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CAKLQF020000025.1__CAH1092165.1__SAMEA5780031_03509__00046
Bact-VirCAKLQF020000025.1__CAH1092165.1__SAMEA5780031_03509__00046
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-126_427-436
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00449.27 best | Urease_alpha | 182.4 | 4.90e-54 | 86.4% | 96.7% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e9yB01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.98 | 96.0 | 8.26e-01 | 100.0% | 74.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4510422 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 1.00 | 98.0 | 6.11e-01 | 100.0% | 76.8% |
| 4159710 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 1.00 | 98.0 | 6.14e-01 | 100.0% | 80.2% |
| None | — | 1.00 | 98.0 | 6.14e-01 | 100.0% | 80.2% | |
| None | — | 1.00 | 90.0 | 8.48e-01 | 91.7% | 82.7% | |
| 4062168 | 65.1.1.1 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Urease_alpha | 0.99 | 98.0 | 8.24e-01 | 100.0% | 74.9% |
| 4597933 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.99 | 97.0 | 6.12e-01 | 100.0% | 79.0% |
| None | — | 0.99 | 92.0 | 9.26e-01 | 97.0% | 95.4% | |
| 4667963 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.97 | 94.0 | 8.43e-01 | 100.0% | 76.5% |
| 4644031 | 65.1.1.1 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Urease_alpha | 0.96 | 64.0 | 7.92e-01 | 78.8% | 100.0% |
| 3333738 | 65.1.1.1 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Urease_alpha | 0.95 | 88.0 | 8.91e-01 | 97.0% | 96.2% |
| 3290721 | 65.1.1.1 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Urease_alpha | 0.91 | 64.0 | 6.80e-01 | 89.4% | 79.2% |
D2
medium
residues 129-195_503-516
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01979.27 best | Amidohydro_1 | 54.2 | 1.90e-14 | 98.8% | 24.1% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a5kC02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 1.00 | 98.0 | 5.97e-01 | 100.0% | 86.6% |
| 2gduA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.65 | 57.0 | 3.78e-01 | 100.0% | 47.0% |
| 4aefA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 55.0 | 3.59e-01 | 100.0% | 62.8% |
| 8j50A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 54.0 | 3.63e-01 | 100.0% | 53.9% |
| 3weoA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 52.0 | 3.47e-01 | 100.0% | 70.5% |
| 5i0fB03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 52.0 | 3.42e-01 | 100.0% | 49.3% |
| 2j6vA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.59 | 52.0 | 3.65e-01 | 100.0% | 70.0% |
| 2xvlA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 52.0 | 3.41e-01 | 100.0% | 59.7% |
| 6hxqA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 50.0 | 4.38e-01 | 96.3% | 89.1% |
| 1ccwB01 | 3.20.20.240 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Methylmalonyl-CoA mutase | 0.59 | 51.0 | 3.29e-01 | 100.0% | 67.9% |
| 2f2hA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 50.0 | 3.34e-01 | 100.0% | 55.5% |
| 1q6oB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 51.0 | 3.81e-01 | 100.0% | 39.1% |
| 3lupA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 51.0 | 4.14e-01 | 100.0% | 94.8% |
| 5u9cC02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.57 | 35.0 | 3.63e-01 | 71.6% | 64.9% |
| 5k9xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 48.0 | 3.42e-01 | 100.0% | 39.5% |
| 3l6eA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 47.0 | 3.59e-01 | 100.0% | 90.0% |
| 1k4kB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 49.0 | 3.62e-01 | 100.0% | 45.1% |
| 6dntA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.53 | 33.0 | 3.09e-01 | 75.3% | 48.1% |
| 2im5A00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.53 | 44.0 | 2.94e-01 | 98.8% | 76.1% |
| 3lxqA02 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.52 | 45.0 | 3.15e-01 | 100.0% | 62.7% |
| 1f2uB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 40.0 | 3.41e-01 | 92.6% | 48.3% |
| 2i09A01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.51 | 44.0 | 3.11e-01 | 100.0% | 51.6% |
| 3aayA02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.51 | 38.0 | 3.29e-01 | 81.5% | 79.4% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 1.00 | 97.0 | 5.64e-01 | 100.0% | 67.5% | |
| 4928037 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 1.00 | 91.0 | 5.44e-01 | 93.8% | 82.0% |
| 4159710 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 1.00 | 97.0 | 5.62e-01 | 100.0% | 67.5% |
| 4597933 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 1.00 | 97.0 | 5.65e-01 | 100.0% | 66.4% |
| None | — | 0.99 | 97.0 | 5.88e-01 | 100.0% | 87.2% | |
| None | — | 0.99 | 97.0 | 5.90e-01 | 100.0% | 84.5% | |
| 4510422 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.99 | 96.0 | 5.55e-01 | 100.0% | 68.8% |
| 4045512 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.99 | 96.0 | 5.85e-01 | 100.0% | 86.2% |
| None | — | 0.98 | 95.0 | 5.76e-01 | 100.0% | 81.6% | |
| 4537443 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.98 | 95.0 | 5.68e-01 | 100.0% | 79.0% |
| 3372258 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.95 | 91.0 | 6.13e-01 | 100.0% | 84.6% |
| 3958003 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.84 | 82.0 | 5.92e-01 | 100.0% | 59.8% |
| None | — | 0.84 | 82.0 | 5.98e-01 | 100.0% | 61.7% | |
| 4138936 | 2002.1.1.4 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase | 0.64 | 56.0 | 3.67e-01 | 100.0% | 60.0% |
| 3877774 | 2002.1.1.7 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.63 | 54.0 | 3.63e-01 | 100.0% | 50.4% |
| 3457741 | 2002.1.1.45 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_31_2nd | 0.59 | 50.0 | 3.32e-01 | 100.0% | 62.1% |
| 5081020 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.57 | 49.0 | 3.62e-01 | 100.0% | 40.4% |
| 4033138 | 2004.1.1.32 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,UvrB | 0.56 | 41.0 | 2.88e-01 | 77.8% | 32.9% |
| 3198641 | 7574.1.1.4 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › POR_N | 0.54 | 46.0 | 3.35e-01 | 100.0% | 50.0% |
D3
medium
residues 196-355
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01979.27 best | Amidohydro_1 | 113.5 | 1.90e-32 | 100.0% | 43.2% |
CATH (71)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a5kC02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.99 | 97.0 | 6.95e-01 | 100.0% | 42.0% |
| 5z5cA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 36.0 | 4.39e-01 | 86.9% | 73.1% |
| 1kcxA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.70 | 66.0 | 4.90e-01 | 100.0% | 50.4% |
| 2rdxA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.70 | 52.0 | 4.51e-01 | 100.0% | 51.9% |
| 1xrtA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.69 | 55.0 | 4.65e-01 | 100.0% | 52.1% |
| 5ybwA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.68 | 36.0 | 4.52e-01 | 76.2% | 82.7% |
| 1v77A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.68 | 53.0 | 4.85e-01 | 100.0% | 63.9% |
| 2ovlA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.67 | 52.0 | 4.56e-01 | 100.0% | 55.7% |
| 2qdeA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.67 | 51.0 | 4.43e-01 | 100.0% | 53.1% |
| 5b1hA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 36.0 | 4.43e-01 | 76.2% | 82.4% |
| 2ps2A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.66 | 50.0 | 4.33e-01 | 100.0% | 52.1% |
| 3msyA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.66 | 51.0 | 4.44e-01 | 100.0% | 54.4% |
| 1p1mA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.66 | 54.0 | 4.42e-01 | 100.0% | 49.1% |
| 2hzgA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.66 | 52.0 | 4.45e-01 | 100.0% | 53.2% |
| 3ro6A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.65 | 50.0 | 4.35e-01 | 100.0% | 53.3% |
| 1tqxA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 50.0 | 4.46e-01 | 100.0% | 58.8% |
| 2i5qA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.63 | 51.0 | 4.43e-01 | 100.0% | 56.4% |
| 4g2dA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.62 | 57.0 | 4.54e-01 | 100.0% | 53.8% |
| 4i3gA01 | 3.20.20.300 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain | 0.62 | 51.0 | 3.95e-01 | 87.5% | 79.9% |
| 2imrA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.62 | 56.0 | 4.55e-01 | 100.0% | 64.1% |
| 2zc1A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.62 | 56.0 | 4.43e-01 | 100.0% | 51.7% |
| 1k70A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.61 | 56.0 | 4.53e-01 | 100.0% | 65.8% |
| 3ls9A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 56.0 | 4.40e-01 | 100.0% | 49.7% |
| 1bf6A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 56.0 | 4.54e-01 | 100.0% | 69.1% |
| 3n05A02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 40.0 | 3.77e-01 | 86.3% | 55.6% |
| 3e0lA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 56.0 | 4.44e-01 | 100.0% | 67.6% |
| 4v1xA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 55.0 | 4.22e-01 | 100.0% | 47.5% |
| 3pnzA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 56.0 | 4.33e-01 | 100.0% | 53.2% |
| 2w9mA05 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 49.0 | 4.29e-01 | 100.0% | 57.4% |
| 1n7kA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 49.0 | 4.28e-01 | 100.0% | 59.4% |
| 5v1qB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 54.0 | 4.45e-01 | 100.0% | 55.6% |
| 1s2uB00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.59 | 51.0 | 4.18e-01 | 100.0% | 51.2% |
| 1qwgA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 50.0 | 4.28e-01 | 100.0% | 57.8% |
| 1yx1A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.58 | 52.0 | 4.46e-01 | 100.0% | 61.6% |
| 1jpdX02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.58 | 50.0 | 4.59e-01 | 100.0% | 71.0% |
| 6w6aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 52.0 | 4.44e-01 | 100.0% | 61.0% |
| 3nl6C02 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.57 | 51.0 | 4.17e-01 | 96.2% | 87.4% |
| 3cqjA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.57 | 53.0 | 4.39e-01 | 100.0% | 61.6% |
| 3cz8A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 52.0 | 4.55e-01 | 100.0% | 83.3% |
| 3r89A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 52.0 | 4.30e-01 | 100.0% | 68.2% |
| 2bb0A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.57 | 52.0 | 4.25e-01 | 100.0% | 59.7% |
| 2q09A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.57 | 52.0 | 4.24e-01 | 100.0% | 94.3% |
| 1vypX00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 51.0 | 3.97e-01 | 100.0% | 75.1% |
| 1mi3A00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.57 | 52.0 | 4.13e-01 | 100.0% | 59.6% |
| 3i4kA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 51.0 | 4.35e-01 | 100.0% | 61.9% |
| 2p8bA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 50.0 | 4.41e-01 | 100.0% | 66.0% |
| 3cyjA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 48.0 | 4.25e-01 | 100.0% | 62.9% |
| 3mwcA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 50.0 | 4.26e-01 | 100.0% | 60.9% |
| 2chrA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 50.0 | 4.65e-01 | 100.0% | 77.2% |
| 1dtnA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 49.0 | 4.39e-01 | 100.0% | 67.0% |
| 3nzpB02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.56 | 51.0 | 4.29e-01 | 99.4% | 65.2% |
| 2nqlA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 49.0 | 4.45e-01 | 100.0% | 69.5% |
| 2oqhA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 51.0 | 4.43e-01 | 100.0% | 65.4% |
| 1v1aA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 51.0 | 4.12e-01 | 100.0% | 88.0% |
| 3n4fA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.55 | 50.0 | 4.28e-01 | 100.0% | 75.7% |
| 3ugvA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.55 | 50.0 | 4.41e-01 | 100.0% | 67.4% |
| 1tkkA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.55 | 50.0 | 4.32e-01 | 100.0% | 64.3% |
| 3vc5A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.55 | 51.0 | 4.39e-01 | 100.0% | 69.1% |
| 1rvkA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.55 | 50.0 | 4.24e-01 | 100.0% | 64.0% |
| 1gkpA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.55 | 50.0 | 3.84e-01 | 100.0% | 47.3% |
| 2pgwA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.54 | 47.0 | 4.28e-01 | 100.0% | 69.2% |
| 3i45A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 42.0 | 4.04e-01 | 80.6% | 84.4% |
| 4u5qB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 49.0 | 3.61e-01 | 100.0% | 84.0% |
| 4tv5A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.54 | 49.0 | 4.27e-01 | 100.0% | 73.1% |
| 3h49B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 50.0 | 4.00e-01 | 100.0% | 88.3% |
| 3drwB01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 49.0 | 3.83e-01 | 100.0% | 94.9% |
| 5xmvA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 44.0 | 3.75e-01 | 91.9% | 62.0% |
| 5ot1A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 47.0 | 3.62e-01 | 100.0% | 46.8% |
| 1r6xA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 38.0 | 3.46e-01 | 76.9% | 90.1% |
| 7yjmB01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 44.0 | 3.84e-01 | 92.5% | 67.6% |
| 1sfsA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 45.0 | 4.17e-01 | 100.0% | 83.6% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 1.00 | 98.0 | 6.93e-01 | 100.0% | 40.1% | |
| None | — | 1.00 | 69.0 | 6.49e-01 | 70.0% | 61.2% | |
| 4159710 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 1.00 | 98.0 | 6.40e-01 | 100.0% | 29.4% |
| None | — | 1.00 | 98.0 | 6.39e-01 | 100.0% | 29.4% | |
| 4045512 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 1.00 | 86.0 | 6.10e-01 | 100.0% | 35.9% |
| None | — | 1.00 | 97.0 | 6.81e-01 | 100.0% | 38.5% | |
| 4510422 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.99 | 98.0 | 6.33e-01 | 100.0% | 28.3% |
| 4597933 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.99 | 86.0 | 5.64e-01 | 100.0% | 26.7% |
| 4537443 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.99 | 86.0 | 5.91e-01 | 100.0% | 32.3% |
| None | — | 0.99 | 98.0 | 6.96e-01 | 100.0% | 41.2% | |
| 4928037 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.98 | 85.0 | 5.86e-01 | 100.0% | 31.9% |
| 4649527 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.97 | 95.0 | 6.68e-01 | 100.0% | 38.6% |
| None | — | 0.97 | 95.0 | 6.48e-01 | 100.0% | 35.5% | |
| 3958003 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.92 | 67.0 | 6.28e-01 | 100.0% | 63.0% |
| 5027359 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.73 | 63.0 | 4.95e-01 | 100.0% | 46.2% |
| 4935010 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.71 | 51.0 | 4.28e-01 | 100.0% | 45.4% |
| 4992842 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.70 | 53.0 | 4.60e-01 | 97.5% | 53.2% |
| 4233094 | 2002.1.1.275 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, DHOase | 0.70 | 65.0 | 4.73e-01 | 100.0% | 39.5% |
| 163758 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.67 | 52.0 | 4.56e-01 | 100.0% | 55.7% |
| 4955792 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.66 | 50.0 | 4.42e-01 | 100.0% | 54.0% |
| 323231 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.66 | 50.0 | 4.28e-01 | 100.0% | 49.0% |
| 4962099 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.65 | 50.0 | 4.17e-01 | 100.0% | 46.4% |
| 4234659 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.65 | 35.0 | 3.53e-01 | 76.2% | 50.9% |
| 1684449 | 2002.1.1.88 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PTE | 0.63 | 59.0 | 4.61e-01 | 100.0% | 51.8% |
| 3227633 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.63 | 51.0 | 4.05e-01 | 85.6% | 76.2% |
| 4522690 | 2002.1.1.132 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GcpE | 0.62 | 53.0 | 4.44e-01 | 100.0% | 55.0% |
| 5061803 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.61 | 51.0 | 4.50e-01 | 100.0% | 61.1% |
| 5077497 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.60 | 56.0 | 4.13e-01 | 100.0% | 40.5% |
| 3784194 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.60 | 49.0 | 3.99e-01 | 87.5% | 72.6% |
| 4067586 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.60 | 52.0 | 3.79e-01 | 100.0% | 34.3% |
| 4971945 | 2002.1.1.457 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF6282 | 0.58 | 54.0 | 4.35e-01 | 100.0% | 62.3% |
| 5023715 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.58 | 54.0 | 4.60e-01 | 100.0% | 69.8% |
| 3954712 | 2002.1.1.75 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C | 0.58 | 40.0 | 3.73e-01 | 70.0% | 61.5% |
| 5075246 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.58 | 48.0 | 4.44e-01 | 89.4% | 68.6% |
| 4538934 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.58 | 53.0 | 4.26e-01 | 100.0% | 58.7% |
| 4114431 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.57 | 53.0 | 3.92e-01 | 100.0% | 45.3% |
| 4089616 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.57 | 52.0 | 4.23e-01 | 100.0% | 62.7% |
| 4366464 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.57 | 52.0 | 4.19e-01 | 100.0% | 57.7% |
| 4467884 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.57 | 52.0 | 4.22e-01 | 100.0% | 60.3% |
| 3960866 | 7512.1.1.31 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 | 0.56 | 42.0 | 4.35e-01 | 78.1% | 81.9% |
| 4970879 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.56 | 50.0 | 4.18e-01 | 100.0% | 56.0% |
| 4201796 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.56 | 52.0 | 4.21e-01 | 100.0% | 62.7% |
| 5056172 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.56 | 41.0 | 4.01e-01 | 76.9% | 97.2% |
| 3682502 | 2002.1.1.101 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N | 0.56 | 51.0 | 4.15e-01 | 100.0% | 67.0% |
| 4513736 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.56 | 49.0 | 4.29e-01 | 100.0% | 63.1% |
| 3815492 | 2003.1.5.121 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF1442 | 0.55 | 36.0 | 3.29e-01 | 76.2% | 50.0% |
| 4961401 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.55 | 50.0 | 4.16e-01 | 100.0% | 59.6% |
| 1311209 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.55 | 48.0 | 3.96e-01 | 96.2% | 84.7% |
| 5033411 | 2002.1.1.4 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase | 0.54 | 49.0 | 3.74e-01 | 100.0% | 63.4% |
| 4979885 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.54 | 49.0 | 4.00e-01 | 100.0% | 87.7% |
| 4165287 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.54 | 42.0 | 3.90e-01 | 81.9% | 81.5% |
| 4973160 | 7512.1.1.8 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 | 0.53 | 44.0 | 3.91e-01 | 88.7% | 78.3% |
| 4225706 | 2002.1.1.4 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase | 0.52 | 48.0 | 3.64e-01 | 100.0% | 66.1% |
| 3520864 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.52 | 33.0 | 3.95e-01 | 88.7% | 96.2% |
| 3696887 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.52 | 48.0 | 4.00e-01 | 100.0% | 89.3% |
| 4635420 | 2002.1.1.267 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Enolase_C, MAAL_C | 0.52 | 47.0 | 3.79e-01 | 100.0% | 65.1% |
| 4523185 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.51 | 41.0 | 4.16e-01 | 84.4% | 91.9% |
| 3836438 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.51 | 40.0 | 2.98e-01 | 80.6% | 72.3% |
| 5022820 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.51 | 41.0 | 3.79e-01 | 83.1% | 93.5% |
| 1194084 | 7577.1.1.5 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › SHMT | 0.51 | 44.0 | 3.73e-01 | 93.1% | 56.3% |
| 4112713 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.51 | 40.0 | 2.98e-01 | 83.1% | 75.8% |
| 4382789 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.51 | 36.0 | 3.28e-01 | 73.1% | 75.9% |
| 5040513 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.50 | 46.0 | 3.76e-01 | 100.0% | 81.7% |
D4
medium
residues 533-561
Domain cluster:
representative