1.2.81 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Serinc 0.51 36.0 2.79e-01 80.4% 53.1%
D2 medium residues 72-147
PDB
Domain cluster: representative
Pfam (7)
AccessionNameScoreE-valueQ covHMM cov
PF14697.12 best Fer4_21 69.4 3.30e-19 72.4% 100.0%
PF13237.12 Fer4_10 25.7 1.30e-05 65.8% 96.2%
PF12837.13 Fer4_6 24.6 2.40e-05 31.6% 87.5%
PF00037.33 Fer4 29.9 4.70e-07 31.6% 91.7%
PF00037.33 Fer4 24.1 3.30e-05 31.6% 95.8%
PF12800.13 Fer4_4 21.7 2.50e-04 22.4% 88.2%
PF12800.13 Fer4_4 15.1 3.50e-02 22.4% 88.2%
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8oh9B05 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.91 68.0 7.62e-01 77.6% 100.0%
7bkea01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.89 65.0 6.61e-01 75.0% 81.1%
6tmfd01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.89 66.0 6.96e-01 77.6% 100.0%
1jnrB01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.88 66.0 7.06e-01 77.6% 100.0%
1xerA00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.86 64.0 5.72e-01 77.6% 65.0%
2c42A05 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.84 67.0 5.71e-01 84.2% 78.6%
5c4iB02 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.84 64.0 7.06e-01 81.6% 100.0%
2v4jB03 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.82 59.0 6.33e-01 75.0% 100.0%
1gteA01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.81 75.0 6.55e-01 98.7% 68.8%
4id8A00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.81 61.0 6.59e-01 78.9% 100.0%
1vjwA00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.80 58.0 6.56e-01 76.3% 100.0%
1fxrA00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.80 60.0 6.55e-01 78.9% 98.4%
1jb0C00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.80 65.0 6.41e-01 86.8% 91.3%
1iqzA00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.80 62.0 6.07e-01 81.6% 90.1%
8a5eD01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.78 59.0 5.83e-01 78.9% 92.4%
2pa8D03 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.75 54.0 6.01e-01 81.6% 100.0%
7z0sF01 3.30.70.3270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 67.0 5.14e-01 97.4% 47.2%
4omfG02 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 54.0 5.55e-01 84.2% 81.9%
3i9v900 3.30.70.3270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 62.0 4.86e-01 97.4% 59.1%
2vpzB01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 55.0 4.59e-01 92.1% 88.9%
1ti2B01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 54.0 4.49e-01 92.1% 94.7%
4oj3B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 49.0 4.64e-01 89.5% 90.5%
1x31C02 3.30.70.1520 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Heterotetrameric sarcosine oxidase 0.61 46.0 4.53e-01 80.3% 100.0%
3r8yA01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.61 47.0 4.97e-01 90.8% 98.5%
3mgjA00 3.30.70.2690 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain 0.59 46.0 4.34e-01 86.8% 92.7%
5ekcF01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.59 48.0 3.38e-01 96.1% 69.3%
4rr5A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.59 44.0 4.67e-01 81.6% 100.0%
3m4xA01 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.58 45.0 4.35e-01 92.1% 73.9%
1h3dA03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 43.0 4.56e-01 82.9% 97.0%
3im8A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.58 44.0 4.51e-01 84.2% 95.9%
2ee0A01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.57 43.0 3.98e-01 81.6% 91.0%
1konA03 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.57 43.0 4.34e-01 82.9% 88.0%
2aj0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 41.0 4.28e-01 80.3% 94.4%
3ahpA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 47.0 4.27e-01 96.1% 88.7%
1wf1A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 40.0 3.83e-01 76.3% 80.0%
1cpzA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 40.0 4.14e-01 75.0% 98.5%
3trgA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 44.0 4.24e-01 92.1% 92.6%
2jsxA01 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.56 40.0 4.13e-01 77.6% 98.6%
1zpwX00 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 45.0 4.45e-01 90.8% 100.0%
2llzA01 3.30.70.2360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 41.0 3.96e-01 82.9% 92.2%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 39.0 3.95e-01 76.3% 91.9%
1qfoC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 3.68e-01 84.2% 88.6%
2qmwA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 40.0 3.99e-01 80.3% 100.0%
7vxrA01 3.40.800.10 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain 0.54 40.0 3.78e-01 84.2% 68.4%
3tmaA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.54 41.0 3.36e-01 85.5% 53.5%
1d5aA03 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.54 40.0 3.26e-01 84.2% 81.1%
2fphX02 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 39.0 3.80e-01 80.3% 87.5%
2mzsA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 39.0 3.73e-01 84.2% 81.8%
5yjlB01 3.30.460.30 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Glutamyl-tRNA reductase, N-terminal domain 0.53 42.0 3.40e-01 90.8% 85.1%
1wwhA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 38.0 3.87e-01 78.9% 100.0%
1a7gE00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 43.0 4.26e-01 94.7% 100.0%
4i0wA00 3.30.70.2980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 42.0 3.99e-01 92.1% 80.4%
3ajdA01 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.52 38.0 4.07e-01 78.9% 100.0%
1ra6A02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.52 38.0 3.49e-01 81.6% 85.8%
1x4hA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 41.0 3.71e-01 90.8% 85.6%
1a4aA00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.51 36.0 3.15e-01 77.6% 85.3%
1x4dA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.50 40.0 3.76e-01 93.4% 80.4%
1xa3A02 3.30.1540.10 Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › formyl-coa transferase, domain 3 0.50 37.0 3.48e-01 82.9% 78.6%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4145835 205.1.1.39 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_21 0.96 84.0 8.02e-01 90.8% 85.9%
4205471 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.95 84.0 7.79e-01 90.8% 80.0%
4206419 205.1.1.39 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_21 0.93 79.0 8.31e-01 88.2% 95.7%
5080042 205.1.1.0 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.93 71.0 6.98e-01 78.9% 78.8%
5065231 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.92 74.0 6.88e-01 85.5% 70.0%
5068619 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.92 68.0 7.71e-01 76.3% 100.0%
5031330 205.1.1.131 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.91 68.0 6.92e-01 77.6% 84.0%
5079392 205.1.1.16 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.91 68.0 7.16e-01 77.6% 84.3%
5052761 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.91 68.0 6.92e-01 77.6% 78.7%
3098235 205.1.1.39 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_21 0.90 64.0 7.33e-01 73.7% 100.0%
4945957 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.89 65.0 7.38e-01 75.0% 100.0%
5063479 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.89 68.0 5.83e-01 78.9% 81.8%
5026942 205.1.1.16 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.89 73.0 7.86e-01 90.8% 100.0%
4316234 205.1.1.79 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, DUF3470, Fer4_9 0.89 66.0 5.82e-01 77.6% 56.2%
4511446 205.1.1.0 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.89 66.0 5.82e-01 77.6% 56.2%
4987207 205.1.1.131 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.88 65.0 7.37e-01 76.3% 100.0%
2884800 205.1.1.33 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.88 66.0 5.79e-01 77.6% 83.8%
5044610 205.1.1.33 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.88 68.0 6.88e-01 80.3% 81.3%
4967803 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.88 67.0 5.08e-01 80.3% 56.4%
4958021 205.1.1.33 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.87 67.0 6.96e-01 80.3% 88.6%
5015544 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.87 70.0 5.41e-01 84.2% 43.3%
3838806 205.1.1.39 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_21 0.87 68.0 6.60e-01 82.9% 77.4%
4992188 205.1.1.33 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.87 67.0 6.12e-01 80.3% 93.7%
4205556 205.1.1.39 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_21 0.87 83.0 7.62e-01 100.0% 81.7%
5034170 205.1.1.33 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.86 68.0 7.07e-01 82.9% 90.0%
5001573 205.1.1.16 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.86 60.0 6.99e-01 72.4% 100.0%
4977851 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.86 73.0 7.04e-01 89.5% 80.0%
5032771 205.1.1.16 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.86 64.0 7.10e-01 78.9% 98.3%
5055180 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.86 65.0 7.03e-01 78.9% 92.3%
5069696 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.86 74.0 7.68e-01 94.7% 98.6%
5051963 205.1.1.131 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.86 73.0 7.36e-01 90.8% 98.7%
5006821 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.85 80.0 6.11e-01 100.0% 71.9%
4569971 205.1.1.41 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_10 0.85 70.0 6.39e-01 85.5% 94.7%
4101134 205.1.1.82 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_6, Fer4_10 0.85 60.0 6.91e-01 73.7% 100.0%
4070160 205.1.1.39 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_21 0.85 68.0 6.14e-01 84.2% 64.0%
3965448 205.1.1.39 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_21 0.85 82.0 6.89e-01 100.0% 70.4%
5007687 205.1.1.131 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.85 64.0 6.49e-01 78.9% 80.0%
5052593 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.85 64.0 6.32e-01 78.9% 75.0%
4950081 205.1.1.33 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.85 64.0 6.31e-01 78.9% 75.0%
None 0.85 67.0 6.81e-01 84.2% 85.3%
3968114 205.1.1.35 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4+Fer4_7 0.84 71.0 7.17e-01 88.2% 100.0%
5041676 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.84 65.0 6.97e-01 84.2% 93.8%
4940346 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.84 65.0 6.38e-01 80.3% 78.8%
3602472 205.1.1.39 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_21 0.84 66.0 7.11e-01 82.9% 96.9%
5015545 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.84 67.0 6.16e-01 84.2% 70.5%
5007170 205.1.1.33 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.84 58.0 6.77e-01 72.4% 100.0%
3602748 205.1.1.40 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_9 0.84 67.0 6.15e-01 84.2% 69.5%
5074737 205.1.1.0 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.84 62.0 6.90e-01 77.6% 98.3%
5009496 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.83 63.0 7.04e-01 78.9% 100.0%
4957212 205.1.1.0 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.83 68.0 6.89e-01 86.8% 98.7%
5002177 205.1.1.131 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.83 62.0 6.25e-01 77.6% 78.7%
4956363 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.83 66.0 6.75e-01 84.2% 87.7%
5002010 205.1.1.131 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.82 64.0 6.15e-01 81.6% 75.3%
5023816 205.1.1.16 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.82 67.0 6.04e-01 85.5% 66.0%
5074451 205.1.1.16 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.82 57.0 6.59e-01 72.4% 100.0%
5015539 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.82 65.0 7.01e-01 84.2% 98.5%
5051367 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.82 77.0 5.53e-01 100.0% 80.5%
4864813 205.1.1.41 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_10 0.81 68.0 6.59e-01 88.2% 81.0%
None 0.81 61.0 6.76e-01 80.3% 100.0%
4973109 205.1.1.131 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.81 61.0 6.79e-01 80.3% 100.0%
5066467 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.81 76.0 6.30e-01 100.0% 85.6%
5075436 205.1.1.0 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.81 63.0 6.10e-01 82.9% 89.4%
4186303 205.1.1.40 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_9 0.81 71.0 6.41e-01 93.4% 99.0%
4976660 205.1.1.33 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.80 59.0 6.58e-01 77.6% 100.0%
4656260 205.1.1.41 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_10 0.80 56.0 6.42e-01 73.7% 100.0%
4119126 205.1.1.39 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_21 0.80 64.0 6.34e-01 84.2% 80.0%
4971655 205.1.1.0 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.80 67.0 6.60e-01 89.5% 83.7%
4983948 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.80 70.0 6.95e-01 94.7% 89.9%
4971561 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.80 60.0 6.62e-01 78.9% 100.0%
4986114 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.80 60.0 6.43e-01 78.9% 93.8%
5075506 205.1.1.33 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.80 65.0 6.42e-01 86.8% 83.7%
3602398 205.1.1.39 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_21 0.79 63.0 6.58e-01 84.2% 92.9%
5036190 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.79 63.0 5.95e-01 85.5% 71.1%
4619118 205.1.1.35 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4+Fer4_7 0.79 69.0 6.33e-01 94.7% 99.0%
5023271 205.1.1.131 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.79 62.0 6.60e-01 82.9% 100.0%
4930867 205.1.1.131 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.79 63.0 6.76e-01 86.8% 100.0%
4932877 205.1.1.16 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.79 69.0 5.33e-01 96.1% 98.2%
4953600 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.79 63.0 6.57e-01 85.5% 94.3%
5003802 205.1.1.16 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.78 61.0 6.67e-01 88.2% 100.0%
5051104 205.1.1.131 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.78 70.0 5.09e-01 94.7% 94.6%
5048965 205.1.1.33 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.77 60.0 5.97e-01 82.9% 80.0%
3602749 205.1.1.35 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4+Fer4_7 0.77 64.0 6.51e-01 89.5% 98.7%
4952723 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.77 67.0 4.60e-01 93.4% 67.9%
4938425 205.1.1.33 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.77 62.0 6.65e-01 90.8% 100.0%
4938499 205.1.1.131 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.77 63.0 4.79e-01 86.8% 78.2%
5042473 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.77 67.0 5.34e-01 96.1% 58.4%
4952610 205.1.1.22 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.76 60.0 6.12e-01 84.2% 88.0%
3603391 205.1.1.15 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_6 0.76 59.0 6.17e-01 82.9% 94.3%
5065522 205.1.1.0 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.76 63.0 6.53e-01 89.5% 100.0%
4960182 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.76 67.0 5.45e-01 96.1% 63.7%
5011812 205.1.1.8 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › ETF_QO 0.75 59.0 5.59e-01 84.2% 82.2%
4987468 205.1.1.33 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.75 56.0 5.57e-01 78.9% 75.0%
2848519 296.1.1.1 a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › NIR_SIR 0.75 69.0 4.95e-01 100.0% 62.0%
5016599 205.1.1.28 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_5 0.75 66.0 4.66e-01 93.4% 99.0%
3602579 205.1.1.39 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_21 0.75 56.0 5.81e-01 78.9% 87.1%
4320658 205.1.1.0 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.74 57.0 6.12e-01 84.2% 100.0%
4996658 205.1.1.131 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 0.73 65.0 6.62e-01 97.4% 98.6%
4943254 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.73 63.0 5.07e-01 96.1% 58.4%
5083267 205.1.1.33 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 0.73 59.0 4.62e-01 86.8% 85.2%
D3 medium residues 148-209
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4o6mA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.64 50.0 3.52e-01 85.5% 33.3%
4cjxA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.52 35.0 3.19e-01 82.3% 50.6%